1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337
|
/*=========================================================================
Program: Visualization Toolkit
Module: vtkBoostBreadthFirstSearchTree.cxx
Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
All rights reserved.
See Copyright.txt or http://www.kitware.com/Copyright.htm for details.
This software is distributed WITHOUT ANY WARRANTY; without even
the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
PURPOSE. See the above copyright notice for more information.
=========================================================================*/
/*-------------------------------------------------------------------------
Copyright 2008 Sandia Corporation.
Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
the U.S. Government retains certain rights in this software.
-------------------------------------------------------------------------*/
#include "vtkBoostBreadthFirstSearchTree.h"
#include "vtkCellArray.h"
#include "vtkCellData.h"
#include "vtkMath.h"
#include "vtkIdTypeArray.h"
#include "vtkInformation.h"
#include "vtkInformationVector.h"
#include "vtkObjectFactory.h"
#include "vtkPointData.h"
#include "vtkPoints.h"
#include "vtkFloatArray.h"
#include "vtkDataArray.h"
#include "vtkSmartPointer.h"
#include "vtkStringArray.h"
#include "vtkBoostGraphAdapter.h"
#include "vtkMutableDirectedGraph.h"
#include "vtkUndirectedGraph.h"
#include "vtkTree.h"
#include <boost/graph/breadth_first_search.hpp>
#include <boost/graph/reverse_graph.hpp>
#include <boost/pending/queue.hpp>
using namespace boost;
vtkStandardNewMacro(vtkBoostBreadthFirstSearchTree);
#if BOOST_VERSION >= 104800 // Boost 1.48.x
namespace {
vtkIdType unwrap_edge_id(vtkEdgeType const &e)
{
return e.Id;
}
vtkIdType unwrap_edge_id(boost::detail::reverse_graph_edge_descriptor<vtkEdgeType> const &e)
{
# if BOOST_VERSION == 104800
return e.underlying_desc.Id;
# else
return e.underlying_descx.Id;
# endif
}
}
#endif
// Redefine the bfs visitor, the only visitor we
// are using is the tree_edge visitor.
template <typename IdMap>
class bfs_tree_builder : public default_bfs_visitor
{
public:
bfs_tree_builder()
{ }
bfs_tree_builder(IdMap& g2t, IdMap& t2g, vtkGraph* g, vtkMutableDirectedGraph* t, vtkIdType root)
: graph_to_tree(g2t), tree_to_graph(t2g), tree(t), graph(g)
{
double x[3];
graph->GetPoints()->GetPoint(root, x);
tree->GetPoints()->InsertNextPoint(x);
vtkIdType tree_root = t->AddVertex();
put(graph_to_tree, root, tree_root);
put(tree_to_graph, tree_root, root);
tree->GetVertexData()->CopyData(graph->GetVertexData(), root, tree_root);
}
template <typename Edge, typename Graph>
void tree_edge(Edge e, const Graph& g) const
{
typename graph_traits<Graph>::vertex_descriptor u, v;
u = source(e, g);
v = target(e, g);
// Get the source vertex id (it has already been visited).
vtkIdType tree_u = get(graph_to_tree, u);
// Add the point before the vertex so that
// points match the number of vertices, so that GetPoints()
// doesn't reallocate and zero-out points.
double x[3];
graph->GetPoints()->GetPoint(v, x);
tree->GetPoints()->InsertNextPoint(x);
// Create the target vertex in the tree.
vtkIdType tree_v = tree->AddVertex();
vtkEdgeType tree_e = tree->AddEdge(tree_u, tree_v);
// Store the mapping from graph to tree.
put(graph_to_tree, v, tree_v);
put(tree_to_graph, tree_v, v);
// Copy the vertex and edge data from the graph to the tree.
tree->GetVertexData()->CopyData(graph->GetVertexData(), v, tree_v);
#if BOOST_VERSION < 104800 // Boost 1.48.x
tree->GetEdgeData()->CopyData(graph->GetEdgeData(), e.Id, tree_e.Id);
#else
tree->GetEdgeData()->CopyData(graph->GetEdgeData(),
unwrap_edge_id(e), tree_e.Id);
#endif
}
private:
IdMap graph_to_tree;
IdMap tree_to_graph;
vtkMutableDirectedGraph *tree;
vtkGraph *graph;
};
// Constructor/Destructor
vtkBoostBreadthFirstSearchTree::vtkBoostBreadthFirstSearchTree()
{
// Default values for the origin vertex
this->OriginVertexIndex = 0;
this->ArrayName = 0;
this->SetArrayName("Not Set");
this->ArrayNameSet = false;
this->OriginValue = 0;
this->CreateGraphVertexIdArray = false;
this->ReverseEdges = false;
}
vtkBoostBreadthFirstSearchTree::~vtkBoostBreadthFirstSearchTree()
{
this->SetArrayName(NULL);
}
// Description:
// Set the index (into the vertex array) of the
// breadth first search 'origin' vertex.
void vtkBoostBreadthFirstSearchTree::SetOriginVertex(vtkIdType index)
{
this->OriginVertexIndex = index;
this->ArrayNameSet = false;
this->Modified();
}
// Description:
// Set the breadth first search 'origin' vertex.
