File: otbLabelMapToSimulatedImageFilter.h

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/*
 * Copyright (C) 2005-2020 Centre National d'Etudes Spatiales (CNES)
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */


#ifndef otbLabelMapToSimulatedImageFilter_h
#define otbLabelMapToSimulatedImageFilter_h


#include "itkLabelMapFilter.h"
#include "otbLabelToProSailParameters.h"
#include "otbReduceSpectralResponse.h"
#include "otbGaussianAdditiveNoiseSampleListFilter.h"
#include "otbSatelliteRSR.h"
#include <string>


namespace otb
{

/**
 * \class LabelMapToSimulatedImageFilter
 * \brief Transform a labelMap into an image.
 *
 * LabelMapToSimulatedImageFilter convert a label map into a reflectance image.
 * Reflectance of the image is computed by applying the RSR (relative spectral response) of the satellite to the spectrum obtained
 * by the spectrum simulator (or read in the database). A gaussian noise is added to the reflectance value of
 * each pixel of the object. However the method used to add this noise (itk::Statistics::MersenneTwisterRandomVariateGenerator)
 * is not thread safe, and then (even if all the remaining is multithread) the number of thread must be set to 1.
 *
 * \sa LabelMapFilter
 *
 * \ingroup OTBSimulation
 */

template <class TInputLabelMap, class TSimuStep1, class TSimuStep2, class TOutputImage>
class ITK_EXPORT LabelMapToSimulatedImageFilter : public itk::LabelMapFilter<TInputLabelMap, TOutputImage>

{
public:
  /**
  * Standard "Self" & Superclass typedef.
  */
  typedef LabelMapToSimulatedImageFilter Self;
  typedef itk::LabelMapFilter<TInputLabelMap, TOutputImage> Superclass;
  typedef itk::SmartPointer<Self>       Pointer;
  typedef itk::SmartPointer<const Self> ConstPointer;

  /** Some convenient typedefs. */
  typedef TInputLabelMap                              InputLabelMapType;
  typedef typename InputLabelMapType::Pointer         InputLabelMapPointer;
  typedef typename InputLabelMapType::ConstPointer    InputLabelMapConstPointer;
  typedef typename InputLabelMapType::LabelObjectType LabelObjectType;
  typedef typename LabelObjectType::ConstLineIterator ConstLineIteratorType;

  typedef typename LabelObjectType::AttributesValueType AttributesValueType;

  typedef TOutputImage                                OutputImageType;
  typedef typename OutputImageType::ConstPointer      OutputImageConstPointer;
  typedef typename OutputImageType::Pointer           OutputImagePointer;
  typedef typename OutputImageType::IndexType         IndexType;
  typedef typename OutputImageType::InternalPixelType InternalPixelType;

  typedef TSimuStep1                            SimulationStep1Type;
  typedef typename SimulationStep1Type::Pointer SimulationStep1Pointer;
  typedef TSimuStep2                            SimulationStep2Type;
  typedef typename SimulationStep2Type::Pointer SimulationStep2Pointer;

  // TODO: template ??
  typedef LabelToProSailParameters<AttributesValueType> LabelToParametersType;
  typedef typename LabelToParametersType::Pointer       LabelToParametersPointer;

  typedef SpectralResponse<double, double> SpectralResponseType;
  typedef typename SpectralResponseType::Pointer SpectralResponsePointer;
  typedef SatelliteRSR<double, double> SatelliteRSRType;
  typedef typename SatelliteRSRType::Pointer SatelliteRSRPointer;

  typedef ReduceSpectralResponse<SpectralResponseType, SatelliteRSRType> ReduceSpectralResponseType;
  typedef typename ReduceSpectralResponseType::Pointer ReduceSpectralResponsePointer;

  typedef itk::Statistics::MersenneTwisterRandomVariateGenerator RandomGeneratorType;
  typedef typename RandomGeneratorType::Pointer                  RandomGeneratorPointer;


  /** Standard Macro*/
  itkTypeMacro(LabelMapToSimulatedImageFilter, LabelMapFilter);
  itkNewMacro(Self);

  itkSetMacro(NumberOfComponentsPerPixel, unsigned int);
  itkGetMacro(NumberOfComponentsPerPixel, unsigned int);

  itkSetMacro(SatRSRFilename, std::string);
  itkGetMacro(SatRSRFilename, std::string);

  itkSetMacro(PathRoot, std::string);
  itkGetMacro(PathRoot, std::string);

  itkSetMacro(Mean, double);
  itkGetMacro(Mean, double);

  itkSetMacro(Variance, double);
  itkGetMacro(Variance, double);


protected:
  LabelMapToSimulatedImageFilter();
  ~LabelMapToSimulatedImageFilter() override
  {
  }
  void PrintSelf(std::ostream& os, itk::Indent indent) const override;

  void BeforeThreadedGenerateData() override;
  void ThreadedProcessLabelObject(LabelObjectType* labelObject) override;
  void GenerateOutputInformation() override;


private:
  LabelMapToSimulatedImageFilter(const Self&) = delete;
  void operator=(const Self&) = delete;

  unsigned int m_NumberOfComponentsPerPixel;
  std::string  m_SatRSRFilename;
  std::string  m_PathRoot;
  /** Mean value of gaussien noise for spectra simulation.*/
  double m_Mean;
  /** Variance of gaussien noise for spectra simulation.*/
  double m_Variance;
};

} // end namespace itk

#ifndef OTB_MANUAL_INSTANTIATION
#include "otbLabelMapToSimulatedImageFilter.hxx"
#endif

#endif