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|
---------------------
2001/12/18
Initial revision
Makefile
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/BinaryFileInputStream.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileInputStream.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppAWT.java
com/pixelmed/display/event/WindowCenterAndWidthChangable.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeListener.java
---------------------
2001/12/18
Initial revision
com/pixelmed/display/TextAnnotation.java
---------------------
2002/04/13
add default number of row and column tiles if not specified on command line
com/pixelmed/display/TestApp.java
---------------------
2002/04/13
add NOTES file
com/pixelmed/display/NOTES
---------------------
2002/04/13
tested with dicom and acrnema files from dctool.support
com/pixelmed/display/NOTES
---------------------
2002/04/13
add signed and inverted test to TestApp in same manner as DicomBrowser
com/pixelmed/display/TestApp.java
---------------------
2002/04/13
tests after signed/inverted in TestApp
com/pixelmed/display/NOTES
---------------------
2002/04/13
add dump of min/max
com/pixelmed/display/NOTES
com/pixelmed/display/SourceImage.java
---------------------
2002/04/21
created utils and network directories
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/SOPClass.java
com/pixelmed/network/TransferSyntax.java
com/pixelmed/network/VerificationSOPClass.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/HexDump.java
---------------------
2002/04/21
add IOException
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/21
created
com/pixelmed/network/Makefile
---------------------
2002/04/21
com/pixelmed/network/AssociationFactory.java
com/pixelmed/utils/Makefile
---------------------
2002/04/21
add network and tuils
Makefile
---------------------
2002/04/21
add rm core to clean
Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/network/Makefile
com/pixelmed/utils/Makefile
---------------------
2002/04/21
add AssociateRejectPDU
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/Makefile
---------------------
2002/04/22
add messages to RJ
com/pixelmed/network/AssociateRejectPDU.java
---------------------
2002/04/22
better PDU type description messages
com/pixelmed/network/AssociateRequestAcceptPDU.java
---------------------
2002/04/22
protocol version was wrong byte offset during parse in AC
com/pixelmed/network/AssociateRequestAcceptPDU.java
---------------------
2002/04/24
more work on associations, include A-ABORT
com/pixelmed/network/AbortPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/Makefile
---------------------
2002/04/24
com/pixelmed/network/Makefile
---------------------
2002/04/24
turn IOExceptions into A-P-ABORT indication
com/pixelmed/network/AbortPDU.java
com/pixelmed/network/Association.java
---------------------
2002/04/24
clean up messages
com/pixelmed/network/AbortPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/Association.java
---------------------
2002/04/24
rename AbortPDU to AAbortPDU
com/pixelmed/network/AAbortPDU.java
---------------------
2002/04/24
rename AbortPDU to AAbortPDU
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AbortPDU.java(DEAD)
com/pixelmed/network/Association.java
com/pixelmed/network/Makefile
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/24
handle release response
com/pixelmed/network/Association.java
---------------------
2002/04/24
parameterized constructor to allow for A-RELEASE-RQ or -RP
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/Association.java
---------------------
2002/04/24
handle release collisions
com/pixelmed/network/Association.java
---------------------
2002/04/24
com/pixelmed/network/AssociateRequestAcceptPDU.java
---------------------
2002/04/24
com/pixelmed/network/Association.java
com/pixelmed/network/Makefile
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/24
com/pixelmed/network/Association.java
com/pixelmed/network/PresentationDataValue.java
---------------------
2002/04/24
com/pixelmed/network/Association.java
com/pixelmed/network/Makefile
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/24
Add support for received data
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/24
add extractBytes
com/pixelmed/utils/ByteArray.java
---------------------
2002/04/24
com/pixelmed/network/Association.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/27
use System.arraycopy
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/utils/ByteArray.java
---------------------
2002/04/28
correct PDU type in toString()
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/28
correct .java to .class
com/pixelmed/network/Makefile
---------------------
2002/04/28
put it back without trailing extra spaces on SOP class experiment
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/04/28
use null not space in AffectedSOPClassUID padding
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/05/09
add support for implicit VR
com/pixelmed/dicom/BinaryFileInputStream.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomFileInputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2002/05/09
more VR test methods to ValueRepresentation.class
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2002/05/09
add support for implicit VR
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/TagFromName.java
---------------------
2002/05/14
com/pixelmed/display/Makefile
---------------------
2002/05/14
add multiframe and stack mode scrolling with middle mouse
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
---------------------
2002/05/19
add tag number to wrong value type exception message
com/pixelmed/dicom/Attribute.java
---------------------
2002/05/19
add OX to OB or OW based on Bits Allocated > 8 decision
com/pixelmed/dicom/AttributeList.java
---------------------
2002/05/24
factor out AssociationInitiator from Association
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/Makefile
---------------------
2002/05/24
Filter accepted and rejected transfer syntaxes and choose appropriate accepted one
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/05/24
Add detailed description of presentation context rejection
com/pixelmed/network/PresentationContext.java
---------------------
2002/05/26
Add information entity support to DicomDictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/Makefile
---------------------
2002/05/26
add database module
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/Makefile
com/pixelmed/database/NOTES
---------------------
2002/05/27
Add name to dictionary
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/InformationEntity.java
---------------------
2002/05/27
com/pixelmed/display/SourceImage.java
---------------------
2002/05/27
switch to returning byte[] for VR from attributes; also fix explicit OW choice when considering implicit
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2002/05/27
