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/*
* Copyright (C) 2005-2020 Centre National d'Etudes Spatiales (CNES)
*
* This file is part of Orfeo Toolbox
*
* https://www.orfeo-toolbox.org/
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
#include "otbWrapperApplication.h"
#include "otbWrapperApplicationFactory.h"
#include "otbWaveletImageFilter.h"
#include "otbWaveletInverseImageFilter.h"
#include "otbWaveletGenerator.h"
#include <itkConfigure.h>
#include <itkForwardFFTImageFilter.h>
#include <itkInverseFFTImageFilter.h>
#include <itkFFTShiftImageFilter.h>
#include <itkFFTWGlobalConfiguration.h>
#include "otbFunctorImageFilter.h"
#include "otbComplexToVectorImageCastFilter.h"
namespace otb
{
namespace Wrapper
{
class DomainTransform : public Application
{
public:
/** Standard class typedefs. */
typedef DomainTransform Self;
typedef Application Superclass;
typedef itk::SmartPointer<Self> Pointer;
typedef itk::SmartPointer<const Self> ConstPointer;
typedef float InputPixelType;
typedef float OutputPixelType;
/** Standard macro */
itkNewMacro(Self);
itkTypeMacro(Self, otb::Application);
private:
DomainTransform()
{
}
~DomainTransform() override
{
}
void CleanupFFTWThreads()
{
// This is a trick to make sure fftw will cleanup its threads when application
// shared lib is released.
#if defined(ITK_USE_FFTWF)
fftwf_cleanup_threads();
fftwf_cleanup();
#endif
#if defined(ITK_USE_FFTWD)
fftw_cleanup_threads();
fftw_cleanup();
#endif
}
void DoInit() override
{
SetName("DomainTransform");
SetDescription("Domain Transform application for wavelet and fourier");
// Documentation
SetDocLongDescription("Domain Transform application for wavelet and fourier.");
SetDocLimitations("This application is not streamed, check your system resources when processing large images");
SetDocAuthors("OTB-Team");
SetDocSeeAlso("otbWaveletImageFilter, otbWaveletInverseImageFilter, otbWaveletTransform");
AddDocTag(Tags::Filter);
// Parameters
AddParameter(ParameterType_InputImage, "in", "Input Image");
SetParameterDescription("in",
"This will take an input image to be transformed"
" image. For FFT inverse transform, it expects a complex image as two-band"
" image in which the first band represents the real part and second band represents"
" the imaginary part.");
AddParameter(ParameterType_OutputImage, "out", "Output Image");
SetParameterDescription("out",
"This parameter holds the output file name to"
" which transformed image will be written. This has a slightly different"
" behaviour depending on transform type. \nFor Wavelet, output is a"
" single band image for both forward and inverse transform. For FFT"
" forward transform, output is two band image where first band represents"
" real part and second band represents imaginary part of a complex image.");
AddParameter(ParameterType_Choice, "mode", "Mode");
SetParameterDescription("mode",
"This parameter allows one to select between"
" fft(fourier) and wavelet");
AddChoice("mode.fft", "FFT transform");
SetParameterDescription("mode.fft", "FFT transform");
AddParameter(ParameterType_Bool, "mode.fft.shift", "Shift fft transform");
SetParameterDescription("mode.fft.shift", "Shift transform of fft filter");
AddChoice("mode.wavelet", "Wavelet");
SetParameterDescription("mode.wavelet", "Wavelet transform");
AddParameter(ParameterType_Choice, "mode.wavelet.form", "Select wavelet form");
AddChoice("mode.wavelet.form.haar", "HAAR");
AddChoice("mode.wavelet.form.db4", "DAUBECHIES4");
AddChoice("mode.wavelet.form.db6", "DAUBECHIES6");
AddChoice("mode.wavelet.form.db8", "DAUBECHIES8");
AddChoice("mode.wavelet.form.db12", "DAUBECHIES12");
AddChoice("mode.wavelet.form.db20", "DAUBECHIES20");
AddChoice("mode.wavelet.form.sb24", "SPLINE_BIORTHOGONAL_2_4");
AddChoice("mode.wavelet.form.sb44", "SPLINE_BIORTHOGONAL_4_4");
AddChoice("mode.wavelet.form.sym8", "SYMLET8");
// Default values for mode
SetParameterString("mode", "wavelet");
SetParameterString("mode.wavelet.form", "haar");
AddParameter(ParameterType_Choice, "direction", "Direction");
AddChoice("direction.forward", "Forward");
AddChoice("direction.inverse", "Inverse");
AddParameter(ParameterType_Int, "mode.wavelet.nlevels", "Number of decomposition levels");
SetParameterDescription("mode.wavelet.nlevels", "Number of decomposition levels");
SetDefaultParameterInt("mode.wavelet.nlevels", 2);
SetMinimumParameterIntValue("mode.wavelet.nlevels", 2);
AddRAMParameter();
SetDocExampleParameterValue("in", "input.tif");
SetDocExampleParameterValue("mode.wavelet.form", "haar");
SetDocExampleParameterValue("out", "output_wavelet_haar.tif");
SetOfficialDocLink();
}
void DoUpdateParameters() override
{
}
void DoExecute() override
{
int dir = GetParameterInt("direction");
int mode = GetParameterInt("mode");
if (dir != 0 && dir != 1)
{
itkExceptionMacro(<< "-dir is '" << dir << "'."
