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#include "gtest/gtest.h"
#include "HDFScanDataReader.hpp"
#include "pbdata/testdata.h"
using namespace std;
using namespace H5;
class HDFScanDataReaderTEST : public ::testing::Test {
public:
virtual void SetUp() {
fileName = scanDataFile1;
try{
hdfFile.openFile(fileName.c_str(), H5F_ACC_RDONLY);
ASSERT_EQ(rootGroup.Initialize(hdfFile, "/"), 1);
ASSERT_EQ(reader.Initialize(dynamic_cast<HDFGroup*>(&rootGroup)), 1);
} catch(H5::Exception & e) {
cerr << "Failed to open " << fileName << endl;
ASSERT_FALSE(true);
}
}
virtual void TearDown() {
reader.Close();
hdfFile.close();
}
string fileName;
H5::H5File hdfFile;
HDFGroup rootGroup;
HDFScanDataReader reader;
};
TEST_F(HDFScanDataReaderTEST, ReadBindingKit) {
string bindingKit;
EXPECT_EQ(reader.ReadBindingKit(bindingKit), 1);
EXPECT_EQ(bindingKit, "100356300");
// Test if bindkingKit can be read multiple times.
EXPECT_EQ(reader.ReadBindingKit(bindingKit), 1);
EXPECT_EQ(bindingKit, "100356300");
}
TEST_F(HDFScanDataReaderTEST, ReadSequencingKit) {
string sequencingKit;
EXPECT_EQ(reader.ReadSequencingKit(sequencingKit), 1);
EXPECT_EQ(sequencingKit, "100356200");
// Test if sequencingKit can be read multiple times.
EXPECT_EQ(reader.ReadSequencingKit(sequencingKit), 1);
EXPECT_EQ(sequencingKit, "100356200");
}
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