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// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// llil4map.cc (new chunking variant)
// https://www.perlmonks.com/?node_id=11149643
// A phmap::parallel_flat_hash_map demonstration.
// By Mario Roy, March 31, 2024
// Based on llil3m.cpp https://perlmonks.com/?node_id=11149482
// Original challenge https://perlmonks.com/?node_id=11147822
// and summary https://perlmonks.com/?node_id=11150293
// Other demonstrations https://perlmonks.com/?node_id=11149907
//
// Further changes after original version in this repository by Gregory Popovitch
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// OpenMP Little Book - https://nanxiao.gitbooks.io/openmp-little-book
//
// Obtain the parallel hashmap library (required dependency):
// git clone --depth=1 https://github.com/greg7mdp/parallel-hashmap
//
// Compile on Linux (clang++ or g++):
// clang++ -o llil4map -std=c++20 -fopenmp -Wall -O3 llil4map.cc -I./parallel-hashmap
//
// On macOS, use g++-12 from https://brew.sh (installation: brew install gcc@12).
// The g++ command also works with mingw C++ compiler (https://sourceforge.net/projects/mingw-w64)
// that comes bundled with Strawberry Perl (C:\Strawberry\c\bin\g++.exe).
//
// Obtain gen-llil.pl and gen-long-llil.pl from https://perlmonks.com/?node_id=11148681
// perl gen-llil.pl big1.txt 200 3 1
// perl gen-llil.pl big2.txt 200 3 1
// perl gen-llil.pl big3.txt 200 3 1
// perl gen-long-llil.pl long1.txt 600
// perl gen-long-llil.pl long2.txt 600
// perl gen-long-llil.pl long3.txt 600
//
// To make random input, obtain shuffle.pl from https://perlmonks.com/?node_id=11149800
// perl shuffle.pl big1.txt >tmp && mv tmp big1.txt
// perl shuffle.pl big2.txt >tmp && mv tmp big2.txt
// perl shuffle.pl big3.txt >tmp && mv tmp big3.txt
//
// Example run: llil4map big1.txt big2.txt big3.txt >out.txt
// NUM_THREADS=3 llil4map ...
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#include <cassert>
#include <cstdio>
#include <cstddef>
#include <cstdint>
#include <cstdlib>
#include <cstring>
#include <ctime>
#include <compare>
#include <chrono>
#include <string>
#include <string_view>
#include <array>
#include <vector>
#include <thread>
#include <execution>
#include <atomic>
#include <iostream>
#include <iomanip>
#include <fstream>
#include <parallel_hashmap/phmap.h>
static_assert(sizeof(size_t) == sizeof(int64_t), "size_t too small, need a 64-bit compile");
// Specify 0/1 to use boost's parallel sorting algorithm; faster than __gnu_parallel::sort.
// https://www.boost.org/doc/libs/1_81_0/libs/sort/doc/html/sort/parallel.html
// This requires the boost header files: e.g. devpkg-boost bundle on Clear Linux.
// Note: Another option is downloading and unpacking Boost locally.
