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Source: perm
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13), libbsd-dev
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/perm
Vcs-Git: https://salsa.debian.org/med-team/perm.git
Rules-Requires-Root: no
Package: perm
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Description: efficient mapping of short reads with periodic spaced seeds
PerM is a software package which was designed to perform highly efficient
genome scale alignments for hundreds of millions of short reads produced by
the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of
providing full sensitivity for alignments within 4 mismatches for 50bp SOLID
reads and 9 mismatches for 100bp Illumina reads.
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