File: CompareSequencesPrinter.cpp

package info (click to toggle)
pbseqlib 5.3.5%2Bdfsg-4
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 7,020 kB
  • sloc: cpp: 77,250; python: 331; sh: 103; makefile: 41
file content (9 lines) | stat: -rw-r--r-- 342 bytes parent folder | download | duplicates (4) 
1
2
3
4
5
6
7
8
9
 
#include <alignment/format/CompareSequencesPrinter.hpp>

void CompareSequencesOutput::PrintHeader(std::ostream &out)
{
    out << "qName qLength qStart qEnd qStrand "
        << "tName tLength tStart tEnd tStrand "
        << "score numMatch numMismatch numIns numDel "
        << "mapQV qAlignedSeq matchPattern tAlignedSeq" << std::endl;
}