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#ifndef _BLASR_HDF_NEW_BAS_READER_HPP_
#define _BLASR_HDF_NEW_BAS_READER_HPP_
#include <stdlib.h>
#include <sstream>
#include <vector>
#include "HDFArray.hpp"
#include "HDFGroup.hpp"
const int BAXPERBAS = 3; // Number of bax files per base file.
class HDFNewBasReader {
// The new bas.h5 file contains:
// /MultiPart group,
// /MultiPart/HoleLookup Dataset (which is ignored), and
// /MultiPart/Parts Dataset.
public:
H5::H5File hdfBasFile;
HDFGroup rootGroup;
HDFGroup multiPartGroup;
//HDFArray<std::string> partsArray;
HDFStringArray partsArray;
std::string basFileName;
HDFNewBasReader() {
basFileName = "";
}
int Initialize (const std::string & hdfBasFileName);
std::vector<std::string> GetBaxMovieNames();
std::vector<std::string> GetBaxFileNames();
void Close();
};
#endif
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