// (no need to build it because the bits we use are header file only)
#define USE_BOOST_PARALLEL_SORT 1
#if USE_BOOST_PARALLEL_SORT
#pragma clang diagnostic push
#pragma clang diagnostic ignored "-Wunused-parameter"
#pragma clang diagnostic ignored "-Wshadow"
#include <boost/sort/sort.hpp>
#pragma clang diagnostic pop
#endif
#ifdef _OPENMP
#include <omp.h>
#endif
class spinlock_mutex {
// https://rigtorp.se/spinlock/
// https://vorbrodt.blog/2019/02/12/fast-mutex/
public:
void lock() noexcept {
for (;;) {
if (!lock_.exchange(true, std::memory_order_acquire))
break;
while (lock_.load(std::memory_order_relaxed))
__builtin_ia32_pause();
}
}
void unlock() noexcept {
lock_.store(false, std::memory_order_release);
}
private:
alignas(4 * sizeof(std::max_align_t)) std::atomic_bool lock_ = false;
};
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
typedef uint32_t int_type;
// ---------------------------------------------------------------------------------------------
// Stores a string + a count
// For strings up to 11 bytes, total space used is 16 bytes (no wasted space in set)
// For larger strings, uses 16 bytes + strlen(string) + 1
//
// invariants
// if extra[3], str is a valid string pointer
// if !extra[3], the 12 bytes starting at (const char *)(&str) store a null_terminated string
// ---------------------------------------------------------------------------------------------
struct string_cnt {
char * str;
char extra[4];
uint32_t cnt;
static constexpr size_t buffsz = sizeof(str) + sizeof(extra);
string_cnt() : str{nullptr}, extra{0,0,0,0}, cnt{0} {}
string_cnt(const char *s, uint32_t c = 0) : str(nullptr), cnt(c) { set(s); }
~string_cnt() { free(); }
string_cnt(const string_cnt& o) {
set(o.get());
}
string_cnt(string_cnt&& o) noexcept {
if (o.extra[3]) {
str = o.str;
o.str = nullptr;
extra[3] = 1;
} else {
std::strcpy((char *)(&str), o.get());
extra[3] = 0;
}
cnt = o.cnt;
}
string_cnt& operator=(const string_cnt& o) {
free();
set(o.get());
cnt = o.cnt;
return *this;
}
string_cnt& operator=(string_cnt&& o) noexcept {
free();
new (this) string_cnt(std::move(o));
return *this;
}
std::strong_ordering operator<=>(const string_cnt& o) const { return std::strcmp(get(), o.get()) <=> 0; }
bool operator==(const string_cnt& o) const { return std::strcmp(get(), o.get()) == 0; }
std::size_t hash() const {
auto s = get();
std::string_view sv { s, strlen(s) };
return std::hash<std::string_view>()(sv);
}
const char *get() const { return extra[3] ? str : (const char *)(&str); }
private:
void free() { if (extra[3]) { delete [] str; str = nullptr; } }
void set(const char *s) {
static_assert(buffsz == 12);
static_assert(offsetof(string_cnt, cnt) == (intptr_t)buffsz);
static_assert(sizeof(string_cnt) == 16);
assert(!extra[3] || !str);
if (!s)
std::memset(&str, 0, buffsz);
else {
auto len = std::strlen(s);
if (len >= buffsz) {
str = new char[len+1];
std::strcpy(str, s);
extra[3] = 1;
} else {
std::strcpy((char *)(&str), s);
extra[3] = 0;
}
}
}
};
namespace std {
template<> struct hash<string_cnt> {
std::size_t operator()(const string_cnt& v) const noexcept { return v.hash(); };
};
}
using string_cnt_vector_t = std::vector<string_cnt>;
// declare the type of the parallel_flat_hash_set with spinlock mutexes
using string_cnt_set_t = phmap::parallel_flat_hash_set<
string_cnt,
phmap::priv::hash_default_hash<string_cnt>,
phmap::priv::hash_default_eq<string_cnt>,
phmap::priv::Allocator<string_cnt>,
12,
spinlock_mutex
>;
// Mimic the Perl get_properties subroutine ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
// convert positive number from string to uint32_t
inline uint32_t fast_atoll64(const char* str)
{
uint32_t val = 0;
uint8_t digit;
while ((digit = uint8_t(*str++ - '0')) <= 9)
val = val * 10 + digit;
return val;
}
// Helper function to find a character.
inline char* find_char(char* first, char* last, char c)
{
while (first != last) {
if (*first == c) break;
++first;
}
return first;
}
// Limit chunk size and line length.
inline constexpr size_t CHUNK_SIZE = 32768;
inline constexpr size_t MAX_LINE_LEN = 255;
static int64_t get_properties(
const char* fname, // in : the input file name
string_cnt_set_t& set_ret) // inout : the set to be updated
{
int64_t num_lines = 0;
std::ifstream fin(fname, std::ifstream::binary);
if (!fin.is_open()) {
std::cerr << "Error opening '" << fname << "' : " << strerror(errno) << '\n';
return num_lines;
}
#pragma omp parallel reduction(+:num_lines)
{
std::string buf;
buf.resize(CHUNK_SIZE + MAX_LINE_LEN + 1, '\0');
while (fin.good()) {
size_t len = 0;
// Read the next chunk serially.
