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/*
* Copyright (C) 1999-2011 Insight Software Consortium
* Copyright (C) 2005-2017 Centre National d'Etudes Spatiales (CNES)
*
* This file is part of Orfeo Toolbox
*
* https://www.orfeo-toolbox.org/
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
#ifndef otbRelabelComponentImageFilter_h
#define otbRelabelComponentImageFilter_h
#include "itkRelabelComponentImageFilter.h"
#include <vector>
namespace otb
{
/**
* \class RelabelComponentImageFilter
* \brief Relabel the components in an image such that consecutive labels are used.
*
* RelabelComponentImageFilter remaps the labels associated with the
* objects in an image (as from the output of
* ConnectedComponentImageFilter) such that the label numbers are
* consecutive with no gaps between the label numbers used. By
* default, the relabeling will also sort the labels based on the size
* of the object: the largest object will have label #1, the second
* largest will have label #2, etc.
*
* Label #0 is assumed to be background is left unaltered by the
* relabeling.
*
* RelabelComponentImageFilter is typically used on the output of the
* ConnectedComponentImageFilter for those applications that want to
* extract the largest object or the "k" largest objects. Any
* particular object can be extracted from the relabeled output using
* a BinaryThresholdImageFilter. A group of objects can be extracted
* from the relabled output using a ThresholdImageFilter.
*
* Once all the objects are relabeled, the application can query the
* number of objects and the size of each object. Object sizes are
* returned in a vector. The size of the background is not
* calculated. So the size of object #1 is
* GetSizeOfObjectsInPixels()[0], the size of object #2 is
* GetSizeOfObjectsInPixels()[1], etc.
*
* If user sets a minimum object size, all objects with fewer pixelss
* than the minimum will be discarded, so that the number of objects
* reported will be only those remaining. The
* GetOriginalNumberOfObjects method can be called to find out how
* many objects were present before the small ones were discarded.
*
* RelabelComponentImageFilter can be run as an "in place" filter,
* where it will overwrite its output. The default is run out of
* place (or generate a separate output). "In place" operation can be
* controlled via methods in the superclass,
* InPlaceImageFilter::InPlaceOn() and InPlaceImageFilter::InPlaceOff().
*
* \sa ConnectedComponentImageFilter, BinaryThresholdImageFilter, ThresholdImageFilter
*
* \ingroup Singlethreaded
*
* \ingroup OTBLabelling
*/
template <class TInputImage, class TOutputImage>
class ITK_EXPORT RelabelComponentImageFilter :
public itk::RelabelComponentImageFilter< TInputImage, TOutputImage >
{
public:
/**
* Standard "Self" & Superclass typedef.
*/
typedef RelabelComponentImageFilter Self;
typedef itk::RelabelComponentImageFilter < TInputImage, TOutputImage > Superclass;
/**
* Types from the Superclass
*/
typedef typename Superclass::InputImagePointer InputImagePointer;
/**
* Extract some information from the image types. Dimensionality
* of the two images is assumed to be the same.
*/
typedef typename TOutputImage::PixelType OutputPixelType;
typedef typename TOutputImage::InternalPixelType OutputInternalPixelType;
typedef typename TInputImage::PixelType InputPixelType;
typedef typename TInputImage::InternalPixelType InputInternalPixelType;
itkStaticConstMacro(ImageDimension, unsigned int,
TOutputImage::ImageDimension);
itkStaticConstMacro(InputImageDimension, unsigned int,
TInputImage::ImageDimension);
/**
* Image typedef support
*/
typedef TInputImage InputImageType;
typedef TOutputImage OutputImageType;
typedef typename TInputImage::IndexType IndexType;
typedef typename TInputImage::SizeType SizeType;
typedef typename TOutputImage::RegionType RegionType;
/**
* Smart pointer typedef support
*/
typedef itk::SmartPointer<Self> Pointer;
typedef itk::SmartPointer<const Self> ConstPointer;
/**
* Run-time type information (and related methods)
*/
itkTypeMacro(RelabelComponentImageFilter, ImageToImageFilter);
/**
* Method for creation through the object factory.
*/
itkNewMacro(Self);
/** Type used as identifier for the different component labels. */
typedef unsigned long int LabelType;
/** Type used to count number of pixels in objects. */
typedef unsigned long int ObjectSizeType;
protected:
RelabelComponentImageFilter();
virtual ~RelabelComponentImageFilter() {}
void GenerateInputRequestedRegion();
void EnlargeOutputRequestedRegion(itk::DataObject *){};
private:
RelabelComponentImageFilter(const Self&); //purposely not implemented
void operator=(const Self&); //purposely not implemented
};
} // end namespace otb
#ifndef ITK_MANUAL_INSTANTIATION
#include "otbRelabelComponentImageFilter.txx"
#endif
#endif
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