<< "It must be either 'forward' or 'inverse'");
}
if (mode != 0 && mode != 1)
{
itkExceptionMacro(<< "mode is '" << mode << "'."
<< "It must must be either 'fft' or 'wavelet'");
}
if (mode == 1)
{
int wavelet_type = GetParameterInt("mode.wavelet.form");
unsigned int nlevels = GetParameterInt("mode.wavelet.nlevels");
switch (wavelet_type)
{
case 0:
{
DoWaveletTransform<otb::Wavelet::HAAR>(dir, nlevels);
break;
}
case 1:
{
DoWaveletTransform<otb::Wavelet::DB4>(dir, nlevels);
break;
}
case 2:
{
DoWaveletTransform<otb::Wavelet::DB4>(dir, nlevels);
break;
}
case 3:
{
DoWaveletTransform<otb::Wavelet::DB6>(dir, nlevels);
break;
}
case 4:
{
DoWaveletTransform<otb::Wavelet::DB8>(dir, nlevels);
break;
}
case 5:
{
DoWaveletTransform<otb::Wavelet::DB12>(dir, nlevels);
break;
}
case 6:
{
DoWaveletTransform<otb::Wavelet::DB20>(dir, nlevels);
break;
}
case 7:
{
DoWaveletTransform<otb::Wavelet::SPLINE_BIORTHOGONAL_2_4>(dir, nlevels);
break;
}
case 8:
{
DoWaveletTransform<otb::Wavelet::SPLINE_BIORTHOGONAL_4_4>(dir, nlevels);
break;
}
case 9:
{
DoWaveletTransform<otb::Wavelet::SYMLET8>(dir, nlevels);
break;
}
default:
{
itkExceptionMacro(<< "Invalid wavelet type: '" << wavelet_type << "'");
break;
}
}
}
else
{
// fft ttransform
bool shift = GetParameterInt("mode.fft.shift");
typedef otb::Image<std::complex<OutputPixelType>> ComplexOutputImageType;
if (dir == 0)
{
// forward fft
typedef otb::Image<InputPixelType> TInputImage;
typedef TInputImage::Pointer TInputImagePointer;
// get input parameter as otb::Image<InputPixelType>
TInputImagePointer inImage = GetParameterImage<TInputImage>("in");
// typedef itk::::ForwardFFTImageFilter over otbImage< InputPixelType >
typedef itk::ForwardFFTImageFilter<TInputImage, ComplexOutputImageType> FFTFilter;
FFTFilter::Pointer fwdFilter = FFTFilter::New();
fwdFilter->SetInput(inImage);
// typedef VectorImage for output
typedef otb::VectorImage<OutputPixelType> TOutputImage;
typedef otb::ComplexToVectorImageCastFilter<ComplexOutputImageType, TOutputImage> ComplexToVectorImageCastFilter;
ComplexToVectorImageCastFilter::Pointer unaryFunctorImageFilter = ComplexToVectorImageCastFilter::New();
if (shift)
{
otbAppLogINFO(<< "Applying Shift image filter");
typedef itk::FFTShiftImageFilter<FFTFilter::OutputImageType, FFTFilter::OutputImageType> FFTShiftFilterType;
FFTShiftFilterType::Pointer fftShiftFilter = FFTShiftFilterType::New();
fftShiftFilter->SetInput(fwdFilter->GetOutput());
fftShiftFilter->Update();
unaryFunctorImageFilter->SetInput(fftShiftFilter->GetOutput());
}
else
{
unaryFunctorImageFilter->SetInput(fwdFilter->GetOutput());
}
unaryFunctorImageFilter->Update();
// set output image
SetParameterOutputImage<TOutputImage>("out", unaryFunctorImageFilter->GetOutput());
}
else
{
// inverse fft
typedef otb::VectorImage<InputPixelType> TInputImage;
typedef TInputImage::Pointer TInputImagePointer;
