File: setup.py

package info (click to toggle)
petsc 3.18.5%2Bdfsg1-1
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 523,616 kB
  • sloc: ansic: 740,865; cpp: 41,511; python: 36,523; f90: 16,706; makefile: 12,524; javascript: 11,855; sh: 1,007; xml: 619; objc: 445; java: 13; csh: 1
file content (313 lines) | stat: -rwxr-xr-x 10,510 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
#!/usr/bin/env python3

"""
PETSc: Portable, Extensible Toolkit for Scientific Computation
==============================================================

The Portable, Extensible Toolkit for Scientific Computation (PETSc),
is a suite of data structures and routines for the scalable (parallel)
solution of scientific applications modeled by partial differential
equations. It employs the Message Passing Interface (MPI) standard for
all message-passing communication.

.. note::

   To install ``PETSc`` and ``petsc4py`` (``mpi4py`` is optional
   but highly recommended) use::

     $ python -m pip install numpy mpi4py  (or pip install numpy mpi4py)
     $ python -m pip install petsc petsc4py (or pip install petsc petsc4py)

.. tip::

  You can also install the in-development versions with::

    $ python -m pip install Cython numpy mpi4py
    $ python -m pip install --no-deps https://gitlab.com/petsc/petsc/-/archive/main/petsc-main.tar.gz

  To set the MPI compilers use the environmental variables ``MPICC``, ``MPICXX``, ``MPIF90``.

  Provide any ``PETSc`` ./configure options using the environmental variable ``PETSC_CONFIGURE_OPTIONS``.

  Do not use the ``PETSc`` ``./configure`` options ``--with-cc``, ``--with-cxx``, ``--with-fc``, or ``--with-mpi-dir``.

  If ``mpi4py`` is installed the compilers will obtained from that installation and ``MPICC``, ``MPICXX``, ``MPIF90`` will be ignored.

"""

import sys, os
from setuptools import setup
from setuptools.command.install import install as _install
from distutils.util import get_platform, split_quoted
from distutils.spawn import find_executable
from distutils import log

init_py = """\
# Author:  PETSc Team
# Contact: petsc-maint@mcs.anl.gov

def get_petsc_dir():
    import os
    return os.path.dirname(__file__)

def get_config():
    conf = {}
    conf['PETSC_DIR'] = get_petsc_dir()
    return conf
"""

metadata = {
    'provides' : ['petsc'],
    'zip_safe' : False,
}

CONFIGURE_OPTIONS = []

def bootstrap():
    # Set PETSC_DIR and PETSC_ARCH
    PETSC_DIR  = os.path.abspath(os.getcwd())
    PETSC_ARCH = 'arch-python-' + get_platform()
    os.environ['PETSC_DIR']  = PETSC_DIR
    os.environ['PETSC_ARCH'] = PETSC_ARCH
    sys.path.insert(0, os.path.join(PETSC_DIR, 'config'))
    sys.path.insert(0, os.path.join(PETSC_DIR, 'lib','petsc','conf'))
    # Generate package __init__.py file
    from distutils.dir_util import mkpath
    pkgdir = os.path.join('config', 'pypi')
    if not os.path.exists(pkgdir): mkpath(pkgdir)
    pkgfile = os.path.join(pkgdir, '__init__.py')
    fh = open(pkgfile, 'w')
    fh.write(init_py)
    fh.close()
    # Configure options
    options = os.environ.get('PETSC_CONFIGURE_OPTIONS', '')
    CONFIGURE_OPTIONS.extend(split_quoted(options))
    for i in CONFIGURE_OPTIONS:
        if i.startswith('--with-mpi-dir='):
            raise RuntimeError("Do not use --with-mpi-dir, use the environmental variables MPICC, MPICXX, MPIF90")
        if i.startswith('--with-cc='):
            raise RuntimeError("Do not use --with-cc, use the environmental variable MPICC")
        if i.startswith('--with-cxx=') and i != "--with-cxx=0":
            raise RuntimeError("Do not use --with-cxx, use the environmental variable MPICXX")
        if i.startswith('--with-fc=') and i != "--with-fc=0":
            raise RuntimeError("Do not use --with-fc, use the environmental variable MPIF90")

    if '--with-mpi=0' not in CONFIGURE_OPTIONS:
        # Simple-minded lookup for MPI and mpi4py
        mpi4py = mpicc = None
        try:
            import mpi4py
            conf = mpi4py.get_config()
            mpicc = conf.get('mpicc')
        except ImportError: # mpi4py is not installed
            mpi4py = None
            mpicc = (os.environ.get('MPICC') or
                     find_executable('mpicc'))
        except AttributeError: # mpi4py is too old
            pass
        if not mpi4py and mpicc:
            metadata['install_requires'] = ['mpi4py>=1.2.2']

