File: benchmark.pl

package info (click to toggle)
pgpointcloud 1.2.5-3
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 4,892 kB
  • sloc: sql: 40,767; ansic: 11,045; xml: 935; makefile: 297; cpp: 282; perl: 248; python: 178; sh: 92
file content (318 lines) | stat: -rwxr-xr-x 8,953 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
#!/usr/bin/env perl

# Example usage:
# PGDATABASE=db1 ./benchmark.pl raw20h64_1000_p3_uncompressed_main
#
# NOTE: OS caches behave in a weird way so your timings might be
#       confusing due to some data being loaded in there in an
#       arbitrary way. It is recommended to invoke this script
#       once for each table and flush system caches in between.
#       There is no standard way to clean caches;
#       on linux (tested on 3.13), flushing it is done
#       by first calling sync(1) and then writing the number 3
#       into /proc/sys/vm/drop_caches, see
#       https://www.kernel.org/doc/Documentation/sysctl/vm.txt
#       sudo sync && sudo sh -c 'echo 3 >/proc/sys/vm/drop_caches'
#

use strict;

sub usage {
  my $s = <<"EOF";
Usage: $0 [<options>] <tabname>[:<colname>] ...
Options:
  --query <query>  A query to run. Can be specified multiple times.
                   The `:c' string will be replaced with the column name.
                   A default set of queries are run if none are provided.
  --iterate <n>    Number of times to run each query, defaults to 1.
                   Use 0 to skip running queries (still prints dataset info).
EOF
  return $s;
}

my @QUERIES = ();
my $iterations = 1; # this one might be unneeded


# Parse commandline arguments
for (my $i=0; $i<@ARGV; ++$i) {
  if ( $ARGV[$i] =~ /^--/ ) {
    my $switch = splice @ARGV, $i, 1;
    if ( $switch eq '--query' ) {
      my $query = splice @ARGV, $i, 1;
      --$i; # rewind as argv shrinked
      push @QUERIES, $query;
    } elsif ( $switch eq '--iterate' ) {
      $iterations = splice @ARGV, $i, 1;
      --$i; # rewind as argv shrinked
    } else {
      die "Unrecognized option $switch\n";
    }
  }
}

@ARGV || die usage;

my $PSQL = "psql";
my $PSQL_OPTS = '-tXA';

sub query {
  my $sql = shift;
  open OUTPUT, "-|", ${PSQL}, ${PSQL_OPTS}, '-c', ${sql} || die "Cannot run ${PSQL}";
  my @out = <OUTPUT>;
  close OUTPUT;
  my $ret = join '', @out;
  chop $ret;
  return $ret;
}

# checkTimes <sql> <iterations>
# Check min/max/avg times of running <sql> over <iterations> iterations
sub checkTimes {
  my $sql = shift;
  my $iterations = shift;
  my $min = 1e100; # TODO: use highest number
  my $max = 0;
  my $sum = 0;
  my $iomin = $min;
  my $iomax = $max;
  my $iosum = 0;
  my $i;

  $sql = "explain (analyze,buffers) $sql";
  for (my $i=0; $i<$iterations; $i++)
  {
    my $out = query($sql);
    #print $out;

    # Parse "Total runtime"
    $out =~ /Total runtime: ([0-9\.]*) ms/m
      || die "Could not extract runtime info, output is:\n$out\n";
    my $time = 0+$1;
    $min = $time if $time < $min;
    $max = $time if $time > $max;
    $sum += $time;

    # parse "I/O Timings"
    if ( $out =~ /I\/O Timings: read=([0-9\.]*)/m )
    {
      $time = 0+$1;
      $iomin = $time if $time < $iomin;
      $iomax = $time if $time > $iomax;
      $iosum += $time;
    }