TInputImagePointer inImage = GetParameterImage("in");
// typedef TComplexImage for InverseFFTImageFilter input
// This a image type of std::complex<InputPixelType>
typedef otb::Image<std::complex<InputPixelType>, 2> TComplexImage;
// typedef TOutputImage for InverseFFTImageFilter output
typedef otb::Image<OutputPixelType> TOutputImage;
auto toComplex = [](const typename TInputImage::PixelType& A) {
return typename TComplexImage::PixelType(static_cast<typename TComplexImage::PixelType::value_type>(A[0]),
static_cast<typename TComplexImage::PixelType::value_type>(A[1]));
};
auto toComplexFilter = NewFunctorFilter(toComplex);
if (shift)
{
typedef itk::FFTShiftImageFilter<TInputImage, TInputImage> FFTShiftFilterType;
FFTShiftFilterType::Pointer fftShiftFilter = FFTShiftFilterType::New();
fftShiftFilter->SetInput(inImage);
fftShiftFilter->Update();
toComplexFilter->SetInputs(fftShiftFilter->GetOutput());
}
else
{
toComplexFilter->SetInputs(inImage);
}
toComplexFilter->Update();
// typedef itk::::InverseFFTImageFilter over TComplexImage
typedef itk::InverseFFTImageFilter<TComplexImage, TOutputImage> FFTFilter;
FFTFilter::Pointer invFilter = FFTFilter::New();
invFilter->SetInput(toComplexFilter->GetOutput());
invFilter->Update();
// set output image
SetParameterOutputImage<TOutputImage>("out", invFilter->GetOutput());
}
}
// at the end, cleanup FFTW Threads
CleanupFFTWThreads();
}
template <otb::Wavelet::Wavelet TWaveletOperator>
void DoWaveletTransform(const int dir, const unsigned int nlevels, const std::string inkey = "in", const std::string outkey = "out")
{
typedef otb::Image<InputPixelType> TInputImage;
typedef otb::Image<OutputPixelType> TOutputImage;
typedef typename TInputImage::Pointer TInputImagePointer;
TInputImagePointer inImage = GetParameterImage<TInputImage>(inkey);
if (dir == 0)
{
typedef otb::WaveletImageFilter<TInputImage, TOutputImage, TWaveletOperator> TWaveletImageFilter;
typedef typename TWaveletImageFilter::Pointer TWaveletImageFilterPointer;
TWaveletImageFilterPointer waveletImageFilter = TWaveletImageFilter::New();
waveletImageFilter->SetInput(inImage);
waveletImageFilter->SetNumberOfDecompositions(nlevels);
waveletImageFilter->Update();
SetParameterOutputImage<TOutputImage>(outkey, waveletImageFilter->GetOutput());
}
else
{
typedef otb::WaveletInverseImageFilter<TInputImage, TOutputImage, TWaveletOperator> TWaveletImageFilter;
typedef typename TWaveletImageFilter::Pointer TWaveletImageFilterPointer;
TWaveletImageFilterPointer waveletImageFilter = TWaveletImageFilter::New();
waveletImageFilter->SetInput(inImage);
waveletImageFilter->SetNumberOfDecompositions(nlevels);
waveletImageFilter->Update();
SetParameterOutputImage<TOutputImage>(outkey, waveletImageFilter->GetOutput());
}
}
};
} // end of namespace Wrapper
} // end of namespace otb
OTB_APPLICATION_EXPORT(otb::Wrapper::DomainTransform)
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