1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178
|
<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0" /><meta name="generator" content="Docutils 0.17.1: http://docutils.sourceforge.net/" />
<title>Installation — PETSc for Python 3.18.5 documentation</title>
<link rel="stylesheet" type="text/css" href="_static/pygments.css" />
<link rel="stylesheet" type="text/css" href="_static/classic.css" />
<script data-url_root="./" id="documentation_options" src="_static/documentation_options.js"></script>
<script src="_static/jquery.js"></script>
<script src="_static/underscore.js"></script>
<script src="_static/_sphinx_javascript_frameworks_compat.js"></script>
<script src="_static/doctools.js"></script>
<script src="_static/sphinx_highlight.js"></script>
<link rel="index" title="Index" href="genindex.html" />
<link rel="search" title="Search" href="search.html" />
<link rel="next" title="Tutorial" href="tutorial.html" />
<link rel="prev" title="Overview" href="overview.html" />
</head><body>
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
<li class="right" style="margin-right: 10px">
<a href="genindex.html" title="General Index"
accesskey="I">index</a></li>
<li class="right" >
<a href="tutorial.html" title="Tutorial"
accesskey="N">next</a> |</li>
<li class="right" >
<a href="overview.html" title="Overview"
accesskey="P">previous</a> |</li>
<li class="nav-item nav-item-0"><a href="index.html">PETSc for Python 3.18.5 documentation</a> »</li>
<li class="nav-item nav-item-this"><a href="">Installation</a></li>
</ul>
</div>
<div class="document">
<div class="documentwrapper">
<div class="bodywrapper">
<div class="body" role="main">
<section id="installation">
<h1>Installation<a class="headerlink" href="#installation" title="Permalink to this heading">¶</a></h1>
<section id="using-pip">
<span id="petsc4py-install"></span><h2>Using <strong>pip</strong><a class="headerlink" href="#using-pip" title="Permalink to this heading">¶</a></h2>
<p>You can use <strong class="program">pip</strong> to install <code class="xref py py-mod docutils literal notranslate"><span class="pre">petsc4py</span></code> and its
dependencies (<code class="xref py py-mod docutils literal notranslate"><span class="pre">mpi4py</span></code> is optional but highly recommended):</p>
<div class="highlight-default notranslate"><div class="highlight"><pre><span></span>$ python -m pip install [--user] numpy mpi4py (or pip install [--user] numpy mpi4py)
$ python -m pip install [--user] petsc petsc4py (or pip install [--user] petsc petsc4py)
</pre></div>
</div>
</section>
<section id="using-setuptools">
<h2>Using <strong>setuptools</strong><a class="headerlink" href="#using-setuptools" title="Permalink to this heading">¶</a></h2>
<p>You can also install dependencies manually and then invoke setuptools
from the <cite>petsc4py</cite> source directory:</p>
<blockquote>
<div><p>$ python setup.py build
$ python setup.py install</p>
</div></blockquote>
<p>You may use the <cite>–install-lib</cite> argument to the <cite>install</cite> command to alter the
<cite>site-packages</cite> directory where the package is to be installed.</p>
<p>If you are cross-compiling, and the <cite>numpy</cite> module cannot be loaded on your
build host, then before invoking <cite>setup.py</cite>, set <cite>NUMPY_INCLUDE</cite> environment
variable to the path that would be returned by <cite>import numpy;
numpy.get_include()</cite>:</p>
<blockquote>
<div><p>$ export NUMPY_INCLUDE=/usr/lib/pythonX/site-packages/numpy/core/include</p>
</div></blockquote>
</section>
<section id="from-petsc-source">
<h2>From PETSc source<a class="headerlink" href="#from-petsc-source" title="Permalink to this heading">¶</a></h2>
<p>If you already have downloaded PETSc source and have installed the dependencies