add dynamic extension (doesn't work with HSQL no ALTER statement); then add create tables from DICOM dictionary
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/05/27
put root information entity in constructor
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/05/27
add instance UIDs to dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2002/05/27
start working on object selection
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/05/27
insert rows if not already there
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/05/28
include filename at instance level
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/05/29
add newInstance to be sure driver static initializers register; add close(0 method and call from finalize()
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/06/14
add copyright notice
com/pixelmed/utils/ByteArray.java
---------------------
2002/06/14
add copyright notice
com/pixelmed/utils/ByteArray.java
---------------------
2002/06/14
add copyright and ident string
COPYRIGHT
Makefile
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/Makefile
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/BinaryFileInputStream.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileInputStream.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppAWT.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/event/WindowCenterAndWidthChangable.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeListener.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/Makefile
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/SOPClass.java
com/pixelmed/network/TransferSyntax.java
com/pixelmed/network/VerificationSOPClass.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/Makefile
---------------------
2002/06/20
don't use character types not present in 1.3
com/pixelmed/utils/HexDump.java
---------------------
2002/06/21
Add conversion to most favorable image type to accelerate on MacOSX
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2002/06/21
only apply most favorable conversion if MRJ detected
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/06/21
only apply most favorable conversion if MRJ detected
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/06/21
clean up most favorable conversion
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/05
Fix SOP Instance UIDs in testsrdir; add DicomImageViewer.java and experiment with JSplitPane; add resizing scaling, including measurements and interactive drawing
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/05
try rendering hints for drawImage scaling
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/06
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/06
dicom dictionary generated from dicom3tools
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2002/07/08
update database code for dicom3tools-derived dicom dictionary and improve string value handling in SQL statements
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2002/07/12
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/12
color space experiments
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/12
color space experiments
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/07/12
various different grayscale, mean and sd window choice experiments (now commented out)
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/TestApp.java
---------------------
2002/07/13
add attribute list browser to dicomdir browser
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/Makefile
---------------------
2002/07/13
add fudge factor for heading as well
com/pixelmed/dicom/AttributeListTableBrowser.java
---------------------
2002/07/14
separate out table model from browser, and allow model to be set later and fire table changed event
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/Makefile
---------------------
2002/07/14
work on initial and resizing issues
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/07/14
exclude private attributes
Makefile
com/pixelmed/dicom/AttributeListTableModel.java
---------------------
2002/07/15
no private tags in attribute table
com/pixelmed/dicom/AttributeListTableModel.java
---------------------
2002/07/15
dump tag in exception in sequence parsing
com/pixelmed/dicom/AttributeList.java
---------------------
2002/07/15
include file ID after all
com/pixelmed/dicom/DicomDirectoryBrowser.java
---------------------
2002/07/15
work around Philips bug with extraneous nested Item tag
com/pixelmed/dicom/AttributeList.java
---------------------
2002/08/03
sort attribute browser table, add a table model that looks in functional groups
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/03
add event for selecting frames, and use it to update frame attributes in attribute list browser for functional groups
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/event/SourceImageSelectionChangable.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeListener.java
---------------------
2002/08/03
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
---------------------
2002/08/03
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/03
work on float value problem
com/pixelmed/dicom/BinaryFileInputStream.java
---------------------
2002/08/04
resolve incorrect float double value problem
com/pixelmed/dicom/BinaryFileInputStream.java
---------------------
2002/08/04
add file dialog if no filename on command line
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/08/04
use event for first loading of attribute list browser
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
---------------------
2002/08/04
factor out loading image into multipanel and attribute browser from main line of GUI code
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
load button
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
remember last directory path for file dialog
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/08/04
work on wait cursor during load
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
exit on application frame window closing
com/pixelmed/display/ApplicationFrame.java
---------------------
2002/08/04
bilinear interpolation
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/08/04
add status bar
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
add status bar
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/event/StatusChangable.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/StatusChangeListener.java
---------------------
2002/08/04
add status bar
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
add status bar
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
status bar ... repaint code works on linux 1.4.0-b92
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
temporarily disable all tabbed panes except display controls
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
add getStringValues() methods ... probably do not handle sign quite correctly
