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/*
* Copyright (C) 1999-2011 Insight Software Consortium
* Copyright (C) 2005-2020 Centre National d'Etudes Spatiales (CNES)
*
* This file is part of Orfeo Toolbox
*
* https://www.orfeo-toolbox.org/
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
#ifndef otbStreamingImageToOGRLayerSegmentationFilter_h
#define otbStreamingImageToOGRLayerSegmentationFilter_h
#include "itkExtractImageFilter.h"
#include "otbPersistentFilterStreamingDecorator.h"
#include "otbPersistentImageToOGRLayerFilter.h"
#include "otbRelabelComponentImageFilter.h"
#include "itkMultiplyImageFilter.h"
#include "otbLabeledOutputAccessor.h"
#include "otbMeanShiftSmoothingImageFilter.h"
#include <string>
namespace otb
{
/**
* \class LabeledOutputAccessor
* \brief Specialized class to get the index of the labeled output image in mean shift filter (new version).
*
* \ingroup OTBOGRProcessing
*/
template <class TInputImage, class TOutputImage, class TOutputImage2, class TKernelType>
class LabeledOutputAccessor<MeanShiftSmoothingImageFilter<TInputImage, TOutputImage, TOutputImage2, TKernelType>>
{
public:
typedef typename MeanShiftSmoothingImageFilter<TInputImage, TOutputImage, TOutputImage2, TKernelType>::OutputLabelImageType LabelImageType;
itkStaticConstMacro(LabeledOutputIndex, unsigned int, 0);
};
/** \class PersistentStreamingLabelImageToOGRDataFilter
* \brief This filter is a framework for large scale segmentation.
* For a detailed description @see StreamingImageToOGRLayerSegmentationFilter
*
* \ingroup OTBOGRProcessing
*/
template <class TImageType, class TSegmentationFilter>
class PersistentImageToOGRLayerSegmentationFilter : public otb::PersistentImageToOGRLayerFilter<TImageType>
{
public:
/** Standard Self typedef */
typedef PersistentImageToOGRLayerSegmentationFilter Self;
typedef PersistentImageToOGRLayerFilter<TImageType> Superclass;
typedef itk::SmartPointer<Self> Pointer;
typedef itk::SmartPointer<const Self> ConstPointer;
typedef typename Superclass::InputImageType InputImageType;
typedef typename Superclass::InputImagePointer InputImagePointerType;
typedef TSegmentationFilter SegmentationFilterType;
typedef typename LabeledOutputAccessor<SegmentationFilterType>::LabelImageType LabelImageType;
typedef typename LabelImageType::PixelType LabelPixelType;
typedef otb::LabelImageToOGRDataSourceFilter<LabelImageType> LabelImageToOGRDataSourceFilterType;
typedef typename Superclass::OGRDataSourceType OGRDataSourceType;
typedef typename Superclass::OGRDataSourcePointerType OGRDataSourcePointerType;
typedef typename Superclass::OGRLayerType OGRLayerType;
typedef RelabelComponentImageFilter<LabelImageType, LabelImageType> RelabelComponentImageFilterType;
typedef itk::MultiplyImageFilter<LabelImageType, LabelImageType, LabelImageType> MultiplyImageFilterType;
/** Method for creation through the object factory. */
itkNewMacro(Self);
/** Runtime information support. */
itkTypeMacro(PersistentImageToOGRLayerSegmentationFilter, PersistentImageToOGRLayerFilter);
/** Return a pointer to the segmentation filter used. */
itkGetObjectMacro(SegmentationFilter, SegmentationFilterType);
itkSetStringMacro(FieldName);
itkGetStringMacro(FieldName);
/** Set the first Label value (default is 1). Incremental step is 1.*/
void SetStartLabel(const LabelPixelType& label)
{
m_StartLabel = label;
m_TileMaxLabel = label;
}
/** Return the first label value*/
itkGetMacro(StartLabel, LabelPixelType);
/**
* Set the value of 8-connected neighborhood option used in \c LabelImageToOGRDataSourceFilter
*/
itkSetMacro(Use8Connected, bool);
/**
* Get the value of 8-connected neighborhood option used in \c LabelImageToOGRDataSourceFilter
*/
itkGetMacro(Use8Connected, bool);
/** Set the option for filtering small objects. Default to false. */
itkSetMacro(FilterSmallObject, bool);
/** Return the value of filter small objects option.*/
itkGetMacro(FilterSmallObject, bool);
/** Set the minimum object size (in pixels) in case FilterSmallObject option is true.*/
itkSetMacro(MinimumObjectSize, unsigned int);
/** Get the minimum object size.*/
itkGetMacro(MinimumObjectSize, unsigned int);
/** Option for simplifying geometries. Default to false.*/
itkSetMacro(Simplify, bool);
itkGetMacro(Simplify, bool);
/** Set the tolerance value for simplifying geometries.
