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check_PROGRAMS= simf unittests
simf_SOURCES= simf.cxx
simf_CPPFLAGS= -std=c++17 -Wall -Wextra
simf_CXXFLAGS= -ggdb
unittests_SOURCES= \
$(top_srcdir)/src/esa.cxx \
$(top_srcdir)/src/esa.h \
$(top_srcdir)/src/evo_model.cxx \
$(top_srcdir)/src/evo_model.h \
$(top_srcdir)/src/process.cxx \
$(top_srcdir)/src/process.h \
$(top_srcdir)/src/sequence.cxx \
$(top_srcdir)/src/sequence.h \
catch.hpp \
Tmain.cxx \
Tprocess.cxx \
Tsequence.cxx
unittests_CPPFLAGS= -I$(top_srcdir)/src -I$(top_srcdir)/libs -std=c++17 -Wall -Wextra
unittests_CXXFLAGS= -ggdb
unittests_LDADD = \
$(top_builddir)/libs/libcompat.a \
$(top_builddir)/libs/libpfasta.a \
$(top_builddir)/libs/librevseqcmp.a \
$(top_builddir)/libs/libseqcmp.a
if ENABLE_X86_SIMD
unittests_LDADD+=\
$(top_builddir)/libs/librevseqcmp_avx2.a \
$(top_builddir)/libs/librevseqcmp_ssse3.a \
$(top_builddir)/libs/libseqcmp_avx2.a \
$(top_builddir)/libs/libseqcmp_sse2.a
if ENABLE_AVX512
unittests_LDADD+=$(top_builddir)/libs/libseqcmp_avx512.a
endif
endif
dist_noinst_DATA= simple.sh
.PHONY: format
format:
clang-format -i *.h *.cxx
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