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
---------------------
2002/08/04
remove borders
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/04
work on adding DICOMDIR stuff to DicomImageViewer (without breaking too much :()
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
---------------------
2002/08/05
work on adding DICOMDIR stuff to DicomImageViewer (without breaking too much :()
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/05
merged image file and dicomdir load
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/05
factor out load routine
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/05
make initial load use common image/directory load routines shared with button action listeners
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/05
return multiple values in attribute table model
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeListTableModel.java
---------------------
2002/08/05
implement view selection for DICOMDIR image records
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/08/05
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
---------------------
2002/08/07
add tree of attributes display
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/07
add attribute class for AT VR
com/pixelmed/dicom/AttributeTagAttribute.java
---------------------
2002/08/07
tidy up border (a bit)
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/07
make dictionary map creation methods protected so they can be (selectively) overridden
com/pixelmed/dicom/DicomDictionary.java
---------------------
2002/08/07
make dictionary map creation methods protected so they can be (selectively) overridden
com/pixelmed/dicom/DicomDictionary.java
---------------------
2002/08/07
add tree of database records
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/Makefile
---------------------
2002/08/07
add table browser of attributes for selected database record in tree
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/Makefile
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
---------------------
2002/08/07
incorporate database in viewer
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
---------------------
2002/08/07
tidy up internal key allocation scheme, other stuff to help use in DicomImageViewer
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/08/07
keep track of file in tree record
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2002/08/07
InformationEntity.toString() no longer returns upper case ... make explicit conversion for table names
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/08/07
InformationEntity.toString() no longer returns upper case
com/pixelmed/dicom/InformationEntity.java
---------------------
2002/08/07
add support for loading selected instance from database panel
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/08
add load from DICOMDIR selection into database; view selection at higher than image level in DICOMDIR now loads first file; add tooltips
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/08
return all multiple values in getQuotedEscapedSingleStringValueOrNull(), i.e. insert them in database
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2002/08/09
use revised dictionary with attributes in macros with IE specified
com/pixelmed/dicom/DicomDictionary.java
---------------------
2002/08/09
elide procedure step, concatentation and frame levels in model (getChild()) for now; in string value remove []
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/08/09
table of all attributes that vary per-frame
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/08/09
browser pane change event
com/pixelmed/display/event/BrowserPaneChangable.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeListener.java
---------------------
2002/08/09
add dictionary specific to database model
com/pixelmed/database/DicomDictionaryForFolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/08/10
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
---------------------
2002/08/11
add descriptions to dicomdir browser strings for each level
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/display/Makefile
---------------------
2002/08/15
support for supplemental palette color LUT
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2002/09/07
begin work on storage service class
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/Makefile
com/pixelmed/network/SOPClass.java
com/pixelmed/network/StorageServiceClass.java
com/pixelmed/network/TransferSyntax.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/07
begin work on output streams
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/BinaryFileInputStream.java
com/pixelmed/dicom/BinaryFileOutputStream.java
com/pixelmed/dicom/DicomFileOutputStream.java
com/pixelmed/dicom/Makefile
---------------------
2002/09/11
add support for Concatenation pseudo-directory record in model
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/utils/HexDump.java
---------------------
2002/09/12
constrain float precision on converting to string (e.g. for display)
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
---------------------
2002/09/13
better handling of tag names in tree and table browsers
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTreeRecord.java
---------------------
2002/09/13
zero pad hex group and element, and allow AT VR in table browser
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
---------------------
2002/09/14
com/pixelmed/network/Makefile
com/pixelmed/network/StorageServiceClass.java
---------------------
2002/09/14
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CStoreCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/StorageServiceClass.java(DEAD)
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/Makefile
---------------------
2002/09/14
binary and dicom read/write streams only not files
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/BinaryFileInputStream.java(DEAD)
com/pixelmed/dicom/BinaryFileOutputStream.java(DEAD)
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DicomFileInputStream.java(DEAD)
com/pixelmed/dicom/DicomFileOutputStream.java(DEAD)
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
---------------------
2002/09/14
move all transfer syntax strings into Dicom.TransferSyntax
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/TransferSyntax.java(DEAD)
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/15
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
com/pixelmed/utils/Makefile
---------------------
2002/09/15
clean up error handling on read/skip and add capability to guess transfer syntaxes
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/UnknownAttribute.java
---------------------
2002/09/15
use buffered input streams, don't exit on file load fail
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/09/15
