File: getgdtree.cpp

package info (click to toggle)
pilercr 1.06%2Bdfsg-5
  • links: PTS, VCS
  • area: main
  • in suites: bookworm, forky, sid, trixie
  • size: 844 kB
  • sloc: cpp: 14,339; makefile: 67; sh: 36
file content (12 lines) | stat: -rwxr-xr-x 186 bytes parent folder | download | duplicates (2)
1
2
3
4
5
6
7
8
9
10
11
12
#include "multaln.h"

void GetGuideTree(const SeqVect &Seqs, Tree &GuideTree)
	{
	DistFunc DF;
	KmerDist(Seqs, DF);

	DistCalcDF DC;
	DC.Init(DF);

	UPGMA(DC, GuideTree);
	}