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# Makefile, tests directory and samples by Catherine Letondal <letondal@pasteur.fr>
test: testdna testprot testdist testtree
testdna:
rm -f infile
ln -s dna.data infile
make testprog PROGRAM=dnapars
make testprog PROGRAM=dnaml
make testprog PROGRAM=dnadist
testprot:
rm -f infile
ln -s prot.data infile
make testprog PROGRAM=protpars
make testprog PROGRAM=protdist
testdist:
rm -f infile
ln -s distance.data infile
make testprog PROGRAM=neighbor
testtree:
rm -f treefile
ln -s tree.data treefile
echo 0 > params
echo l >> params
echo n >> params
echo y >> params
phylip drawtree < params > drawtree.out
phylip drawgram < params > drawgram.out
testprog:
echo 0 > params
echo y >> params
phylip ${PROGRAM} < params > ${PROGRAM}.out
clean:
rm -f infile *.out treefile outfile *~
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