move SOPClass to com.pixelmed.dicom
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
com/pixelmed/network/Makefile
com/pixelmed/network/SOPClass.java(DEAD)
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/15
add more strings for SOP classes, and convenience methods for detecting various storage SOP classes
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/15
C-STORE uses raw binary or dicom copy depending on transfer syntax match; use meta-header to determine
com/pixelmed/dicom/AttributeList.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/StorageSOPClass.java
---------------------
2002/09/15
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/network/StorageSOPClass.java
---------------------
2002/09/15
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/09/15
add outbound transfer support and properties to contain AE information to image viewer
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/15
com/pixelmed/network/Association.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/utils/ByteArray.java
---------------------
2002/09/16
set image selection path to file name when loaded from file dialog
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/09/17
adapt verification and storage SOP classes to work with various workstations
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/17
DicomImageViewer.bat
com/pixelmed/dicom/AttributeListTableBrowser.java
---------------------
2002/09/17
add network send target selection dialog
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/09/17
add sample properties file to the source tree
DicomImageViewer.bat
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2002/09/18
don't copy group lengths or length to end
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
---------------------
2002/09/18
add status to send
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/09/18
add send capability to dicomdir and local database
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/09/19
silence comments for network storage
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/VerificationSOPClass.java
---------------------
2002/09/19
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2002/09/20
factor out socket.close() to make derived classes independent of socket type
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2002/09/20
undo previous factoring out of socket
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2002/09/20
com/pixelmed/network/AssociationAcceptor.java
---------------------
2002/09/20
add StringUtilities and test of it
com/pixelmed/utils/Makefile
com/pixelmed/utils/StringUtilities.java
---------------------
2002/09/20
implement association negotiation for acceptor
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/Makefile
com/pixelmed/network/PresentationContext.java
---------------------
2002/09/20
com/pixelmed/dicom/SOPClass.java
---------------------
2002/09/21
Enhance transfer syntax selection policies to prefer explicit and reject others if available
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/StorageSOPClass.java
---------------------
2002/09/21
add support for rejecting association when called AET wrong
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociationAcceptor.java
---------------------
2002/09/21
add support for rejecting association when called AET wrong
com/pixelmed/network/AssociationAcceptor.java
---------------------
2002/09/21
evaluate responses to command and check status values
com/pixelmed/network/StorageSOPClass.java
---------------------
2002/09/21
evaluate responses to command and check status values
com/pixelmed/network/Association.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClass.java
com/pixelmed/network/VerificationSOPClass.java
com/pixelmed/utils/ByteArray.java
---------------------
2002/09/21
rename StorageSOPClass to StorageSOPClassSCU
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClass.java(DEAD)
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2002/09/21
add StorageSOPClassSCP
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2002/09/21
rename CStoreCommandMessage to CStoreRequestCommandMessage and add parsing from AttributeList for StorageSCP
com/pixelmed/network/CStoreCommandMessage.java(DEAD)
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2002/09/21
begin adding support for writing of DICOM attributes; primarily to help build command messages
com/pixelmed/dicom/AttributeList.java
---------------------
2002/09/21
begin adding support for writing of DICOM attributes; primarily to help build command messages
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/network/CStoreRequestCommandMessage.java
---------------------
2002/09/22
return C-STORE-RSP after receiving data
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2002/09/22
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/VersionAndConstants.java
---------------------
2002/09/22
add meta-header writing to storage SCP
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/network/Association.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2002/09/22
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
---------------------
2002/09/25
use shift key press for windowing accelerator
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2002/09/25
add storage SCP with multithreaded dispatcher, and tidy up support classes accordingly, as well as use com.pixelmed.dicom support to build and parse command messages and responses
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/Makefile
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClass.java(DEAD)
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2002/09/25
com/pixelmed/dicom/SOPClass.java
---------------------
2002/09/27
add handler for received object
com/pixelmed/network/Makefile
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2002/09/27
add storage scp into image viewer, and insert received objects into database
DicomImageViewer.bat
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/09/28
correct creation of float values to avoid -ve mantissa when values <1
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/display/Makefile
---------------------
2002/09/29
implement copy to local storage on database import and use same folder fore storage SCP
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2002/09/29
add concatenation support to database
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/Makefile
com/pixelmed/utils/StringUtilities.java
---------------------
2002/09/29
fix send/receive fail bug due to not completely reading PDU header (now use readInsistently)
DicomImageViewer.bat
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
---------------------
2002/10/01
improve display of instance numbers for concatenation and instance from database
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2002/10/02
add XML save capability
DicomImageViewer.bat
