File: otbStreamingImageToOGRLayerSegmentationFilter.h

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/*=========================================================================

  Program:   ORFEO Toolbox
  Language:  C++
  Date:      $Date$
  Version:   $Revision$


  Copyright (c) Centre National d'Etudes Spatiales. All rights reserved.
  See OTBCopyright.txt for details.

  Some parts of this code are derived from ITK. See ITKCopyright.txt
  for details.


     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef otbStreamingImageToOGRLayerSegmentationFilter_h
#define otbStreamingImageToOGRLayerSegmentationFilter_h

#include "itkExtractImageFilter.h"

#include "otbPersistentFilterStreamingDecorator.h"
#include "otbPersistentImageToOGRLayerFilter.h"
#include "otbRelabelComponentImageFilter.h"
#include "itkMultiplyImageFilter.h"
#include "otbLabeledOutputAccessor.h"

#include "otbMeanShiftSmoothingImageFilter.h"

namespace otb
{

/**
 * \class LabeledOutputAccessor
 * \brief Specialized class to get the index of the labeled output image in mean shift filter (new version).
 *
 * \ingroup OTBOGRProcessing
 */
template <class TInputImage, class TOutputImage, class TOutputImage2, class TKernelType>
class LabeledOutputAccessor<MeanShiftSmoothingImageFilter<TInputImage, TOutputImage, TOutputImage2, TKernelType> >
{
   public:
      typedef typename MeanShiftSmoothingImageFilter<TInputImage, TOutputImage, TOutputImage2, TKernelType>::OutputLabelImageType    LabelImageType;
      itkStaticConstMacro(LabeledOutputIndex, unsigned int, 0);
};

/** \class PersistentStreamingLabelImageToOGRDataFilter
 * \brief This filter is a framework for large scale segmentation.
 * For a detailed description @see StreamingImageToOGRLayerSegmentationFilter
 *
 * \ingroup OTBOGRProcessing
 */
template <class TImageType,  class TSegmentationFilter>
class PersistentImageToOGRLayerSegmentationFilter
  : public otb::PersistentImageToOGRLayerFilter<TImageType>
{
public:
  /** Standard Self typedef */
  typedef PersistentImageToOGRLayerSegmentationFilter      Self;
  typedef PersistentImageToOGRLayerFilter<TImageType>      Superclass;
  typedef itk::SmartPointer<Self>                          Pointer;
  typedef itk::SmartPointer<const Self>                    ConstPointer;

  typedef typename Superclass::InputImageType              InputImageType;
  typedef typename Superclass::InputImagePointer           InputImagePointerType;

  typedef TSegmentationFilter                              SegmentationFilterType;
  typedef typename LabeledOutputAccessor<SegmentationFilterType>::LabelImageType  LabelImageType;
  typedef typename LabelImageType::PixelType                                      LabelPixelType;

  typedef otb::LabelImageToOGRDataSourceFilter<LabelImageType>          LabelImageToOGRDataSourceFilterType;
  typedef typename Superclass::OGRDataSourceType                        OGRDataSourceType;
  typedef typename Superclass::OGRDataSourcePointerType                 OGRDataSourcePointerType;
  typedef typename Superclass::OGRLayerType                             OGRLayerType;

  typedef RelabelComponentImageFilter<LabelImageType,LabelImageType>    RelabelComponentImageFilterType;
  typedef itk::MultiplyImageFilter<LabelImageType,LabelImageType,LabelImageType>  MultiplyImageFilterType;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Runtime information support. */
  itkTypeMacro(PersistentImageToOGRLayerSegmentationFilter, PersistentImageToOGRLayerFilter);

  /** Return a pointer to the segmentation filter used. */
  itkGetObjectMacro(SegmentationFilter, SegmentationFilterType);

  itkSetStringMacro(FieldName);
  itkGetStringMacro(FieldName);

  /** Set the first Label value (default is 1). Incremental step is 1.*/
  void SetStartLabel(const LabelPixelType & label)
  {
     m_StartLabel = label;
     m_TileMaxLabel = label;
  }
  /** Return the first label value*/
  itkGetMacro(StartLabel, LabelPixelType);

  /**
   * Set the value of 8-connected neighborhood option used in \c LabelImageToOGRDataSourceFilter
   */
  itkSetMacro(Use8Connected, bool);
  /**
   * Get the value of 8-connected neighborhood option used in \c LabelImageToOGRDataSourceFilter
   */
  itkGetMacro(Use8Connected, bool);