of <cite>petsc4py</cite>, then to build the <cite>petsc4py</cite> module along with PETSc, add the
<cite>–with-petsc4py=1</cite> argument to the configure command when building PETSc:</p>
<blockquote>
<div><p>$ ./configure –with-petsc4py=1
$ make
$ make install</p>
</div></blockquote>
<p>This will install PETSc and the <cite>petsc4py</cite> module into the PETSc directory
under the prefix specified to the PETSc configure command.</p>
<p>If you wish to make the module importable without having to set the
<cite>PYTHONPATH</cite> environment variable, you may add a shortcut to the system-wide
<cite>site-packages</cite> directory creating a special <cite>.pth</cite> file with exactly one line
of Python code. This can be done by the following command, where the
system-wide path is assumed to be <cite>/usr/lib/pythonX/site-packages</cite> (replace <cite>X</cite>
with your python version):</p>
<blockquote>
<div><dl class="simple">
<dt>$ echo </dt><dd><p>“import sys, os;” “p = os.getenv(‘PETSC_DIR’);” “a = os.getenv(‘PETSC_ARCH’) or ‘’;” “p = p and os.path.join(p, a, ‘lib’);” “p and (p in sys.path or sys.path.append(p))” > /usr/lib/pythonX/site-packages/petsc4py.pth</p>
</dd>
</dl>
</div></blockquote>
<p>If you are cross-compiling, and <cite>numpy</cite> cannot be loaded on your build host,
then pass <cite>–have-numpy=1 –with-numpy-include=PATH</cite>, where <cite>PATH</cite> is the path
that would be returned by <cite>import numpy; print(numpy.get_include())</cite>. This will
suppress autodetection of the include path on the build host.</p>
</section>
</section>
<div class="clearer"></div>
</div>
</div>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper">
<div>
<h3><a href="index.html">Table of Contents</a></h3>
<ul>
<li><a class="reference internal" href="#">Installation</a><ul>
<li><a class="reference internal" href="#using-pip">Using <strong>pip</strong></a></li>
<li><a class="reference internal" href="#using-setuptools">Using <strong>setuptools</strong></a></li>
<li><a class="reference internal" href="#from-petsc-source">From PETSc source</a></li>
</ul>
</li>
</ul>
</div>
<div>
<h4>Previous topic</h4>
<p class="topless"><a href="overview.html"
title="previous chapter">Overview</a></p>
</div>
<div>
<h4>Next topic</h4>
<p class="topless"><a href="tutorial.html"
title="next chapter">Tutorial</a></p>
</div>
<div role="note" aria-label="source link">
<h3>This Page</h3>
<ul class="this-page-menu">
<li><a href="_sources/install.rst.txt"
rel="nofollow">Show Source</a></li>
</ul>
</div>
<div id="searchbox" style="display: none" role="search">
<h3 id="searchlabel">Quick search</h3>
<div class="searchformwrapper">
<form class="search" action="search.html" method="get">
<input type="text" name="q" aria-labelledby="searchlabel" autocomplete="off" autocorrect="off" autocapitalize="off" spellcheck="false"/>
<input type="submit" value="Go" />
</form>
</div>
</div>
<script>document.getElementById('searchbox').style.display = "block"</script>
</div>
</div>
<div class="clearer"></div>
</div>
<div class="related" role="navigation" aria-label="related navigation">
<h3>Navigation</h3>
<ul>
<li class="right" style="margin-right: 10px">
<a href="genindex.html" title="General Index"
>index</a></li>
<li class="right" >
<a href="tutorial.html" title="Tutorial"
>next</a> |</li>
<li class="right" >
<a href="overview.html" title="Overview"
>previous</a> |</li>
<li class="nav-item nav-item-0"><a href="index.html">PETSc for Python 3.18.5 documentation</a> »</li>
<li class="nav-item nav-item-this"><a href="">Installation</a></li>
</ul>
</div>
<div class="footer" role="contentinfo">
© Copyright 2021, Lisandro Dalcin.
Created using <a href="https://www.sphinx-doc.org/">Sphinx</a> 5.3.0.
</div>
</body>
</html>
|