* \sa \c OGRGeometry::Simplify() \c OGRGeometry::SimplifyPreserveTopology()
*/
itkSetMacro(SimplificationTolerance, double);
/** Get the tolerance value for simplifying geometries.
* \sa \c OGRGeometry::Simplify() \c OGRGeometry::SimplifyPreserveTopology()
*/
itkGetMacro(SimplificationTolerance, double);
/** Set/Get the input mask image.
* All pixels in the mask with a value of 0 will not be considered
* suitable for vectorization.
*/
virtual void SetInputMask(const LabelImageType* mask);
virtual const LabelImageType* GetInputMask(void);
protected:
PersistentImageToOGRLayerSegmentationFilter();
~PersistentImageToOGRLayerSegmentationFilter() override;
private:
PersistentImageToOGRLayerSegmentationFilter(const Self&) = delete;
void operator=(const Self&) = delete;
OGRDataSourcePointerType ProcessTile() override;
int m_TileMaxLabel;
LabelPixelType m_StartLabel;
typename SegmentationFilterType::Pointer m_SegmentationFilter;
std::string m_FieldName;
unsigned int m_TileNumber;
bool m_Use8Connected;
bool m_FilterSmallObject;
unsigned int m_MinimumObjectSize;
bool m_Simplify;
double m_SimplificationTolerance;
};
/** \class StreamingImageToOGRLayerSegmentationFilter
* \brief This filter is a framework for large scale segmentation.
* It is a persistent filter that process the input image tile by tile.
* This filter is templated over the segmentation filter. This later is used to segment each tile of the input image.
* Each segmentation result (for each tile) is then vectorized using \c LabelImageToOGRDataSourceFilter
* (based on \c GDALPolygonize()).
* The output \c OGRDataSource of the \c LabelImageToOGRDataSourceFilter is a "memory" DataSource
* (ie all features of a tile are kept in memory). From here some optional processing can be done,
* depending on input parameters :
* - Simplify option : If set to true, the SimplificationTolerance parameter is used to simplify all geometries,
* using the \c OGRGeometry::Simplify() method, based on Douglas-Peuker algorithm.
* - FilterSmallObject option : if set to true, polygons with a size less than MinimumObjectSize (in pixels)
* are discarded.
* Finally all features contained in the "memory" DataSource are copied into the input Layer,
* in the layer specified with the \c SetLayerName() method.
*
* \note The Use8Connected parameter can be turn on and it will be used in \c GDALPolygonize(). But be carreful, it
* can create cross polygons !
* \note The input mask can be used to exclude pixels from vectorization process.
* All pixels with a value of 0 in the input mask image will not be suitable for vectorization.