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
---------------------
2002/10/05
start to add support for sorting by dimensions
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
---------------------
2002/10/06
add user interface for selecting frame sort order
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
---------------------
2002/10/06
add cine scroll bar to display window
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SourceImageSortOrderPanel.java
---------------------
2002/10/06
add cine scroll bar to display window
com/pixelmed/display/SourceImageSortOrderPanel.java
---------------------
2002/10/06
DicomImageViewer.sh
hsqldb.jar
jaxp-api.jar
sax.jar
xalan.jar
xercesImpl.jar
xsltc.jar
---------------------
2002/10/08
event tracking experiments
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/08
remove component factory experiment
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/08
add screen snapshot capability
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/08
comment out experimental screen shot code that doesn't work on windows due to keyboard focus issues
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/08
re-activate (relatively) harmless screenshot code
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/12
add specific character set support
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SuitableFontFinder.java
---------------------
2002/10/12
add specific character set support
com/pixelmed/dicom/Makefile
---------------------
2002/10/12
com/pixelmed/dicom/Makefile
---------------------
2002/10/12
add specific character set support
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SuitableFontFinder.java
---------------------
2002/10/12
use UImanager to change fonts
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SuitableFontFinder.java
---------------------
2002/10/12
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/12
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/13
begin work on cfind scu
com/pixelmed/dicom/SOPClass.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/Association.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/ReceivedDataHandler.java
---------------------
2002/10/13
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/Makefile
---------------------
2002/10/13
create static dictionary when asked for as well as on read
com/pixelmed/dicom/AttributeList.java
---------------------
2002/10/13
fix up value length bug in string attribute ... was setting it twice
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
---------------------
2002/10/13
more work on queries
Makefile
com/pixelmed/network/Association.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2002/10/13
more work on queries
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTree.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/14
turn query responses into tree
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTree.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/16
start adding plotting stuff
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/display/Makefile
com/pixelmed/display/PlotGraph.java
---------------------
2002/10/16
work on plotting spectra
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/display/Makefile
com/pixelmed/display/PlotGraph.java
---------------------
2002/10/16
work on plotting spectra
com/pixelmed/display/PlotGraph.java
---------------------
2002/10/16
add OF support
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2002/10/16
add spectroscopy to image viewer
com/pixelmed/dicom/SOPClass.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangable.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeListener.java
---------------------
2002/10/16
add spectroscopy to image viewer
com/pixelmed/display/Makefile
---------------------
2002/10/17
DicomImageViewer.bat
DicomImageViewer.sh
Makefile
---------------------
2002/10/17
add cine and sort panel for spectra
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
---------------------
2002/10/17
cache offscreen images of rendered spectra
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
---------------------
2002/10/17
some optimization work to speed up drawing spectrum
com/pixelmed/display/PlotGraph.java
---------------------
2002/10/18
rename QueryTree to QueryTreeModel
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTree.java(DEAD)
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/18
add browser code
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
---------------------
2002/10/18
add remote query to viewer
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/QueryTreeBrowser.java
---------------------
2002/10/18
add remote query selection
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
---------------------
2002/10/18
fix receive bug (handler loosing association, because redeclared in subclass), switch to byte rather than int presentation contexts to avoid sign extension (was failing to match due to int sign extension when many contexts), and add retrieve code
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/Makefile
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2002/10/18
install retrieve function into viewer
com/pixelmed/dicom/SOPClass.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/18
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2002/10/18
com/pixelmed/query/Makefile
---------------------
2002/10/19
retrieve from specified retrieve source and back to ourselves (was round the wrong way)
com/pixelmed/query/QueryInformationModel.java
---------------------
2002/10/19
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2002/10/19
clear query browser windows on selecting new AE or on query (in case fails)
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/10/19
change XML output to split into individually numbered values
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2002/10/20
qualify instance level records as image, spectra, etc. for DICOMDIR and query as well as local DB
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/21
add docs
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/logo.ai
docs/DicomImageViewer/logo.bmp
---------------------
2002/10/21
add Specific Character Set to C-FIND
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/21
add Specific Character Set at all levels of query if present in request identifier
com/pixelmed/query/QueryInformationModel.java
---------------------
2002/10/21
add extra query keys, specific support for ModalitiesInStudy, complete conformance statement for c-find and c-move
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/QueryInformationModel.java
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
---------------------
2002/10/21
tidy up Q/R to handle different workstations, especially Leonardo limitations on patient attributes and absence of RetrieveAETitle
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2002/10/21
