File: ReverseCompressIndex.hpp

package info (click to toggle)
pbseqlib 5.3.1%2Bdfsg-2.1
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 7,136 kB
  • sloc: cpp: 77,246; python: 570; makefile: 312; sh: 111; ansic: 9
file content (27 lines) | stat: -rw-r--r-- 501 bytes parent folder | download | duplicates (5) 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
 
#ifndef _BLASR_REVERSE_COMPRESS_INDEX_HPP_
#define _BLASR_REVERSE_COMPRESS_INDEX_HPP_

#include <fstream>

class ReverseCompressIndex
{
public:
    int *index;
    int indexLength;
    int binSize;
    int maxRun;
    int size() { return indexLength; }

    ReverseCompressIndex();
    ~ReverseCompressIndex();

    void Write(std::ofstream &out);

    void Read(std::ifstream &in);

    void ShallowCopy(ReverseCompressIndex &rhs);

    void Free();
};

#endif  // _BLASR_REVERSE_COMPRESS_INDEX_HPP_