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MACRO(TEST_PFSEARCHV3 subdir name prf seqdb options output_format output_filename)
IF (NOT EXISTS ${TESTS_DIRECTORY}/${subdir}/)
FILE(MAKE_DIRECTORY ${TESTS_DIRECTORY}/${subdir}/)
ENDIF(NOT EXISTS ${TESTS_DIRECTORY}/${subdir}/)
ADD_TEST(NAME pfsearchV3_${subdir}_${name}
WORKING_DIRECTORY "${TESTS_DIRECTORY}"
COMMAND ${CMAKE_COMMAND}
-DEXECUTABLE3=$<TARGET_FILE:pfsearchV3>
-DTESTS_DIRECTORY=${TESTS_DIRECTORY}
-DRESULTS_DIR=${TESTS_DATA_DIR}/cmake/Truth
-DPRF=${TESTS_DATA_DIR}/cmake/${subdir}/${prf}
-DSEQDB=${TESTS_DATA_DIR}/cmake/${subdir}/${seqdb}
-DOUTPUT_FORMAT=${output_format}
-DOPTIONS=${options}
-DOUT_FILE=${subdir}/${output_filename}.test
-P ${PROJECT_SOURCE_DIR}/cmake/tests/run_pfsearch_test.cmake
)
ENDMACRO(TEST_PFSEARCHV3)
MACRO(COMPARE_PFSEARCH subdir name prf seqdb opt3 opt)
IF (NOT EXISTS ${TESTS_DIRECTORY}/${subdir}/)
FILE(MAKE_DIRECTORY ${TESTS_DIRECTORY}/${subdir}/)
ENDIF(NOT EXISTS ${TESTS_DIRECTORY}/${subdir}/)
ADD_TEST(NAME compare_${subdir}_${name}
WORKING_DIRECTORY "${TESTS_DIRECTORY}"
COMMAND ${CMAKE_COMMAND}
-DEXECUTABLE3=$<TARGET_FILE:pfsearchV3>
-DEXECUTABLE=$<TARGET_FILE:pfsearch>
-DTESTS_DIRECTORY=${TESTS_DIRECTORY}
-DRESULTS_DIR=${TESTS_DATA_DIR}/cmake/Truth
-DPRF=${TESTS_DATA_DIR}/cmake/${subdir}/${prf}
-DSEQDB=${TESTS_DATA_DIR}/cmake/${subdir}/${seqdb}
-DOPTIONS3=${opt3}
-DOUT_FILE=${subdir}/${name}
-P ${PROJECT_SOURCE_DIR}/cmake/tests/cmp_pfsearchX.cmake
)
ENDMACRO(COMPARE_PFSEARCH)
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