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/*
* ==================================================================
*
* Filename: ReadType_gtest.cpp
*
* Description: Test pbdata/reads/ReadType.hpp
*
* Version: 1.0
* Created: 11/29/2012 03:54:55 PM
* Revision: 08/20/2014
* Compiler: gcc
*
* Author: Yuan Li (yli), yli@pacificbiosciences.com
* Company: Pacific Biosciences
*
* ==================================================================
*/
#include "gtest/gtest.h"
#include "reads/ReadType.hpp"
using namespace std;
string standard = "Standard";
string ccs = "CCS";
string rccs = "RCCS";
string noreadtype = "standard";
string subread = "SUBREAD";
string polymerase = "POLYMERASE";
string hqregion = "HQREGION";
string scarp = "SCARP";
string unknown = "UNKNOWN";
TEST(ReadTypeTest, ParseReadType) {
EXPECT_EQ(ReadType::ParseReadType(standard), ReadType::Standard);
EXPECT_EQ(ReadType::ParseReadType(ccs), ReadType::CCS);
EXPECT_EQ(ReadType::ParseReadType(rccs), ReadType::RCCS);
EXPECT_EQ(ReadType::ParseReadType(noreadtype), ReadType::NoReadType);
EXPECT_EQ(ReadType::ParseReadType(subread), ReadType::SUBREAD);
EXPECT_EQ(ReadType::ParseReadType(hqregion), ReadType::HQREGION);
EXPECT_EQ(ReadType::ParseReadType(polymerase), ReadType::POLYMERASE);
EXPECT_EQ(ReadType::ParseReadType(unknown), ReadType::UNKNOWN);
}
TEST(ReadTypeTest, ToString) {
EXPECT_EQ(ReadType::ToString(ReadType::Standard), standard);
EXPECT_EQ(ReadType::ToString(ReadType::CCS), ccs);
EXPECT_EQ(ReadType::ToString(ReadType::RCCS), rccs);
EXPECT_EQ(ReadType::ToString(ReadType::NoReadType), "NoReadType");
EXPECT_EQ(ReadType::ToString(ReadType::SUBREAD), subread);
EXPECT_EQ(ReadType::ToString(ReadType::HQREGION), hqregion);
EXPECT_EQ(ReadType::ToString(ReadType::POLYMERASE), polymerase);
EXPECT_EQ(ReadType::ToString(ReadType::UNKNOWN), unknown);
}
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