1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
|
all:
THISDIR:=$(dir $(realpath $(lastword $(MAKEFILE_LIST))))
-include ${CURDIR}/defines.mk
include ${THISDIR}/../rules.mk
CXXOPTS += -std=c++14 -pedantic -Wall -Wextra
# CURDIR should have LibBlasrConfig.h
#INCLUDES += ${CURDIR}
SYSINCLUDES = ${PBBAM_INC} ${BOOST_INC}
LIBS += ${PBBAM_LIB}
LDFLAGS += $(patsubst %,-L%,${LIBS}) $(HTSLIB_LIBS)
all: static shared
static: libpbdata.a
shared: libpbdata${SH_LIB_EXT}
paths := . matrix reads metagenome qvs saf utils loadpulses alignment amos sam
paths := ${paths} $(patsubst %,${THISDIR}%,${paths})
sources := $(shell find ${THISDIR} -name '*.cpp')
sources := $(notdir ${sources})
objects := $(sources:.cpp=.o)
shared_objects := $(sources:.cpp=.shared.o)
dependencies := $(objects:.o=.d) $(shared_objects:.o=.d)
vpath %.cpp ${paths}
libpbdata.a: $(objects)
$(AR) $(ARFLAGS) $@ $^
libpbdata${SH_LIB_EXT}: $(shared_objects)
LibBlasrConfig.h:
echo "Please run 'configure.py' with appropriate args to generate pbdata/LibBlasrConfig.h"
clean:
rm -f libpbdata.a libpbdata.so *.o *.d
-include $(dependencies)
depend: $(dependencies:.d=.depend)
|
