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/*
* ============================================================================
*
* Filename: RangeUtils.h
*
* Description: Parse a list of ranges separated by commas.
* Designed for specifying a set of holeNumbers to analyze.
*
* Version: 1.0
* Created: 05/02/2013 12:51:27 PM
* Revision: none
* Compiler: gcc
*
* Author: Yuan Li (yli), yli@pacificbiosciences.com
* Company: Pacific Biosciences
*
* ============================================================================
*/
#include <algorithm>
#include <cstdlib>
#include <pbdata/Types.h>
#include <pbdata/StringUtils.hpp>
class Range
{
public:
UInt start; // Start position of a range, inclusive
UInt end; // End position of a range, inclusive
Range(UInt pStart);
Range(UInt pStart, UInt pEnd);
bool contains(const UInt& query);
bool operator<(const Range& pRange) const;
};
// Input is a comma-delimited string of ranges.
// e.g. 1,2,3,10-20
bool ParseRanges(std::string& rangesStr, std::vector<Range>& ranges);
class Ranges
{
public:
std::vector<Range> ranges;
Ranges(std::string rangesStr = "");
bool setRanges(std::string rangesStr);
int size();
UInt max();
bool contains(const UInt& query);
};
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