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2002/10/22
tidy up messages, especially with respect to other end releasing association
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/Association.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/Makefile
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2002/10/22
add query filter capability
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/Makefile
---------------------
2002/10/22
dom.jar
---------------------
2002/10/23
DicomImageViewer.bat
DicomImageViewer.sh
Makefile
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2002/10/25
preparse for 20021028 release
DicomImageViewer.bat
DicomImageViewer.sh
Makefile
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2002/11/01
switch to confirming font by family not name (for mac 1.4.1 DP2)
com/pixelmed/display/DicomImageViewer.java
---------------------
2002/11/01
do not convert most favorable if 1.4.1 on MacOS
com/pixelmed/display/SingleImagePanel.java
---------------------
2002/11/13
copy our preferences, not sample preferences
com/pixelmed/display/Makefile
---------------------
2002/11/22
update data dictionary for draft 2003
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2002/11/23
add numbers to items in xml dump to make xslt validation easier
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2003/01/19
blank screen(s) on file load fail
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/01/19
fixed numbering of frame sliders - [bugs.mrmf] (000030) Frame sliders numbered from zero, not 1
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
---------------------
2003/01/19
fix reset frame order to implicit button - [bugs.mrmf] (000022) Sort frames by Implicit button does not work after choosing by Dimension
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
---------------------
2003/01/21
add display of real world values in status line
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/RealWorldValueTransform.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2003/02/01
tidy up RealWorldValueTransform and move from .display to .dicom; fix up SingleImagePanel constructors that were out of date; use mouse moved to show real world value only if non-null transform and status sink
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/display/Makefile
com/pixelmed/display/RealWorldValueTransform.java(DEAD)
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/02/01
remove TestAppAWT.java which is unused and confuses javadoc
Makefile
com/pixelmed/display/TestAppAWT.java(DEAD)
---------------------
2003/02/01
add javadoc tags automatically from JDocHelper 0.8.2
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DicomDictionaryForFolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SuitableFontFinder.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/event/BrowserPaneChangable.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeListener.java
com/pixelmed/display/event/SourceImageSelectionChangable.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeListener.java
com/pixelmed/display/event/SourceSpectrumSelectionChangable.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeListener.java
com/pixelmed/display/event/StatusChangable.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/StatusChangeListener.java
com/pixelmed/display/event/WindowCenterAndWidthChangable.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeListener.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/StringUtilities.java
---------------------
2003/02/01
Makefile
---------------------
2003/02/01
Makefile
---------------------
2003/02/01
add VOI transform extraction from dicom tags and application until user changes it; also track window size for real world value display to avoid null exceptions on dstImage in mouseMoved()
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2003/02/01
tidy up comments
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/VOITransform.java
---------------------
2003/02/01
start adding support for rescale values
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2003/02/01
finish adding support for rescale parameters, including for statistical auto-window
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/02/02
our.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/02/02
tidy up docs for SPIE release
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/ReleaseNotes_20020202.doc
docs/DicomImageViewer/ReleaseNotes_20020202.pdf
docs/DicomImageViewer/ReleaseNotes_20021028.doc
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2003/02/02
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/02/02
add release string, continue tidying up
COPYRIGHT
Makefile
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/ReleaseNotes_20020202.pdf(DEAD)
---------------------
2003/02/02
add socket send buffer size setting to improve performance on windows
com/pixelmed/network/AssociationInitiator.java
---------------------
2003/02/02
constrain max pdu size to 16384 (no larger than tcp send buffer) to prevent problems with two DicomImageViewer sending (sender on windows) with small packets
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2003/02/12
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2003/02/18
updated dictionary to 2003 standard from dicom3tools
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2003/02/18
added own JIS 0208 encoding when JREs is not working
com/pixelmed/dicom/JIS0208Mapping.dat
---------------------
2003/02/18
added own JIS 0208 encoding when JREs is not working; added UTF8 and GB18030 encodings
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2003/02/18
added UTF8 and GB18030 encoding tests
com/pixelmed/dicom/Makefile
---------------------
2003/02/18
Makefile
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/display/Makefile
---------------------
2003/02/23
add support for deflated transfer syntax
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2003/02/23
add support for deflated transfer syntax (including inflating before network send)
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/display/Makefile
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/02/23
update copyright notice to 2003
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTree.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DicomDictionaryForFolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SuitableFontFinder.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/event/BrowserPaneChangable.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeListener.java
com/pixelmed/display/event/SourceImageSelectionChangable.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeListener.java
com/pixelmed/display/event/SourceSpectrumSelectionChangable.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeListener.java
com/pixelmed/display/event/StatusChangable.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/StatusChangeListener.java
