File: otbPersistentSamplingFilterBase.h

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/*
 * Copyright (C) 2005-2022 Centre National d'Etudes Spatiales (CNES)
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */

#ifndef otbPersistentSamplingFilterBase_h
#define otbPersistentSamplingFilterBase_h

#include "otbPersistentImageFilter.h"
#include "otbOGRDataSourceWrapper.h"
#include "otbImage.h"
#include <string>

namespace otb
{
/** \class PersistentSamplingFilterBase
 *  \brief Base class for persistent filter doing sampling tasks
 *
 *  \note This class contains pure virtual method, and can not be instantiated.
 *
 * \sa PersistentOGRDataToClassStatisticsFilter
 * \sa PersistentOGRDataToSamplePositionFilter
 *
 * \ingroup OTBSampling
 */
template <class TInputImage, class TMaskImage = otb::Image<unsigned char, 2>>
class ITK_EXPORT PersistentSamplingFilterBase : public otb::PersistentImageFilter<TInputImage, TInputImage>
{
public:
  /** Standard typedefs */
  typedef PersistentSamplingFilterBase Self;
  typedef PersistentImageFilter<TInputImage, TInputImage> Superclass;
  typedef itk::SmartPointer<Self>       Pointer;
  typedef itk::SmartPointer<const Self> ConstPointer;

  /** Creation through object factory macro */
  itkTypeMacro(PersistentSamplingFilterBase, PersistentImageFilter);

  /** Template parameters typedefs */
  typedef TInputImage InputImageType;
  typedef TMaskImage  MaskImageType;

  typedef typename TInputImage::RegionType RegionType;

  typedef ogr::DataSource::Pointer OGRDataPointer;

  /** Set the input OGRDataSource that contains sampling areas for each class*/
  void SetOGRData(const ogr::DataSource* vector);

  /** Get the input OGRDataSource with sampling regions*/
  const ogr::DataSource* GetOGRData();

  /** Set an input mask (optional) */
  void SetMask(const TMaskImage* mask);

  /** Get the input mask (may be null) */
  const TMaskImage* GetMask();

  /** Set the OGR layer creation options */
  void SetOGRLayerCreationOptions(const std::vector<std::string>& options);

  /** Get the OGR layer creation options */
  const std::vector<std::string>& GetOGRLayerCreationOptions();

  /** Set/Get macro for the field name containing class names
   * in the input vectors.*/
  itkSetMacro(FieldName, std::string);
  itkGetMacro(FieldName, std::string);

  /** Get macro for the field index (deduced from the field name) */
  itkGetMacro(FieldIndex, int);

  /** Set/Get macro for the layer index containing the sampling areas */
  itkSetMacro(LayerIndex, int);
  itkGetMacro(LayerIndex, int);

  /** Set/Get macro for the layer name */
  itkSetMacro(OutLayerName, std::string);
  itkGetMacro(OutLayerName, std::string);

protected:
  /** Constructor */
  PersistentSamplingFilterBase();
  /** Destructor */
  ~PersistentSamplingFilterBase() override
  {
  }

  /** Use the same output information as input image, check the field index
   *  and the mask footprint */
  void GenerateOutputInformation() override;

  /** Use an empty region to input image (pixel values not needed) and set
   *  the requested region for the mask */
  void GenerateInputRequestedRegion() override;

  /** Generate data should thread over */
  void GenerateData(void) override;

  /** Allocate in-memory layers for input and outputs */
  void AllocateOutputs(void) override;

  /** Start of main processing loop */
  virtual void ThreadedGenerateVectorData(const ogr::Layer& layerForThread, itk::ThreadIdType threadid);

  /** Process a geometry, recursive method when the geometry is a collection */
  void ExploreGeometry(const ogr::Feature& feature, OGRGeometry* geom, RegionType& region, itk::ThreadIdType& threadid);

  /** Process a line string : use pixels that cross the line */
  virtual void ProcessLine(const ogr::Feature& feature, OGRLineString* line, RegionType& region, itk::ThreadIdType& threadid);