  }
  my $avg = $sum / $iterations;

  if ( $iosum ) {
    my $ioavg = $iosum / $iterations;
    my $p = ($iomin/$min)*100;
    $min = sprintf("%.2f + %.2f = %.2f (%d%% IO, %d%% CPU)",
      $iomin, ($min-$iomin), $min, $p, (100-$p));
    $p = ($iomax/$max)*100;
    $max = sprintf("%.2f + %.2f = %.2f (%d%% IO, %d%% CPU)",
      $iomax, ($max-$iomax), $max, $p, (100-$p));
    $p = ($ioavg/$avg)*100;
    $avg = sprintf("%.2f + %.2f = %.2f (%d%% IO, %d%% CPU)",
      $ioavg, ($avg-$ioavg), $avg, $p, (100-$p));
  }

  return ($min,$max,$avg);
}

# reportTimes @times, iterations
# Check min/max/avg times of running <sql> over <iterations> iterations
sub reportTimes {
  my $label = shift;
  my $sql = shift;
  my $iterations = shift;

  my @time = checkTimes($sql, $iterations);

  my $s = $label . ': ';
  if ( $iterations > 1 ) {
    my $pad = $s; $pad =~ s/./ /g;
    #$s .= join("\n${pad}", @time);
    $s .= $time[0] . " -- min\n";
    $s .= $pad   . $time[1] . " -- max\n";
    $s .= $pad   . $time[2] . " -- avg";
  } else {
    $s .= $time[0];
  }
  return $s;
}

# Default queries
if ( ! @QUERIES ) {
  push @QUERIES, (
    # Inline scan (never need to get to offline storage)
    'count(:c)',
    # Header scan (sliced read, if not pgsql-compressed)
    'PC_Envelope(:c)',
    # Decompression (full read, if pointcloud-compressed)
    'PC_Uncompress(:c)'
    # Full points scan (involves uncompression)
    ,'PC_Explode(:c)'
    # Conversion to JSON (needed?)
    #,'PC_AsText(:c)'
   );
}

# General checks
my $info = query("select version()");
print "$info\n";
$info = query("show block_size");
print "Block size: $info\n";
$info = query("show track_io_timing");
if ( $info ne 'on' ) {
  print STDERR "WARNING: it is recommended to set track_io_timing to on\n"
  # TODO: try to enable it (would need using a single session for all queries)
}

foreach $a (@ARGV) {
  my $tn="${a}";
  my $col="pa";
  if ( $tn =~ /(.*):(.*)/ ) {
    $col = $2;
    $tn = $1;
  }
  print "\n[$tn:$col]\n";

  $info = query(<<"EOF"
select pg_size_pretty(pg_relation_size('${tn}')), -- main
       -- toasts
       pg_size_pretty(pg_table_size('${tn}')-pg_relation_size('${tn}')),
       -- indexes
       pg_size_pretty(pg_total_relation_size('${tn}')-pg_table_size('${tn}')),
       -- total
       pg_size_pretty(pg_total_relation_size('${tn}'))
EOF
  );
  my @info = split '\|', $info;

  print ' Relation size: ' . $info[0] . ' + ' . $info[1]
      . ' + ' . $info[2] . ' = ' . $info[3] . " (M+T+I)\n";

  $info = query(<<"EOF"
SELECT CASE WHEN attstorage = 'm' THEN 'main'
            WHEN attstorage = 'e' THEN 'external'
            WHEN attstorage = 'p' THEN 'plain'
            WHEN attstorage = 'x' THEN 'extended'
            ELSE attstorage::text
       END
FROM pg_attribute
WHERE attrelid = '${tn}'::regclass::oid
  AND attname = '${col}'
EOF
  );
  print ' Patch column storage: ' . $info . "\n";