com/pixelmed/display/event/WindowCenterAndWidthChangable.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeListener.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/HexDump.java
---------------------
2003/02/23
com/pixelmed/display/Makefile
---------------------
2003/02/25
disambiguate same named attributes in top-level dataset vs. shared functional groups
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/display/Makefile
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/02/28
DicomImageViewer.bat
DicomImageViewer.sh
---------------------
2003/03/02
add debug property for query
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2003/03/12
convert to most favorable image type for all non-grayscale images, to both RGB and RGBA destinations
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2003/03/12
extend debug flag to all SCU/SCP; eliminate spurious association released prematurely message; also begin extending javadoc comments and clean up some messages and scopes
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2003/03/12
extend debug flag to all SCU/SCP
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/03/12
Makefile
com/pixelmed/query/QueryInformationModel.java
---------------------
2003/03/15
use common FloatFormatter utility to limit precision of float strings
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/Makefile
---------------------
2003/03/15
take signed into account for real world value status display by sign extending
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/03/15
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/03/18
add excalibur
excalibur-bzip2-1.0.jar
---------------------
2003/03/20
change archive names, use bzip2, use gnutar
Makefile
---------------------
2003/03/20
tidy up supplemental palette stuff, choosing largest based on several attributes, providing high value (not zero) default, and computing max value clamped within largest gray range correctly (was greater than rather than less than)
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2003/03/21
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/03/23
timing
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/03/30
add -O optimization flag, and reorganize order of top-level compilations
Makefile
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/network/Makefile
com/pixelmed/query/Makefile
com/pixelmed/utils/Makefile
---------------------
2003/03/30
swap order of SCU and SCP for storage in overview
docs/DicomImageViewer/Conformance.doc
---------------------
2003/03/30
experiments with oru own resizing, to support downsampling large grayscale images
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/03/30
add doxygen
Doxyfile
Makefile
---------------------
2003/03/30
tidy up javadoc based on doxygen feedback
Makefile
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2003/04/04
comment out debug messages
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2003/04/04
add validator
com/pixelmed/validate/CommonDicomIODValidationRules.xsl
com/pixelmed/validate/CompileDicomIODDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/Makefile
---------------------
2003/04/04
changes from original command line validator
com/pixelmed/validate/NOTES
---------------------
2003/04/04
make LUT Label into SH (CP 370)
com/pixelmed/dicom/DicomDictionary.java
---------------------
2003/04/04
build date from jar file resource,add validator
Makefile
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/04/04
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/ReleaseNotes_20020202.doc(DEAD)
docs/DicomImageViewer/ReleaseNotes_20030202.doc
docs/DicomImageViewer/ReleaseNotes_20030403.doc
---------------------
2003/04/04
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/04/04
use updated dictionary from dicom3tools with fixed scripts to set concatentation and instance IEs manually where necessary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2003/04/04
updated for 2003/04/04 release
docs/DicomImageViewer/ReleaseNotes_20030403.doc
---------------------
2003/04/04
updated for 2003/04/04 release
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/ReleaseNotes_20030403.doc(DEAD)
docs/DicomImageViewer/ReleaseNotes_20030404.doc
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2003/04/04
use more recent jar files from jwsdp-1.1
dom.jar
jaxp-api.jar
sax.jar
xalan.jar
xercesImpl.jar
xsltc.jar
---------------------
2003/04/04
use more recent jar files from hsqldb1_7_1
hsqldb.jar
---------------------
2003/04/04
set property for xsltc processor
DicomImageViewer.bat
DicomImageViewer.sh
---------------------
2003/04/04
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/ReleaseNotes_20030404.doc
---------------------
2003/04/04
during resampling, check for ushort databuffer class before casting
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/04/10
separate loops for drawing boxes vs. spectra, and use anti-aliasing for the former; gets rid of some lines too thick problem
com/pixelmed/display/PlotGraph.java
---------------------
2003/04/17
use cached tables for database and shutdown and compact on window closure
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/04/17
add a method to find all records for an IE regardless of parent
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2003/04/17
add a method to return local parent reference column name
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2003/04/18
factor out common model stuff into new DicomDatabaseInformationModel class
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/Makefile
---------------------
2003/04/18
use only the dictionary supplied by the constructor, not that referenced by attribute lists
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForFolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/Makefile
com/pixelmed/database/StudySeriesInstanceModel.java
---------------------
2003/04/18
add relevant clinical trial attributes
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
---------------------
2003/04/18
add update value of selected key in selected record method
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2003/04/24
extensively rework DicomStreamCopier to read but not copy metaheader, automatically push codec onto stream at start of dataset (same for AttributeList.read()), factor out that stuff from StorageSCU and use new DicomStreamCopier, and make minor changes to keep track of whether reading metaheader or dataset in DicomInputStream
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/04/24
move creation of attributes based on VR to factory class, requires adding constructors with Long rather than long vl
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2003/04/24
vl of signed and unsigned short and long were twice too large; was setting valueLength and then using addValue() !
