1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
|
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html>
<head> <link rel="canonical" href="http://www.mcs.anl.gov/petsc/petsc-current/docs/changes/21.html" />
<meta http-equiv="content-type" content="text/html;charset=utf-8">
<title>Documentation: Changes: 2.1.0</title>
</head>
<body bgcolor="#ffffff">
<div id="version" align=right><b>petsc-3.4.2 2013-07-02</b></div>
<h1>Documentation: Changes: 2.1.0</h1>
<style type="text/css">
h2 {
color: red;
}
h4 {
font-weight: bold;
text-decoration: underline;
}
</style>
<div id="main">
<div align="center">
<h2><a name="CHANGES">CHANGES</a> in PETSc 2.1.0 (see new <a href="#Features">features</a>)</h2>
</div>
<h4>General:</h4>
<ul>
<li>
Simpler interface for structured grids, see
src/snes/examples/tutorials/ex5.c
</li>
<li>
"System routines" including PLog..., Options..., Viewer...,
Draw...., FList...,OList... now all begin with the string Petsc. For
example, PetscOptionsGetInt() and PetscLogBegin().
</li>
<li>
The calling sequence for PetscMalloc() was changed to return and error
code and deliver the pointer as a new final argument. Due to this
change, the macros CHKPTRA() and CHKPTRQ() were dropped.
</li>
</ul>
<h4>AO (Application Orderings):</h4>
<h4>TS (Timestepping Solvers):</h4>
<h4>SNES (Nonlinear Solvers):</h4>
<h4>SLES (Linear Solvers):</h4>
<h4>KSP (Krylov Subspace Methods):</h4>
<h4>PC (Preconditioners):</h4>
<h4>MAT (Matrices):</h4>
<ul>
<li>
When using MatCreate(), you must follow with a MatSetType() or
MatSetFromOptions() before using the matrix.
</li>
<li>
Changed <code>int
MatShellSetOperation(Mat,MatOperation,void*);</code> to <code>int
MatShellSetOperation(Mat,MatOperation,void(*)());</code>
</li>
<li>
Changed <code>int
MatShellGetOperation(Mat,MatOperation,void**);</code> to <code>int
MatShellGetOperation(Mat,MatOperation,void(**)());</code>
</li>
<li>Changed IncompleteCholesky to ICC</li>
</ul>
<h4>DA (Distributed Arrays):</h4>
<ul>
<li>Changed the DAMG routines to DMMG routines.</li>
<li>
DAGetColoring() now has new second argument that takes either
IS_COLORING_GLOBAL or IS_COLOR_GLOBAL and a new third argument that
takes the matrix type of either MATMPIAIJ or MATMPIBAIJ.
</li>
</ul>
<h4>VEC (Vectors):</h4>
<ul>
<li>
Changed <code>int VecSetOperation(Vec,VecOperation,void*);</code> to
<code>int VecSetOperation(Vec,VecOperation,void(*)());</code>
</li>
</ul>
<h4>IS (Index Sets):</h4>
<h4>General:</h4>
<h4>Draw (Graphics):</h4>
<h4>Viewers:</h4>
<h4>System:</h4>
<h4>Error Handling:</h4>
<ul>
<li>
CHKERRA() is now obselete; use CHKERRQ() instead. Changed the calling
sequence of SETERRQ() to eliminate the second input parameter.
</li>
</ul>
<h4>Event Logging:</h4>
<h4>Fortran Interface:</h4>
<div align="center">
<h2>New <a name="Features">features</a> in PETSc 2.1.0 (see <a href="#CHANGES">changes</a> above)</h2>
</div>
<h4>General:</h4>
<ul>
<li>Simpler interface for structured grids, see src/snes/examples/tutorials/ex5.c</li>
<li>
Complete infrastructure for parallel multigrid for linear and
nonlinear problems on structured grids. See
src/snes/examples/tutorials/ex19.c
</li>
<li>Added manual pages for PETSc objects, enums etc.</li>
<li>
Added html version of all source code and examples, accessable from
docs/index.html and the manual pages.
</li>
</ul>
<h4>AO (Application Orderings):</h4>
<h4>TS (Timestepping Solvers):</h4>
<h4>SNES (Nonlinear Solvers):</h4>
<h4>SLES (Linear Solvers):</h4>
<h4>KSP (Krylov Subspace Methods):</h4>
<ul>
<li>
Added support for "diagonal scaling" of preconditioned
system as required by most ODE integrators via
PCDiagonalScaleSet().
</li>
</ul>
<h4>PC (Preconditioners):</h4>
<h4>MAT (Matrices):</h4>
<ul>
<li>
Added the Henry Tufo/Paul Fischer libtfs scalable parallel direct
solver for MPIAIJ matrices.
</li>
<li>Added routine MatFDColoringSetRecompute().</li>
</ul>
<h4>DA (Distributed Arrays):</h4>
<ul>
<li>
Added DAVecGetArray() to access the multidimensional arrays directly in
the global parallel indexing. See src/snes/examples/tutorials/ex5.c and
ex19.c
</li>
<li>
Add DAGetLocalVector()/DARestoreLocalVector() for inexpensive access
to local work vectors.
</li>
</ul>
<h4>VEC (Vectors):</h4>
<ul>
<li>Added DMComposite routines to help with PDE optimization and multicomponent PDEs.</li>
</ul>
<h4>IS (Index Sets):</h4>
<h4>PF:</h4>
<h4>Draw (Graphics):</h4>
<h4>Viewers:</h4>
<h4>System:</h4>
<h4>Error Handling:</h4>
<h4>Event Logging:</h4>
<h4>Fortran Interface:</h4>
</div>
</body>
</html>
|
