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#!/usr/bin/python3
#
# Copyright (c) 2012 Mikkel Schubert <MikkelSch@gmail.com>
#
# Permission is hereby granted, free of charge, to any person obtaining a copy
# of this software and associated documentation files (the "Software"), to deal
# in the Software without restriction, including without limitation the rights
# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
# copies of the Software, and to permit persons to whom the Software is
# furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included in
# all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
# SOFTWARE.
#
from unittest.mock import Mock
import pytest
import paleomix.common.sampling as sampling
###############################################################################
###############################################################################
# weighted_sampling
_SELECT_BY_VALUE = (
(0.00000, "a"),
(0.16666, "a"), # < 1/6
(1 / 6.0, "b"),
(0.49999, "b"), # < 3/6
(3 / 6.0, "c"),
(0.99999, "c"),
)
@pytest.mark.parametrize("value, expectation", _SELECT_BY_VALUE)
def test_weighted_sampling__select_by_weight(value, expectation):
choices = "abc"
weights = (1, 2, 3)
rng = Mock(random=lambda: value)
iterator = sampling.weighted_sampling(choices, weights, rng)
assert next(iterator) == expectation
@pytest.mark.parametrize("choices, weights", (([], []), ([], [1, 2]), ([1, 2], [])))
def test_weighted_sampling__(choices, weights):
iterator = sampling.weighted_sampling(choices, weights)
with pytest.raises(ValueError):
iterator.__next__()
_MISMATCHED_LENGTH_INPUTS = (
([0, 1], [1, 2, 3]),
([0, 1, 2], [1, 2]),
(iter([0, 1]), [1, 2, 3]),
([0, 1], iter([1, 2, 3])),
(iter([0, 1]), iter([1, 2, 3])),
)
@pytest.mark.parametrize("choices, weights", _MISMATCHED_LENGTH_INPUTS)
def test_weighted_sampling__different_length_input_raises_value_error(choices, weights):
iterator = sampling.weighted_sampling(choices, weights)
with pytest.raises(ValueError):
iterator.__next__()
def test_weighted_sampling__negative_weight_value_error():
choices = [0, 1, 2]
weights = [1, -2, 3]
iterator = sampling.weighted_sampling(choices, weights)
with pytest.raises(ValueError):
iterator.__next__()
def test_weighted_sampling__zero_weight_raises_value_error():
choices = [0, 1, 2]
weights = [1, 0, 3]
iterator = sampling.weighted_sampling(choices, weights)
with pytest.raises(ValueError):
iterator.__next__()
def test_weighted_sampling__non_numerical_weight_raises_type_error():
choices = [0, 1, 2]
weights = [1, "foo", 3]
iterator = sampling.weighted_sampling(choices, weights)
with pytest.raises(TypeError):
iterator.__next__()
###############################################################################
###############################################################################
# reservoir_sampling
def test_reservoir_sampling__select_first_item():
rng = Mock(randint=lambda _min, _max: 1)
values = [1, 2]
result = sampling.reservoir_sampling(values, 1, rng)
assert result == [1]
def test_reservoir_sampling__select_second_item():
rng = Mock(randint=lambda _min, _max: 0)
values = [1, 2]
result = sampling.reservoir_sampling(values, 1, rng)
assert result == [2]
def test_reservoir_sampling__upsample_equals_input():
result = sampling.reservoir_sampling(list(range(5)), 10)
assert result == list(range(5))
def test_reservoir_sampling__downsample_to_zero():
result = sampling.reservoir_sampling(list(range(5)), 0)
assert result == []
def test_reservoir_sampling__downsample_to_negative_raises_value_error():
with pytest.raises(ValueError):
sampling.reservoir_sampling(list(range(5)), -1)
def test_reservoir_sampling__downsample_to_float_raises_type_error():
with pytest.raises(TypeError):
sampling.reservoir_sampling(list(range(5)), 1.0)
def test_reservoir_sampling__downsample_to_non_number_raises_type_error():
with pytest.raises(TypeError):
sampling.reservoir_sampling(list(range(5)), "Eh?")
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