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#ifndef _SIMULATOR_CONTEXT_SAMPLE_HPP_
#define _SIMULATOR_CONTEXT_SAMPLE_HPP_
#include<string>
#include<vector>
#include<iostream>
#include "QualitySample.hpp"
#include "../statistics/StatUtils.hpp"
class ContextSample {
public:
std::vector<QualitySample> samples;
size_t minSamples;
size_t maxSamples;
int reachedMinSamples;
ContextSample();
size_t GetNSamples();
int AppendSample(SMRTSequence &seq, DNALength pos);
QualitySample* GetRandomQualitySample();
void Write(std::ofstream &out);
void Read(std::ifstream &in);
};
#endif
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