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|
project(
'libblasr',
'cpp',
version : '5.3.5',
default_options : [
'buildtype=release',
'warning_level=3',
'cpp_std=c++17',
'default_library=both',
'b_ndebug=false'],
license : 'BSD-3',
meson_version : '>= 0.52.0')
# TODO:
# try to reenable 'b_ndebug=true'
# this will require replacing a number of asserts
# with proper throw statements
############
# CXXFLAGS #
############
libblasr_warning_flags = []
cpp = meson.get_compiler('cpp')
foreach cflag: [
'-Wno-delete-non-virtual-dtor',
'-Wno-unused-variable',
'-Wno-non-virtual-dtor']
if cpp.has_argument(cflag)
libblasr_warning_flags += cflag
endif
endforeach
if cpp.get_id() == 'clang'
foreach cflag: [
'-Wno-unused-local-typedef',
'-Wno-overloaded-virtual',
'-Wno-keyword-macro']
if cpp.has_argument(cflag)
libblasr_warning_flags += cflag
endif
endforeach
endif
################
# dependencies #
################
# boost
libblasr_boost_dep = dependency('boost', include_type : 'system', required : true)
# pbbam
libblasr_pbbam_dep = dependency('pbbam', fallback : ['pbbam', 'pbbam_dep'])
# zlib
libblasr_zlib_dep = dependency('zlib', required : true, fallback : ['zlib', 'zlib_dep'])
# htslib
libblasr_htslib_dep = dependency('htslib', required : true, version : '>=1.4', fallback : ['htslib', 'htslib_dep'])
# clock_gettime on old glibc systems
libblasr_rt_dep = cpp.find_library('rt', required : false)
# Explicitely list required HDF5 components
# hdf5_dep = dependency('hdf5', language : 'c', required: true)
hdf5_dep = dependency('hdf5', language : 'cpp', required : false, disabler: true)
libblasr_deps = [
libblasr_boost_dep,
libblasr_pbbam_dep,
libblasr_zlib_dep,
libblasr_htslib_dep,
libblasr_rt_dep,
hdf5_dep]
##########
# Config #
##########
libblasr_libconfig_h_config = configuration_data()
libblasr_libconfig_h_config.set('USE_PBBAM', 1)
libblasr_libconfig_h = configure_file(output : 'LibBlasrConfig.h', configuration : libblasr_libconfig_h_config)
if not meson.is_subproject()
install_headers(
libblasr_libconfig_h,
subdir : 'libblasr')
endif
#####################
# sources + library #
#####################
# install library if
# - either running as a proper project
# - or using shared libraries
libblasr_lib_install = (not meson.is_subproject()) or (get_option('default_library') == 'shared')
libblasr_sources = [libblasr_libconfig_h]
libblasr_include_directories = include_directories('.')
subdir('hdf')
subdir('alignment')
subdir('pbdata')
libblasr_lib = library(
'blasr', [
libblasr_libconfig_h,
libblasr_sources],
install : libblasr_lib_install,
# use boost SONAME practice:
# cause ld startup issues before
# you even have the chance of running
# into ABI issues.
soversion : meson.project_version(),
version : meson.project_version(),
include_directories : libblasr_include_directories,
dependencies : libblasr_deps,
cpp_args : libblasr_warning_flags)
#########
# tests #
#########
if (not meson.is_subproject()) and get_option('tests')
libblasr_clang_formatter = find_program('tools/check-formatting')
subdir('unittest')
endif
###################
# dependency info #
###################
if not meson.is_subproject()
import('pkgconfig').generate(
libraries : libblasr_lib,
version : meson.project_version(),
name : 'libblasr',
requires : 'pbbam',
filebase : 'libblasr',
subdirs : 'libblasr',
description : 'Library routines used by the PacBio BLASR aligner')
endif
libblasr_dep = declare_dependency(
include_directories : libblasr_include_directories,
link_with : libblasr_lib,
dependencies : libblasr_deps,
version : meson.project_version(),
sources : libblasr_libconfig_h)
|
