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##################
# Subdirectories #
##################
subdir('alignment')
subdir('amos')
subdir('loadpulses')
subdir('matrix')
subdir('metagenome')
subdir('qvs')
subdir('reads')
subdir('saf')
subdir('sam')
subdir('utils')
###########
# Sources #
###########
libblasr_sources += files([
'BlasrFASTAReader.cpp',
'BlasrFASTQReader.cpp',
'CCSSequence.cpp',
'ChangeListID.cpp',
'CommandLineParser.cpp',
'DNASequence.cpp',
'FASTASequence.cpp',
'FASTQSequence.cpp',
'GFFFile.cpp',
'MD5Utils.cpp',
'NucConversion.cpp',
'PackedDNASequence.cpp',
'ReverseCompressIndex.cpp',
'SMRTSequence.cpp',
'StringUtils.cpp'])
###########
# Headers #
###########
meson.is_subproject() and subdir_done()
install_headers(
files([
'CCSSequence.hpp',
'ChangeListID.hpp',
'CommandLineParser.hpp',
'Compare4BitCompressed.hpp',
'CompressedDNASequence.hpp',
'CompressedSequence.hpp',
'CompressedSequenceImpl.hpp',
'defs.h',
'DNASequence.hpp',
'Enumerations.h',
'FASTAReader.hpp',
'FASTASequence.hpp',
'FASTQReader.hpp',
'FASTQSequence.hpp',
'GFFFile.hpp',
'MD5Utils.hpp',
'MD5UtilsImpl.hpp',
'NucConversion.hpp',
'PacBioDefs.h',
'PackedDNASequence.hpp',
'PrettyException.hpp',
'ReverseCompressIndex.hpp',
'SeqUtils.hpp',
'SeqUtilsImpl.hpp',
'SMRTSequence.hpp',
'StringUtils.hpp',
'Types.h',
'utils.hpp',
'utilsImpl.hpp',
'VectorUtils.hpp']),
subdir : 'libblasr/pbdata')
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