  /** Process a polygon : use pixels inside the polygon */
  virtual void ProcessPolygon(const ogr::Feature& feature, OGRPolygon* polygon, RegionType& region, itk::ThreadIdType& threadid);

  /** Generic method called for each matching pixel position (NOT IMPLEMENTED)*/
  virtual void ProcessSample(const ogr::Feature& feature, typename TInputImage::IndexType& imgIndex, typename TInputImage::PointType& imgPoint,
                             itk::ThreadIdType& threadid);

  /** Generic method called once before processing each feature */
  virtual void PrepareFeature(const ogr::Feature& feature, itk::ThreadIdType& threadid);

  /** Common function to test if a point is inside a polygon */
  bool IsSampleInsidePolygon(OGRPolygon* poly, OGRPoint* tmpPoint);

  /** Common function to test if a pixel crosses the line */
  bool IsSampleOnLine(OGRLineString* line, typename TInputImage::PointType& position, typename TInputImage::SpacingType& absSpacing, OGRPolygon& tmpPolygon);

  /** Get the region bounding a set of features */
  RegionType FeatureBoundingRegion(const TInputImage* image, otb::ogr::Layer::const_iterator& featIt) const;

  /** Method to split the input OGRDataSource between several containers
   *  for each thread. Default is to put the same number of features for
   *  each thread.*/
  virtual void DispatchInputVectors(void);

  /** Gather the content of in-memory output layer into the filter outputs */
  virtual void GatherOutputVectors(void);

  /** Fill output vectors for a particular output */
  virtual void FillOneOutput(unsigned int outIdx, ogr::DataSource* outDS, bool update);

  /** Utility method to add new fields on an output layer */
  virtual void InitializeOutputDataSource(ogr::DataSource* inputDS, ogr::DataSource* outputDS);

  typedef struct
  {
    std::string  Name;
    OGRFieldType Type;
    int          Width;
    int          Precision;
  } SimpleFieldDefn;

  /** Clear current additional fields */
  void ClearAdditionalFields();

  /** Create a new additional field */
  void CreateAdditionalField(std::string name, OGRFieldType type, int width = 0, int precision = 0);

  /** Get a reference over the additional fields */
  const std::vector<SimpleFieldDefn>& GetAdditionalFields();

  /** Callback function to launch VectorThreadedGenerateData in each thread */
  static ITK_THREAD_RETURN_TYPE VectorThreaderCallback(void* arg);

  /** basically the same struct as itk::ImageSource::ThreadStruct */
  struct VectorThreadStruct
  {
    Pointer Filter;
  };

  /** Give access to in-memory input layers */
  ogr::Layer GetInMemoryInput(unsigned int threadId);

  /** Give access to in-memory output layers */
  ogr::Layer GetInMemoryOutput(unsigned int threadId, unsigned int index = 0);

private:
  PersistentSamplingFilterBase(const Self&) = delete;
  void operator=(const Self&) = delete;

  /** Field name containing the class name*/
  std::string m_FieldName;

  /** Field index corresponding to the field name m_FieldName */
  int m_FieldIndex;

  /** Layer to use in the input vector file, default to 0 */
  int m_LayerIndex;

  /** name of the output layers */
  std::string m_OutLayerName;

  /** Creation option for output layers */
  std::vector<std::string> m_OGRLayerCreationOptions;

  /** Additional field definitions to add in output data sources */
  std::vector<SimpleFieldDefn> m_AdditionalFields;

  /** In-memory containers storing input geometries for each thread*/
  std::vector<OGRDataPointer> m_InMemoryInputs;

  /** In-memory containers storing position during iteration loop*/
  std::vector<std::vector<OGRDataPointer>> m_InMemoryOutputs;
};
} // End namespace otb

#ifndef OTB_MANUAL_INSTANTIATION
#include "otbPersistentSamplingFilterBase.hxx"
#endif

#endif