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REQUIREMENTS
------------
- 64bit processors
- cmake >= 3.7
- gcc >= 4.6
- gfortran (or g77 or f77) for release 2.3 source code
- perl >= 5.5.3 for ps_scan.pl
File::Slurp
Optional:
- pcre2 (or pcre)
- GD*
- libpng
- libjpeg
- zlib
- libharu* (hpdf)
* copy of the source code is provided and could be used during build, if requested.
INSTALLATION
------------
In order to compile the programs, type:
BUILD:
git clone https://github.com/sib-swiss/pftools3.git
cd pftools3
mkdir build
cd build/
cmake ..
OPTIONS:
- Build without affinity (old machines)
cmake -DUSE_AFFINITY=OFF ..
- Build static binaries:
cmake -DSTANDALONE=ON ..
- Build a version using 32bits integers to represent profile matrix values
instead of default 16bits (less problems with low/negative cutoff values,
might be slower & use more memory):
cmake -DUSE_32BIT_INTEGER=ON ..
- Change installation prefix:
cmake -DCMAKE_INSTALL_PREFIX:PATH=<INSTALL PATH> ..
- Compile C only code (version 3 only):
cmake -DC_ONLY=ON ..
- Compile with graphical support for pfcalibrateV3 (highly optional):
cmake -DUSE_GRAPHICS=ON -DUSE_PDF=ON ..
- Compile with old PCRE:
cmake -DUSE_PCRE2=OFF -DUSE_PCRE=ON ..
- Compile without regular expression support:
cmake -DUSE_PCRE2=OFF ..
...
example:
cmake -DC_ONLY=ON -DUSE_32BIT_INTEGER=ON -DUSE_PCRE2=OFF ..
COMPILE:
make
This will create the binaries. To install the
binaries and the corresponding manual pages type:
INSTALL (see above to change install path):
make install
CHECK/TEST:
make test
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