*
* \ingroup OTBOGRProcessing
*/
template <class TImageType, class TSegmentationFilter>
class ITK_EXPORT StreamingImageToOGRLayerSegmentationFilter
: public PersistentFilterStreamingDecorator<PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter>>
{
public:
/** Standard Self typedef */
typedef StreamingImageToOGRLayerSegmentationFilter Self;
typedef PersistentFilterStreamingDecorator<PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter>> Superclass;
typedef itk::SmartPointer<Self> Pointer;
typedef itk::SmartPointer<const Self> ConstPointer;
/** Type macro */
itkNewMacro(Self);
/** Creation through object factory macro */
itkTypeMacro(StreamingImageToOGRLayerSegmentationFilter, PersistentFilterStreamingDecorator);
typedef TSegmentationFilter SegmentationFilterType;
typedef TImageType InputImageType;
typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter>::LabelPixelType LabelPixelType;
typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter>::LabelImageType LabelImageType;
typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter>::OGRDataSourcePointerType OGRDataSourcePointerType;
typedef typename PersistentImageToOGRLayerSegmentationFilter<TImageType, TSegmentationFilter>::OGRLayerType OGRLayerType;
typedef typename InputImageType::SizeType SizeType;
/** Set the input image. */
using Superclass::SetInput;
void SetInput(InputImageType* input)
{
this->GetFilter()->SetInput(input);
}
const InputImageType* GetInput()
{
return this->GetFilter()->GetInput();
}
/** Set/Get the input mask image.
* All pixels in the mask with a value of 0 will not be considered
* suitable for vectorization.
*/
void SetInputMask(LabelImageType* mask)
{
this->GetFilter()->SetInputMask(mask);
}
const LabelImageType* GetInputMask()
{
return this->GetFilter()->GetInputMask();
}
/** Set the \c ogr::Layer in which the layer LayerName will be created. */
void SetOGRLayer(const OGRLayerType& ogrLayer)
{
this->GetFilter()->SetOGRLayer(ogrLayer);
}
void SetFieldName(const std::string& fieldName)
{
this->GetFilter()->SetFieldName(fieldName);
}
const std::string& GetFieldName() const
{
return this->GetFilter()->GetFieldName();
}
SegmentationFilterType* GetSegmentationFilter()
{
return this->GetFilter()->GetSegmentationFilter();
}
/** Set the first Label value (default is 1). Incremental step is 1.*/
void SetStartLabel(const LabelPixelType& label)
{
this->GetFilter()->SetStartLabel(label);
}
/** Return the first label value*/
const LabelPixelType& GetStartLabel()
{
return this->GetFilter()->GetStartLabel();
}
/** Retrieve the actual streamsize used */
SizeType GetStreamSize()
{
return this->GetFilter()->GetStreamSize();
}
void Initialize()
{
this->GetFilter()->Initialize();
}
/**
* Set the value of 8-connected neighborhood option used in \c LabelImageToOGRDataSourceFilter
*/
void SetUse8Connected(bool flag)
{
this->GetFilter()->SetUse8Connected(flag);
}
bool GetUse8Connected()
{
return this->GetFilter()->GetUse8Connected();
}
/** Set the option for filtering small objects. Default to false. */
void SetFilterSmallObject(bool flag)
{
this->GetFilter()->SetFilterSmallObject(flag);
}
bool GetFilterSmallObject()
{
return this->GetFilter()->GetFilterSmallObject();
}
/** Set the minimum object size (in pixels) in case FilterSmallObject option is true.*/
void SetMinimumObjectSize(const unsigned int& size)
{
this->GetFilter()->SetMinimumObjectSize(size);
}
unsigned int GetMinimumObjectSize()
{
return this->GetFilter()->GetMinimumObjectSize();
}
/** Option for simplifying geometries. Default to false.*/
void SetSimplify(bool flag)
{
this->GetFilter()->SetSimplify(flag);
}
bool GetSimplify()
{
return this->GetFilter()->GetSimplify();
}
/** Set the tolerance value for simplifying geometries.
* \sa \c OGRGeometry::Simplify() \c OGRGeometry::SimplifyPreserveTopology()
*/
void SetSimplificationTolerance(const double& tol)
{
this->GetFilter()->SetSimplificationTolerance(tol);
}
double GetSimplificationTolerance()
{
return this->GetFilter()->GetSimplificationTolerance();
}
protected:
/** Constructor */
StreamingImageToOGRLayerSegmentationFilter()
{
}
/** Destructor */
~StreamingImageToOGRLayerSegmentationFilter() override
{
}
private:
StreamingImageToOGRLayerSegmentationFilter(const Self&) = delete;
void operator=(const Self&) = delete;
};
}
#ifndef OTB_MANUAL_INSTANTIATION
#include "otbStreamingImageToOGRLayerSegmentationFilter.hxx"
#endif
#endif
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