1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
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26
27
28
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38
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# This matrix was produced by "pam" Version 1.0.6 [28-Jul-93]
#
# PAM 400 substitution matrix, scale = ln(2)/5 = 0.138629
#
# Expected score = -0.521, Entropy = 0.139 bits
#
# Lowest score = -8, Highest score = 26
#
#
# mean= -0.4583 , stdev= 3.0788
#
A B C D E F G H I K L M N P Q R S T V W Y Z ..
1.0 1.0 -2.0 1.0 1.0 -3.0 1.0 -1.0 0.0 -1.0 -2.0 -1.0 0.0 1.0 0.0 -1.0 1.0 1.0 0.0 -6.0 -3.0 0.0 A
2.0 -4.0 2.0 2.0 -4.0 1.0 1.0 -2.0 1.0 -3.0 -2.0 2.0 0.0 2.0 0.0 1.0 0.0 -1.0 -5.0 -3.0 2.0 B
17.0 -5.0 -5.0 -4.0 -3.0 -3.0 -2.0 -5.0 -6.0 -5.0 -3.0 -2.0 -5.0 -4.0 0.0 -2.0 -2.0 -8.0 1.0 -5.0 C
3.0 3.0 -5.0 1.0 1.0 -2.0 1.0 -3.0 -2.0 2.0 0.0 2.0 0.0 1.0 0.0 -2.0 -7.0 -4.0 2.0 D
3.0 -5.0 1.0 1.0 -2.0 1.0 -3.0 -2.0 2.0 0.0 2.0 0.0 0.0 0.0 -1.0 -7.0 -4.0 3.0 E
11.0 -5.0 -2.0 2.0 -5.0 3.0 1.0 -3.0 -4.0 -4.0 -4.0 -3.0 -3.0 0.0 2.0 10.0 -5.0 F
4.0 -1.0 -2.0 -1.0 -3.0 -2.0 1.0 0.0 0.0 -2.0 1.0 1.0 -1.0 -7.0 -5.0 0.0 G
5.0 -2.0 1.0 -2.0 -1.0 1.0 0.0 3.0 2.0 0.0 -1.0 -2.0 -2.0 0.0 2.0 H
4.0 -2.0 3.0 2.0 -1.0 -1.0 -2.0 -2.0 -1.0 0.0 3.0 -5.0 0.0 -2.0 I
4.0 -2.0 0.0 1.0 0.0 1.0 4.0 0.0 0.0 -2.0 -3.0 -4.0 1.0 K
7.0 4.0 -3.0 -2.0 -2.0 -3.0 -2.0 -1.0 3.0 -2.0 0.0 -2.0 L
5.0 -1.0 -1.0 -1.0 0.0 -1.0 0.0 2.0 -4.0 -1.0 -1.0 M
1.0 0.0 1.0 1.0 1.0 0.0 -1.0 -4.0 -3.0 1.0 N
5.0 0.0 0.0 1.0 1.0 -1.0 -6.0 -5.0 0.0 P
3.0 1.0 0.0 0.0 -1.0 -5.0 -4.0 2.0 Q
5.0 0.0 0.0 -2.0 3.0 -4.0 1.0 R
1.0 1.0 -1.0 -3.0 -3.0 0.0 S
1.0 0.0 -5.0 -3.0 0.0 T
4.0 -6.0 -2.0 -1.0 V
26.0 1.0 -6.0 W
13.0 -4.0 Y
3.0 Z
|
