File: otbOGRDataToSamplePositionFilter.h

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/*
 * Copyright (C) 2005-2022 Centre National d'Etudes Spatiales (CNES)
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

#ifndef otbOGRDataToSamplePositionFilter_h
#define otbOGRDataToSamplePositionFilter_h

#include "otbPersistentSamplingFilterBase.h"
#include "otbPersistentFilterStreamingDecorator.h"
#include "otbSamplingRateCalculator.h"
#include "otbPeriodicSampler.h"
#include "otbImage.h"
#include <string>

namespace otb
{

/**
 * \class PersistentOGRDataToSamplePositionFilter
 *
 * \brief Persistent filter to extract sample position from an image
 *
 * This filter uses an input image (to define the sampling grid), an optional
 * input mask, and a set of input vectors that define the sampling regions for
 * each class.
 *
 * The filter has a set of samplers (one for each class), they define what
 * sampling rate and strategy should be performed.
 *
 * Several levels of output are supported. For instance, with two outputs :
 * when the sampler from level 1 discards a sample, the sampler from level 2 is
 * called.
 *
 * \ingroup OTBSampling
 */
template <class TInputImage, class TMaskImage, class TSampler>
class ITK_EXPORT PersistentOGRDataToSamplePositionFilter : public PersistentSamplingFilterBase<TInputImage, TMaskImage>
{
public:
  /** Standard Self typedef */
  typedef PersistentOGRDataToSamplePositionFilter Self;
  typedef PersistentSamplingFilterBase<TInputImage, TMaskImage> Superclass;
  typedef itk::SmartPointer<Self>       Pointer;
  typedef itk::SmartPointer<const Self> ConstPointer;

  typedef TInputImage                         InputImageType;
  typedef typename InputImageType::Pointer    InputImagePointer;
  typedef typename InputImageType::RegionType RegionType;
  typedef typename InputImageType::PointType  PointType;

  typedef TMaskImage                      MaskImageType;
  typedef typename MaskImageType::Pointer MaskImagePointer;

  typedef ogr::DataSource          OGRDataType;
  typedef ogr::DataSource::Pointer OGRDataPointer;

  typedef TSampler                            SamplerType;
  typedef typename SamplerType::Pointer       SamplerPointerType;
  typedef typename SamplerType::ParameterType SamplerParameterType;
  typedef typename std::map<std::string, SamplerPointerType> SamplerMapType;

  typedef std::map<std::string, unsigned int> ClassPartitionType;

  typedef itk::DataObject::DataObjectPointerArraySizeType DataObjectPointerArraySizeType;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Runtime information support. */
  itkTypeMacro(PersistentOGRDataToSamplePositionFilter, PersistentSamplingFilterBase);

  void Synthetize(void) override
  {
  }

  /** Reset method called before starting the streaming*/
  void Reset(void) override;

  /** Get a reference to the internal samplers at a given level */
  SamplerMapType& GetSamplers(unsigned int level);

  /** Set an output container for sample position associated
   * with corresponding rates, for a given level.*/
  void SetOutputPositionContainerAndRates(otb::ogr::DataSource* data, const SamplingRateCalculator::MapRateType& map, unsigned int level);

  /** Get the output position container of a given level */
  const otb::ogr::DataSource* GetOutputPositionContainer(unsigned int level) const;
  otb::ogr::DataSource* GetOutputPositionContainer(unsigned int level);

  /** Get the number of sampling levels used in this filter.*/
  unsigned int GetNumberOfLevels();

  /** Clear all output position containers */
  void ClearOutputs();

  /** Make a DataObject of the correct type to be used as the specified
   * output. */
  itk::DataObject::Pointer MakeOutput(DataObjectPointerArraySizeType idx) override;
  using Superclass::MakeOutput;

  /** Get/Set of the field name storing the original FID of each sample */
  itkSetMacro(OriginFieldName, std::string);
  itkGetMacro(OriginFieldName, std::string);

protected:
  /** Constructor */
  PersistentOGRDataToSamplePositionFilter();
  /** Destructor */
  ~PersistentOGRDataToSamplePositionFilter() override
  {
  }

  /** Call samplers on a current position, for a given class */
  void ProcessSample(const ogr::Feature& feature, typename TInputImage::IndexType& imgIndex, typename TInputImage::PointType& imgPoint,
                     itk::ThreadIdType& threadid) override;

  /** Method to split the input OGRDataSource
   *  according to the class partition
   */
  void DispatchInputVectors(void) override;