#pragma omp critical
{
fin.read(&buf[0], CHUNK_SIZE);
if ((len = fin.gcount()) > 0) {
if (buf[len - 1] != '\n' && fin.getline(&buf[len], MAX_LINE_LEN)) {
// Getline discards the newline char and appends null char.
// Therefore, change '\0' to '\n'.
len += fin.gcount();
buf[len - 1] = '\n';
}
}
}
if (!len)
break;
buf[len] = '\0';
char *first = &buf[0];
char *last = &buf[len];
// Process max Nthreads chunks concurrently.
while (first < last) {
char* beg_ptr{first};
char* end_ptr{find_char(first, last, '\n')};
char *found = find_char(beg_ptr, end_ptr, '\t');
if (found == end_ptr)
continue;
assert(*found == '\t');
*found = 0; // replace the tab with '\0'
int_type count = fast_atoll64(found + 1);
// Use lazy_emplace to modify the set while the mutex is locked.
set_ret.lazy_emplace_l(
beg_ptr,
[&](string_cnt_set_t::value_type& p) {
p.cnt += count; // called only when key was already present
},
[&](const string_cnt_set_t::constructor& ctor) {
ctor(beg_ptr, count); // construct value_type in place when key not present
}
);
first = end_ptr + 1;
++num_lines;
}
}
}
fin.close();
// std::cerr << "getprops done\n";
return num_lines;
}
// Output subroutine ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
size_t divide_up(size_t dividend, size_t divisor)
{
if (dividend % divisor)
return (size_t)(dividend / divisor) + 1;
else
return (size_t)(dividend / divisor);
}
static void out_properties(
const int nthds, // in : the number of threads
string_cnt_vector_t& vec) // in : the vector to output
{
size_t num_chunks = divide_up(vec.size(), CHUNK_SIZE);
int nthds_out = 1;
#ifdef _OPENMP
nthds_out = std::min(nthds, 6);
#endif
#pragma omp parallel for ordered schedule(static, 1) num_threads(nthds_out)
for (size_t chunk_id = 1; chunk_id <= num_chunks; ++chunk_id) {
std::string str(""); str.reserve(2048 * 1024);
auto it = vec.begin() + (chunk_id - 1) * CHUNK_SIZE;
auto it2 = vec.begin() + std::min(vec.size(), chunk_id * CHUNK_SIZE);
for (; it != it2; ++it) {
str.append(it->get());
str.append("\t", 1);
str.append(std::to_string(it->cnt));
str.append("\n", 1);
}
#pragma omp ordered
std::cout << str << std::flush;
}
}
typedef std::chrono::high_resolution_clock high_resolution_clock;
typedef std::chrono::high_resolution_clock::time_point time_point;
typedef std::chrono::milliseconds milliseconds;
double elaspe_time(time_point cend, time_point cstart) {
return double (
std::chrono::duration_cast<milliseconds>(cend - cstart).count()
) * 1e-3;
}
// ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
int main(int argc, char* argv[])
{
if (argc < 2) {
if (argc > 0)
std::cerr << "usage: llil4map file1 file2 ... >out.txt\n";
return 1;
}
std::cerr << std::setprecision(3) << std::setiosflags(std::ios::fixed);
std::cerr << "llil4map start\n";
#ifdef _OPENMP
std::cerr << "use OpenMP\n";
#else
std::cerr << "don't use OpenMP\n";
#endif
#if USE_BOOST_PARALLEL_SORT == 0
std::cerr << "don't use boost sort\n";
#else
std::cerr << "use boost sort\n";
#endif
time_point cstart1, cend1, cstart2, cend2, cstart3, cend3s, cend3;
cstart1 = high_resolution_clock::now();
#ifdef _OPENMP
// Determine the number of threads.
