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#include "ReadType.hpp"
ReadType::ReadTypeEnum ReadType::ParseReadType(std::string &readTypeString) {
if (readTypeString == "Standard") {
return ReadType::Standard;
}
else if (readTypeString == "CCS") {
return ReadType::CCS;
}
else if (readTypeString == "RCCS") {
return ReadType::RCCS;
}
else if (readTypeString == "POLYMERASE") {
return ReadType::POLYMERASE;
}
else if (readTypeString == "HQREGION") {
return ReadType::HQREGION;
}
else if (readTypeString == "SUBREAD") {
return ReadType::SUBREAD;
}
else if (readTypeString == "SCRAP") {
return ReadType::SCRAP;
}
else if (readTypeString == "UNKNOWN") {
return ReadType::UNKNOWN;
}
else {
return ReadType::NoReadType;
}
}
std::string ReadType::ToString(const ReadType::ReadTypeEnum & readType) {
if (readType == ReadType::Standard) return "Standard";
if (readType == ReadType::CCS) return "CCS";
if (readType == ReadType::RCCS) return "RCCS";
if (readType == ReadType::HQREGION) return "HQREGION";
if (readType == ReadType::POLYMERASE) return "POLYMERASE";
if (readType == ReadType::SUBREAD) return "SUBREAD";
if (readType == ReadType::SCRAP) return "SCRAP";
if (readType == ReadType::UNKNOWN) return "UNKNOWN";
return "NoReadType";
}
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