def config(prefix, dry_run=False):
    log.info('PETSc: configure')
    options = [
        '--prefix=' + prefix,
        'PETSC_ARCH='+os.environ['PETSC_ARCH'],
        '--with-shared-libraries=1',
        '--with-debugging=0',
        '--with-c2html=0', # not needed
        ]
    if '--with-fc=0' in CONFIGURE_OPTIONS:
        options.append('--with-sowing=0')
    if '--with-mpi=0' not in CONFIGURE_OPTIONS:
        try:
            import mpi4py
            conf = mpi4py.get_config()
            mpicc  = conf.get('mpicc')
            mpicxx = conf.get('mpicxx')
            mpif90 = conf.get('mpif90')
        except (ImportError, AttributeError):
            mpicc  = os.environ.get('MPICC')  or find_executable('mpicc')
            mpicxx = os.environ.get('MPICXX') or find_executable('mpicxx')
            mpif90 = os.environ.get('MPIF90') or find_executable('mpif90')
        if mpicc:
            options.append('--with-cc='+mpicc)
            if '--with-cxx=0' not in CONFIGURE_OPTIONS:
                if mpicxx:
                    options.append('--with-cxx='+mpicxx)
                else:
                    options.append('--with-cxx=0')
            if '--with-fc=0' not in CONFIGURE_OPTIONS:
                if mpif90:
                    options.append('--with-fc='+mpif90)
                else:
                    options.append('--with-fc=0')
                    options.append('--with-sowing=0')
        else:
            options.append('--with-mpi=0')
    options.extend(CONFIGURE_OPTIONS)
    #
    log.info('configure options:')
    for opt in options:
        log.info(' '*4 + opt)
    # Run PETSc configure
    if dry_run: return
    use_config_py = False
    if use_config_py:
        import configure
        configure.petsc_configure(options)
        import logger
        logger.Logger.defaultLog = None
    else:
        python = sys.executable
        command = [python, './configure'] + options
        status = os.system(" ".join(command))
        if status != 0: raise RuntimeError(status)

def build(dry_run=False):
    log.info('PETSc: build')
    # Run PETSc build
    if dry_run: return
    use_builder_py = False
    if use_builder_py:
        import builder
        builder.PETScMaker().run()
        import logger
        logger.Logger.defaultLog = None
    else:
        make = find_executable('make')
        command = [make, 'all']
        status = os.system(" ".join(command))
        if status != 0: raise RuntimeError(status)

def install(dry_run=False):
    log.info('PETSc: install')
    # Run PETSc installer
    if dry_run: return
    use_install_py = False
    if use_install_py:
        import install
        install.Installer().run()
        import logger
        logger.Logger.defaultLog = None
    else:
        make = find_executable('make')
        command = [make, 'install']
        status = os.system(" ".join(command))
        if status != 0: raise RuntimeError(status)

class context(object):
    def __init__(self):
        self.sys_argv = sys.argv[:]
        self.wdir = os.getcwd()
    def enter(self):
        del sys.argv[1:]
        pdir = os.environ['PETSC_DIR']
        os.chdir(pdir)
        return self
    def exit(self):
        sys.argv[:] = self.sys_argv
        os.chdir(self.wdir)

class cmd_install(_install):

    def initialize_options(self):
        _install.initialize_options(self)
        self.optimize = 1

    def finalize_options(self):
        _install.finalize_options(self)
        self.install_lib = self.install_platlib
        self.install_libbase = self.install_lib

    def run(self):
        root_dir = os.path.abspath(self.install_lib)
        prefix = os.path.join(root_dir, 'petsc')
        #
        ctx = context().enter()
        try:
            config(prefix, self.dry_run)
            build(self.dry_run)
            install(self.dry_run)
        finally:
            ctx.exit()
        #
        self.outputs = []
        for dirpath, _, filenames in os.walk(prefix):
            for fn in filenames:
                self.outputs.append(os.path.join(dirpath, fn))
        #
        _install.run(self)

    def get_outputs(self):
        outputs = getattr(self, 'outputs', [])
        outputs += _install.get_outputs(self)
        return outputs

def version():
    import re
    version_re = {
        'major'  : re.compile(r"#define\s+PETSC_VERSION_MAJOR\s+(\d+)"),
        'minor'  : re.compile(r"#define\s+PETSC_VERSION_MINOR\s+(\d+)"),
        'micro'  : re.compile(r"#define\s+PETSC_VERSION_SUBMINOR\s+(\d+)"),
        'release': re.compile(r"#define\s+PETSC_VERSION_RELEASE\s+([-]*\d+)"),
        }
    petscversion_h = os.path.join('include','petscversion.h')
    data = open(petscversion_h, 'r').read()
    major = int(version_re['major'].search(data).groups()[0])
    minor = int(version_re['minor'].search(data).groups()[0])
    micro = int(version_re['micro'].search(data).groups()[0])
    release = int(version_re['release'].search(data).groups()[0])
    if release > 0 :
        v = "%d.%d.%d" % (major, minor, micro)
    else:
        v = "%d.%d.0.dev%d" % (major, minor+1, 0)
    return v

def tarball():
    VERSION = version()
    if '.dev' in VERSION: return None
    return ('http://ftp.mcs.anl.gov/pub/petsc/release-snapshots//'
            'petsc-%s.tar.gz#egg=petsc-%s' % (VERSION, VERSION))

description = __doc__.split('\n')[1:-1]; del description[1:3]
classifiers = """
Development Status :: 5 - Production/Stable
Intended Audience :: Developers
Intended Audience :: Science/Research
License :: OSI Approved :: BSD License
Operating System :: POSIX
Programming Language :: C
Programming Language :: C++
Programming Language :: Fortran
Programming Language :: Python
Topic :: Scientific/Engineering
Topic :: Software Development :: Libraries
"""

if 'bdist_wheel' in sys.argv:
    sys.stderr.write("petsc: this package cannot be built as a wheel\n")
    sys.exit(1)

bootstrap()
setup(name='petsc',
      version=version(),
      description=description.pop(0),
      long_description='\n'.join(description),
      classifiers= classifiers.split('\n')[1:-1],
      keywords = ['PETSc', 'MPI'],
      platforms=['POSIX'],
      license='BSD',

      url='https://petsc.org/',
      download_url=tarball(),

      author='PETSc Team',
      author_email='petsc-maint@mcs.anl.gov',
      maintainer='Lisandro Dalcin',
      maintainer_email='dalcinl@gmail.com',

      packages = ['petsc'],
      package_dir = {'petsc': 'config/pypi'},
      cmdclass={'install': cmd_install},
      **metadata)