const char* env_nthds = std::getenv("NUM_THREADS");
int nthds = ( env_nthds && strlen(env_nthds) )
? ::atoi(env_nthds)
: std::thread::hardware_concurrency();
omp_set_dynamic(false);
omp_set_num_threads(nthds);
omp_set_max_active_levels(1);
int nthds_move = std::min(nthds, 6);
#else
int nthds = 1;
int nthds_move = 1;
#endif
// Get the list of input files from the command line
int nfiles = argc - 1;
char** fname = &argv[1];
// Store the properties into a vector
string_cnt_vector_t propvec;
int64_t num_lines = 0;
{
// Enclose the set inside a block, so GC releases the object
// immediately after exiting the scope.
string_cnt_set_t set;
for (int i = 0; i < nfiles; ++i)
num_lines += get_properties(fname[i], set);
cend1 = high_resolution_clock::now();
double ctaken1 = elaspe_time(cend1, cstart1);
std::cerr << "get properties " << std::setw(8) << ctaken1 << " secs\n";
if (set.size() == 0) {
std::cerr << "No work, exiting...\n";
return 1;
}
cstart2 = high_resolution_clock::now();
if (nthds == 1) {
propvec.reserve(set.size());
for (auto& x : set)
propvec.push_back(std::move(const_cast<string_cnt&>(x)));
set.clear();
}
else {
propvec.resize(set.size());
std::vector<string_cnt_vector_t::iterator> I(set.subcnt());
auto cur = propvec.begin();
for (size_t i = 0; i < set.subcnt(); ++i) {
set.with_submap(i, [&](const string_cnt_set_t::EmbeddedSet& set) {
I[i] = cur;
cur += set.size();
});
}
#pragma omp parallel for schedule(static, 1) num_threads(nthds_move)
for (size_t i = 0; i < set.subcnt(); ++i) {
set.with_submap_m(i, [&](string_cnt_set_t::EmbeddedSet& set) {
auto it = I[i];
for (auto& x : set)
*it++ = std::move(const_cast<string_cnt&>(x)); // force move
// reset the set (no longer needed) to reclaim memory early
set = string_cnt_set_t::EmbeddedSet();
});
}
}
cend2 = high_resolution_clock::now();
double ctaken2 = elaspe_time(cend2, cstart2);
std::cerr << "map to vector " << std::setw(8) << ctaken2 << " secs\n";
}
cstart3 = high_resolution_clock::now();
// Sort the vector by (count) in reverse order, (name) in lexical order
auto reverse_order = [](const string_cnt& left, const string_cnt& right) {
return left.cnt != right.cnt ? left.cnt > right.cnt : left < right;
};
#if USE_BOOST_PARALLEL_SORT == 0
// Standard sort
std::sort(propvec.begin(), propvec.end(), reverse_order);
#else
// Parallel sort
boost::sort::block_indirect_sort(propvec.begin(), propvec.end(), reverse_order, nthds);
#endif
cend3s = high_resolution_clock::now();
// Output the sorted vector
out_properties(nthds, propvec);
cend3 = high_resolution_clock::now();
double ctaken = elaspe_time(cend3, cstart1);
double ctaken3s = elaspe_time(cend3s, cstart3);
double ctaken3o = elaspe_time(cend3, cend3s);
std::cerr << "vector stable sort " << std::setw(8) << ctaken3s << " secs\n";
std::cerr << "write stdout " << std::setw(8) << ctaken3o << " secs\n";
std::cerr << "total time " << std::setw(8) << ctaken << " secs\n";
std::cerr << " count lines " << num_lines << "\n";
std::cerr << " count unique " << propvec.size() << "\n";
// Hack to see Private Bytes in Windows Task Manager
// (uncomment next line so process doesn't exit too quickly)
// std::this_thread::sleep_for(milliseconds(9000));
return 0;
}
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