File: BWTSearchImpl.hpp

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#ifndef _BLASR_BWT_SEARCH_IMPL_HPP_
#define _BLASR_BWT_SEARCH_IMPL_HPP_

template <typename T_MappingBuffers>
int MapReadToGenome(BWT &bwt, FASTASequence &seq, std::vector<ChainedMatchPos> &matchPosList,
                    AnchorParameters &params, int &numBasesAnchored,
                    T_MappingBuffers &mappingBuffers)
{
    return MapReadToGenome(bwt, seq, matchPosList, params, numBasesAnchored, mappingBuffers.spv,
                           mappingBuffers.epv);
}

#endif