// This method is basically the same as above
// but allows the application to simply specify
// an array name and value, instead of having to
// know the specific index of the vertex.
void vtkBoostBreadthFirstSearchTree::SetOriginVertex(
vtkStdString arrayName, vtkVariant value)
{
this->SetArrayName(arrayName);
this->ArrayNameSet = true;
this->OriginValue = value;
this->Modified();
}
vtkIdType vtkBoostBreadthFirstSearchTree::GetVertexIndex(
vtkAbstractArray *abstract,vtkVariant value)
{
// Okay now what type of array is it
if (abstract->IsNumeric())
{
vtkDataArray *dataArray = vtkDataArray::SafeDownCast(abstract);
int intValue = value.ToInt();
for(int i=0; i<dataArray->GetNumberOfTuples(); ++i)
{
if (intValue == static_cast<int>(dataArray->GetTuple1(i)))
{
return i;
}
}
}
else
{
vtkStringArray *stringArray = vtkStringArray::SafeDownCast(abstract);
vtkStdString stringValue(value.ToString());
for(int i=0; i<stringArray->GetNumberOfTuples(); ++i)
{
if (stringValue == stringArray->GetValue(i))
{
return i;
}
}
}
// Failed
vtkErrorMacro("Did not find a valid vertex index...");
return 0;
}
int vtkBoostBreadthFirstSearchTree::FillInputPortInformation(
int vtkNotUsed(port), vtkInformation* info)
{
info->Set(vtkAlgorithm::INPUT_REQUIRED_DATA_TYPE(), "vtkGraph");
return 1;
}
int vtkBoostBreadthFirstSearchTree::RequestData(
vtkInformation *vtkNotUsed(request),
vtkInformationVector **inputVector,
vtkInformationVector *outputVector)
{
// get the info objects
vtkInformation *inInfo = inputVector[0]->GetInformationObject(0);
vtkInformation *outInfo = outputVector->GetInformationObject(0);
// get the input and output
vtkGraph *input = vtkGraph::SafeDownCast(
inInfo->Get(vtkDataObject::DATA_OBJECT()));
// Now figure out the origin vertex of the
// breadth first search
if (this->ArrayNameSet)
{
vtkAbstractArray* abstract = input->GetVertexData()->GetAbstractArray(this->ArrayName);
// Does the array exist at all?
if (abstract == NULL)
{
vtkErrorMacro("Could not find array named " << this->ArrayName);
return 0;
}
this->OriginVertexIndex = this->GetVertexIndex(abstract,this->OriginValue);
}
// Create tree to graph id map array
vtkIdTypeArray* treeToGraphIdMap = vtkIdTypeArray::New();
// Create graph to tree id map array
vtkIdTypeArray* graphToTreeIdMap = vtkIdTypeArray::New();
// Create a color map (used for marking visited nodes)
vector_property_map<default_color_type> color;
// Create a queue to hand off to the BFS
queue<int> q;
// Create the mutable graph to build the tree
vtkSmartPointer<vtkMutableDirectedGraph> temp =
vtkSmartPointer<vtkMutableDirectedGraph>::New();
// Initialize copying data into tree
temp->GetFieldData()->PassData(input->GetFieldData());
temp->GetVertexData()->CopyAllocate(input->GetVertexData());
temp->GetEdgeData()->CopyAllocate(input->GetEdgeData());
// Create the visitor which will build the tree
bfs_tree_builder<vtkIdTypeArray*> builder(
graphToTreeIdMap, treeToGraphIdMap, input, temp, this->OriginVertexIndex);
// Run the algorithm
if (vtkDirectedGraph::SafeDownCast(input))
{
vtkDirectedGraph *g = vtkDirectedGraph::SafeDownCast(input);
if (this->ReverseEdges)
{
#if BOOST_VERSION < 104100 // Boost 1.41.x
vtkErrorMacro("ReverseEdges requires Boost 1.41.x or higher");
return 0;
#else
boost::reverse_graph<vtkDirectedGraph*> r(g);
breadth_first_search(r, this->OriginVertexIndex, q, builder, color);
#endif
}
else
{
breadth_first_search(g, this->OriginVertexIndex, q, builder, color);
}
}
else
{
vtkUndirectedGraph *g = vtkUndirectedGraph::SafeDownCast(input);
breadth_first_search(g, this->OriginVertexIndex, q, builder, color);
}
// If the user wants it, store the mapping back to graph vertices
if (this->CreateGraphVertexIdArray)
{
treeToGraphIdMap->SetName("GraphVertexId");
temp->GetVertexData()->AddArray(treeToGraphIdMap);
}
// Copy the builder graph structure into the output tree
vtkTree *output = vtkTree::SafeDownCast(
outInfo->Get(vtkDataObject::DATA_OBJECT()));
if (!output->CheckedShallowCopy(temp))
{
vtkErrorMacro(<<"Invalid tree.");
return 0;
}
// Clean up
output->Squeeze();
graphToTreeIdMap->Delete();
treeToGraphIdMap->Delete();
return 1;
}
void vtkBoostBreadthFirstSearchTree::PrintSelf(ostream& os, vtkIndent indent)
{
this->Superclass::PrintSelf(os, indent);
os << indent << "OriginVertexIndex: " << this->OriginVertexIndex << endl;
os << indent << "ArrayName: "
<< (this->ArrayName ? this->ArrayName : "(none)") << endl;
os << indent << "OriginValue: " << this->OriginValue.ToString() << endl;
os << indent << "ArrayNameSet: "
<< (this->ArrayNameSet ? "true" : "false") << endl;
os << indent << "CreateGraphVertexIdArray: "
<< (this->CreateGraphVertexIdArray ? "on" : "off") << endl;
os << indent << "ReverseEdges: "
<< (this->ReverseEdges ? "on" : "off") << endl;
}
|