  /** Fill the output vectors with a special ordering (class partition) */
  void FillOneOutput(unsigned int outIdx, ogr::DataSource* outDS, bool update) override;

private:
  PersistentOGRDataToSamplePositionFilter(const Self&) = delete;
  void operator=(const Self&) = delete;

  void ComputeClassPartition(void);

  /** (internal) map associating a class name with a thread number */
  ClassPartitionType m_ClassPartition;

  /** Internal samplers*/
  std::vector<SamplerMapType> m_Samplers;

  /** Field name to store the FID of the geometry each sample comes from.
   *  When this name is empty, no FID is stored. */
  std::string m_OriginFieldName;

  /** Flag to enable/disable origin FID in outputs */
  bool m_UseOriginField;
};

/**
 * \class OGRDataToSamplePositionFilter
 *
 * \brief Extracts sample position from an image using a persistent filter
 *
 * \sa PersistentOGRDataToSamplePositionFilter
 *
 * \ingroup OTBSampling
 */
template <class TInputImage, class TMaskImage = otb::Image<unsigned char>, class TSampler = otb::PeriodicSampler>
class ITK_EXPORT OGRDataToSamplePositionFilter
    : public PersistentFilterStreamingDecorator<PersistentOGRDataToSamplePositionFilter<TInputImage, TMaskImage, TSampler>>
{
public:
  /** Standard Self typedef */
  typedef OGRDataToSamplePositionFilter Self;
  typedef PersistentFilterStreamingDecorator<PersistentOGRDataToSamplePositionFilter<TInputImage, TMaskImage, TSampler>> Superclass;
  typedef itk::SmartPointer<Self>       Pointer;
  typedef itk::SmartPointer<const Self> ConstPointer;

  typedef TInputImage          InputImageType;
  typedef TMaskImage           MaskImageType;
  typedef otb::ogr::DataSource OGRDataType;

  typedef typename Superclass::FilterType FilterType;

  typedef TSampler                            SamplerType;
  typedef typename SamplerType::Pointer       SamplerPointerType;
  typedef typename SamplerType::ParameterType SamplerParameterType;
  typedef typename std::map<std::string, SamplerPointerType> SamplerMapType;

  /** Type macro */
  itkNewMacro(Self);

  /** Creation through object factory macro */
  itkTypeMacro(OGRDataToSamplePositionFilter, PersistentFilterStreamingDecorator);

  using Superclass::SetInput;

  /** Set the input image */
  virtual void SetInput(const TInputImage* image);

  /** Get the input image*/
  const TInputImage* GetInput();

  /** Set the input OGRDataSource containing sampling areas */
  void SetOGRData(const otb::ogr::DataSource* data);

  /** Get the input OGRDataSource containing sampling areas */
  const otb::ogr::DataSource* GetOGRData();

  /** Set the input mask (optional) */
  void SetMask(const TMaskImage* mask);

  /** Get input mask (may be null)*/
  const TMaskImage* GetMask();

  /** Set the field name containing class names*/
  void SetFieldName(std::string key);

  /** Get the field name containing class names*/
  std::string GetFieldName();

  /** Set the layer index containing sampling areas*/
  void SetLayerIndex(int index);

  /** Get the layer index containing sampling areas*/
  int GetLayerIndex();

  /** Set the sampling parameters for all classes at a given level.*/
  void SetSamplerParameters(SamplerParameterType param, unsigned int level = 0);

  /** Get a reference to the internal sampler map at a given level.*/
  SamplerMapType& GetSamplers(unsigned int level = 0);

  /** Set the output container with the associated rates at a given level.*/
  void SetOutputPositionContainerAndRates(otb::ogr::DataSource* data, const SamplingRateCalculator::MapRateType& map, unsigned int level = 0);

  /** Get the output position container at a given level.*/
  otb::ogr::DataSource* GetOutputPositionContainer(unsigned int level = 0);

  /** Set the field name storing the original FID of each sample*/
  void SetOriginFieldName(std::string key);

  /** Get the field name storing the original FID of each sample*/
  std::string GetOriginFieldName();

protected:
  /** Constructor */
  OGRDataToSamplePositionFilter()
  {
  }
  /** Destructor */
  ~OGRDataToSamplePositionFilter() override
  {
  }

private:
  OGRDataToSamplePositionFilter(const Self&) = delete;
  void operator=(const Self&) = delete;
};

} // end of namespace otb

#ifndef OTB_MANUAL_INSTANTIATION
#include "otbOGRDataToSamplePositionFilter.hxx"
#endif

#endif