File: test_abinit.py

package info (click to toggle)
phonopy 2.44.0-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 29,136 kB
  • sloc: python: 42,934; xml: 12,080; ansic: 3,227; cpp: 525; sh: 213; makefile: 20
file content (32 lines) | stat: -rw-r--r-- 991 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
"""Tests of Abinit calculator interface."""

import io
import pathlib

import numpy as np

from phonopy.interface.abinit import get_abinit_structure, read_abinit
from phonopy.interface.phonopy_yaml import read_cell_yaml
from phonopy.structure.cells import isclose

cwd = pathlib.Path(__file__).parent


def test_read_abinit():
    """Test of read_abinit."""
    cell = read_abinit(cwd / "NaCl-abinit.in")
    filename = cwd / "NaCl-abinit-pwscf.yaml"
    cell_ref = read_cell_yaml(filename)
    assert (np.abs(cell.cell - cell_ref.cell) < 1e-5).all()
    diff_pos = cell.scaled_positions - cell_ref.scaled_positions
    diff_pos -= np.rint(diff_pos)
    assert (np.abs(diff_pos) < 1e-5).all()
    for s, s_r in zip(cell.symbols, cell_ref.symbols):
        assert s == s_r


def test_get_abinit_structure():
    """Test get_abinit_structure."""
    cell_ref = read_abinit(cwd / "NaCl-abinit.in")
    cell = read_abinit(io.StringIO(get_abinit_structure(cell_ref)))
    isclose(cell_ref, cell)