  /** Set the option for filtering small objects. Default to false. */
  itkSetMacro(FilterSmallObject, bool);
  /** Return the value of filter small objects option.*/
  itkGetMacro(FilterSmallObject, bool);

  /** Set the minimum object size (in pixels) in case FilterSmallObject option is true.*/
  itkSetMacro(MinimumObjectSize, unsigned int);
  /** Get the minimum object size.*/
  itkGetMacro(MinimumObjectSize, unsigned int);

  /** Option for simplifying geometries. Default to false.*/
  itkSetMacro(Simplify, bool);
  itkGetMacro(Simplify, bool);

  /** Set the tolerance value for simplifying geometries.
   * \sa \c OGRGeometry::Simplify() \c OGRGeometry::SimplifyPreserveTopology()
   */
  itkSetMacro(SimplificationTolerance, double);
  /** Get the tolerance value for simplifying geometries.
   * \sa \c OGRGeometry::Simplify() \c OGRGeometry::SimplifyPreserveTopology()
   */
  itkGetMacro(SimplificationTolerance, double);

  /** Set/Get the input mask image.
   * All pixels in the mask with a value of 0 will not be considered
   * suitable for vectorization.
   */
  virtual void SetInputMask(const LabelImageType *mask);
  virtual const LabelImageType * GetInputMask(void);

protected:
  PersistentImageToOGRLayerSegmentationFilter();

  ~PersistentImageToOGRLayerSegmentationFilter() ITK_OVERRIDE;


private:
  PersistentImageToOGRLayerSegmentationFilter(const Self &); //purposely not implemented
  void operator =(const Self&); //purposely not implemented

  OGRDataSourcePointerType ProcessTile() ITK_OVERRIDE;


  int m_TileMaxLabel;
  LabelPixelType m_StartLabel;
  typename SegmentationFilterType::Pointer m_SegmentationFilter;

  std::string m_FieldName;

  unsigned int m_TileNumber;
  bool m_Use8Connected;
  bool m_FilterSmallObject;
  unsigned int m_MinimumObjectSize;
  bool m_Simplify;
  double m_SimplificationTolerance;


};

/** \class StreamingImageToOGRLayerSegmentationFilter
 * \brief This filter is a framework for large scale segmentation.
 * It is a persistent filter that process the input image tile by tile.
 * This filter is templated over the segmentation filter. This later is used to segment each tile of the input image.
 * Each segmentation result (for each tile) is then vectorized using \c LabelImageToOGRDataSourceFilter
 * (based on \c GDALPolygonize()).
 * The output \c OGRDataSource of the \c LabelImageToOGRDataSourceFilter is a "memory" DataSource
 * (ie all features of a tile are kept in memory). From here some optional processing can be done,
 * depending on input parameters :
 * - Simplify option : If set to true, the SimplificationTolerance parameter is used to simplify all geometries,
 * using the \c OGRGeometry::Simplify() method, based on Douglas-Peuker algorithm.
 * - FilterSmallObject option : if set to true, polygons with a size less than MinimumObjectSize (in pixels)
 * are discarded.
 * Finally all features contained in the "memory" DataSource are copied into the input Layer,
 * in the layer specified with the \c SetLayerName() method.
 *
 * \note The Use8Connected parameter can be turn on and it will be used in \c GDALPolygonize(). But be carreful, it
 * can create cross polygons !
 * \note The input mask can be used to exclude pixels from vectorization process.
 * All pixels with a value of 0 in the input mask image will not be suitable for vectorization.
 *
 * \ingroup OTBOGRProcessing
 */
template <class TImageType,  class TSegmentationFilter>
class ITK_EXPORT StreamingImageToOGRLayerSegmentationFilter :
public PersistentFilterStreamingDecorator<PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter> >
{

public:
  /** Standard Self typedef */
  typedef StreamingImageToOGRLayerSegmentationFilter Self;
  typedef PersistentFilterStreamingDecorator
  <PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter> >   Superclass;
  typedef itk::SmartPointer<Self>                                                    Pointer;
  typedef itk::SmartPointer<const Self>                                              ConstPointer;

  /** Type macro */
  itkNewMacro(Self);

