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#ifndef DistCalc_h
#define DistCalc_h
typedef float dist_t;
const dist_t BIG_DIST = (dist_t) 1e29;
class DistFunc;
class DistCalc
{
public:
virtual void CalcDistRange(unsigned i, dist_t Dist[]) const = 0;
virtual unsigned GetCount() const = 0;
virtual unsigned GetId(unsigned i) const = 0;
virtual const char *GetName(unsigned i) const = 0;
};
class DistCalcDF : public DistCalc
{
public:
void Init(const DistFunc &DF);
virtual void CalcDistRange(unsigned i, dist_t Dist[]) const;
virtual unsigned GetCount() const;
virtual unsigned GetId(unsigned i) const;
virtual const char *GetName(unsigned i) const;
private:
const DistFunc *m_ptrDF;
};
class DistCalcMSA : public DistCalc
{
public:
void Init(const MSA &msa);
virtual void CalcDistRange(unsigned i, dist_t Dist[]) const;
virtual unsigned GetCount() const;
virtual unsigned GetId(unsigned i) const;
virtual const char *GetName(unsigned i) const;
private:
const MSA *m_ptrMSA;
};
#endif // DistCalc_h
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