File: PbiBarcodeReverseFilter.txt

package info (click to toggle)
pbbam 1.6.0%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: bullseye
  • size: 13,812 kB
  • sloc: cpp: 57,023; xml: 2,749; ansic: 869; python: 534; sh: 277; makefile: 187
file content (15 lines) | stat: -rw-r--r-- 441 bytes parent folder | download | duplicates (8)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
// single value
PbiFilter filter{ PbiBarcodeReverseFilter{50} };
PbiFilterQuery query(filter);
for (const BamRecord& record : query) {
    assert(record.BarcodeReverse() == 50);
}

// whitelist
vector<int16_t> whitelist = { 50, 100 };
PbiFilter filter{ PbiBarcodeReverseFilter{whitelist} };
PbiFilterQuery query(filter);
for (const BamRecord& record : query) {
    assert(record.BarcodeReverse() == 50 || record.BarcodeReverse() == 100);
}