  /** Creation through object factory macro */
  itkTypeMacro(StreamingImageToOGRLayerSegmentationFilter, PersistentFilterStreamingDecorator);

  typedef TSegmentationFilter                      SegmentationFilterType;
  typedef TImageType                               InputImageType;
  typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType,
               TSegmentationFilter>::LabelPixelType                           LabelPixelType;
  typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType,
               TSegmentationFilter>::LabelImageType                           LabelImageType;
  typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType,
               TSegmentationFilter>::OGRDataSourcePointerType                 OGRDataSourcePointerType;
  typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType,
               TSegmentationFilter>::OGRLayerType                             OGRLayerType;

  typedef typename InputImageType::SizeType                                   SizeType;

  /** Set the input image. */
  using Superclass::SetInput;
  void SetInput(InputImageType * input)
  {
    this->GetFilter()->SetInput(input);
  }
  const InputImageType * GetInput()
  {
    return this->GetFilter()->GetInput();
  }
  /** Set/Get the input mask image.
   * All pixels in the mask with a value of 0 will not be considered
   * suitable for vectorization.
   */
  void SetInputMask(LabelImageType * mask)
  {
    this->GetFilter()->SetInputMask(mask);
  }
  const LabelImageType * GetInputMask()
  {
    return this->GetFilter()->GetInputMask();
  }
  /** Set the \c ogr::Layer in which the layer LayerName will be created. */
  void SetOGRLayer( const OGRLayerType & ogrLayer )
  {
    this->GetFilter()->SetOGRLayer(ogrLayer);
  }

  void SetFieldName( const std::string & fieldName )
  {
    this->GetFilter()->SetFieldName(fieldName);
  }

  const std::string & GetFieldName() const
  {
    return this->GetFilter()->GetFieldName();
  }


  SegmentationFilterType * GetSegmentationFilter()
  {
     return this->GetFilter()->GetSegmentationFilter();
  }

  /** Set the first Label value (default is 1). Incremental step is 1.*/
  void SetStartLabel(const LabelPixelType & label)
  {
     this->GetFilter()->SetStartLabel(label);
  }
  /** Return the first label value*/
  const LabelPixelType & GetStartLabel()
  {
     return this->GetFilter()->GetStartLabel();
  }

  /** Retrieve the actual streamsize used */
  SizeType GetStreamSize()
  {
    return this->GetFilter()->GetStreamSize();
  }

  void Initialize()
  {
     this->GetFilter()->Initialize();
  }
  /**
   * Set the value of 8-connected neighborhood option used in \c LabelImageToOGRDataSourceFilter
   */
  void SetUse8Connected(bool flag)
  {
     this->GetFilter()->SetUse8Connected(flag);
  }

  bool GetUse8Connected()
  {
     return this->GetFilter()->GetUse8Connected();
  }
  /** Set the option for filtering small objects. Default to false. */
  void SetFilterSmallObject(bool flag)
  {
     this->GetFilter()->SetFilterSmallObject(flag);
  }

  bool GetFilterSmallObject()
  {
     return this->GetFilter()->GetFilterSmallObject();
  }
  /** Set the minimum object size (in pixels) in case FilterSmallObject option is true.*/
  void SetMinimumObjectSize(const unsigned int & size)
  {
     this->GetFilter()->SetMinimumObjectSize(size);
  }

  unsigned int GetMinimumObjectSize()
  {
     return this->GetFilter()->GetMinimumObjectSize();
  }
  /** Option for simplifying geometries. Default to false.*/
  void SetSimplify(bool flag)
  {
     this->GetFilter()->SetSimplify(flag);
  }

  bool GetSimplify()
  {
     return this->GetFilter()->GetSimplify();
  }
  /** Set the tolerance value for simplifying geometries.
   * \sa \c OGRGeometry::Simplify() \c OGRGeometry::SimplifyPreserveTopology()
   */
  void SetSimplificationTolerance(const double & tol)
  {
     this->GetFilter()->SetSimplificationTolerance(tol);
  }

  double GetSimplificationTolerance()
  {
     return this->GetFilter()->GetSimplificationTolerance();
  }

protected:
  /** Constructor */
  StreamingImageToOGRLayerSegmentationFilter() {}
  /** Destructor */
  ~StreamingImageToOGRLayerSegmentationFilter() ITK_OVERRIDE {}

private:
  StreamingImageToOGRLayerSegmentationFilter(const Self &); //purposely not implemented
  void operator =(const Self&); //purposely not implemented
};


}

#ifndef OTB_MANUAL_INSTANTIATION
#include "otbStreamingImageToOGRLayerSegmentationFilter.txx"
#endif

#endif