  my $dims = query(<<"EOF"
with format as (
 select f."schema" s from pointcloud_formats f, pointcloud_columns c
where "table"='${tn}' and "column" = '${col}'
 and f.pcid = c.pcid
), meta0 as (
  select s, (regexp_matches(s, 'pc="([^"]*)"'))[1] nsp
  from format
), meta as (
  select s, ARRAY[ARRAY['pc',nsp]] ns
  from meta0
), dims0 as (
  select unnest(xpath('//pc:dimension', s::xml, ns)) d
  from meta
), ordered as (
  select d from dims0, meta
  order by (xpath('//pc:position/text()', d, ns))[1]::text::int
), dims as (
--<pc:dimension xmlns:pc="http://pointcloud.org/schemas/PC/1.1">
--  <pc:position>13</pc:position>
--  <pc:size>8</pc:size>
--  <pc:name>GPSTime</pc:name>
--  <pc:interpretation>double</pc:interpretation>
--</pc:dimension>
  select
    (xpath('//pc:name/text()', d, ns))[1] || ':' ||
    replace((xpath('//pc:interpretation/text()', d, ns))[1]::text, '_t', '')
    d
  from ordered, meta
)
select array_to_string(array_agg(d),',') from dims
EOF
  );
  my @dims_interp = ();
  my @dims_name = ();
  foreach my $dim (split ',', $dims) {
    my ($name, $interp) = split(':', $dim);
    push @dims_name, $name;
    push @dims_interp, $interp;
  }
  print " Dims: " . join(',',@dims_interp) . "\n";

  $info = query(<<"EOF"
select count(*), -- 0
1, --min(pc_numpoints(\"${col}\")), -- 1
sum(pc_numpoints(\"${col}\")), -- 2
avg(pc_numpoints(\"${col}\")), -- 3
avg(pc_memsize(\"${col}\"))/avg(pc_numpoints(\"${col}\")), -- 4
avg(pc_memsize(\"${col}\")), -- 5
array_to_string(array_agg(distinct
  CASE WHEN PC_Compression(\"${col}\") = 0 THEN 'NONE'
       WHEN PC_Compression(\"${col}\") = 1 THEN 'DIMENSIONAL'
       WHEN PC_Compression(\"${col}\") = 2 THEN 'LAZPERF'
       ELSE                                     'UNKNOWN'
  END
), ','),
pg_size_pretty(sum(pg_column_size(\"${col}\")))  -- 7
from \"${tn}\"
EOF
  );

  @info = split '\|', $info;
  #print ' Info: ' . join(',', @info) . "\n";
  print ' Total patch column size: ' . $info[7] . "\n";
  print ' Patches: ' . $info[0] . ", points: " . $info[2] . "\n";
  printf "  Compression: %s\n", $info[6];
  printf "  Average patch size (bytes): %d\n", $info[5];
  printf "  Average points per patch: %d\n", $info[3];
  printf "  Average bytes per point: %.2f\n", $info[4];
#  print ' Points: ' . $info[4] . ' ('
#       . join('/', @info[1 .. 3])
#       . ' min/max/avg per patch'
#       . ")\n";


  #$info = query("select pg_size_pretty(pg_total_relation_size('${tn}'));\n");
  #print ' Total relation size: ' . $info . "\n";

  next if ! $iterations;

  # Speed tests here

  print " Timings ";
  if ( $iterations > 1 ) {
      print "(ms over ${iterations} iterations):\n";
  } else {
    print "(ms):\n";
  }

  for my $query ( @QUERIES )
  {
    my $sql = $query;
    $sql =~ s/:c/"${col}"/g;
    if ( $sql =~ /\s*SELECT/i ) {
      $sql =~ s/:t/"${tn}"/g;
    } else {
      $sql = "SELECT ${sql} FROM \"${tn}\"";
      # TODO: add where clause if requested
    }
    my $lbl = $sql;
    $lbl =~ s/.*SELECT *([a-zA-Z_]*).*/\1/i;
    $lbl = '  '.$lbl;
    #print "LBL: $lbl --- SQL: $sql";
    print reportTimes($lbl, $sql, $iterations) . "\n";
  }
}

print "\n";