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2003/04/24
add methods to deidentify and add clinical trial modules attributes
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2003/04/24
tidy up writing capability and add sequence writing and include tests
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
---------------------
2003/04/24
various constructors added to support writing and factory methods for empty attributes
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
---------------------
2003/04/25
add File as well as String write() method
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/Makefile
---------------------
2003/04/25
add write capability
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
---------------------
2003/04/25
add more static routines for building meta information from attribute list
com/pixelmed/dicom/FileMetaInformation.java
---------------------
2003/04/25
add write() using File rather than String for output
com/pixelmed/dicom/AttributeList.java
---------------------
2003/04/25
make methods public, PatientID is Long not Short String
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2003/04/25
set valueLength in addValues() rather than doCommonConstructorStuff(), otherwise does get recorded when adding values !
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
---------------------
2003/04/25
switch to using native methods from Float and Double for reading and writing IEEE 754 values
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
---------------------
2003/04/26
add record insertion time to all records, addexclude list to database browser and put local keys, record insertion time and filename in it
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/MapTableModel.java
---------------------
2003/04/26
only set title if not null, allows for null argument in constructors
com/pixelmed/display/ApplicationFrame.java
---------------------
2003/05/01
add more robust file closing
com/pixelmed/dicom/AttributeList.java
---------------------
2003/05/01
tidy up generation of documentation, xmlpack jar file, and release packages
Makefile
---------------------
2003/05/01
use xmlpack rather than individual jar files for compile and tests
Doxyfile
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/validate/Makefile
---------------------
2003/05/01
close file after reading in test
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
---------------------
2003/05/01
make paths to test images relative
com/pixelmed/database/Makefile
---------------------
2003/05/01
add package description for javadoc
com/pixelmed/database/package.html
---------------------
2003/05/02
more javadoc
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2003/05/04
more work on javadoc
Makefile
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/dicom/Makefile
---------------------
2003/05/04
remove 'Folder' from names of PatientStudyStepSeriesInstanceFrameModel and DicomDictionaryForPatientStudyStepSeriesInstanceFrameModel
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForFolderPatientStudyStepSeriesInstanceFrameModel.java(DEAD)
com/pixelmed/database/DicomDictionaryForPatientStudyStepSeriesInstanceFrameModel.java
com/pixelmed/database/FolderPatientStudyStepSeriesInstanceFrameModel.java(DEAD)
com/pixelmed/database/Makefile
com/pixelmed/database/PatientStudyStepSeriesInstanceFrameModel.java
---------------------
2003/05/04
com/pixelmed/database/package.html
---------------------
2003/05/04
remove 'Folder' from names of PatientStudyStepSeriesInstanceFrameModel and DicomDictionaryForPatientStudyStepSeriesInstanceFrameModel
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/05/04
more work on javadoc
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2003/05/06
make stream copy method static rather than unnecessary constructor
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/utils/CopyStream.java
---------------------
2003/05/06
more javadoc work
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/StringUtilities.java
---------------------
2003/05/06
more javadoc work
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
---------------------
2003/05/09
rename classes
com/pixelmed/database/DatabaseTree.java(DEAD)
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudyStepSeriesInstanceFrameModel.java(DEAD)
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/PatientStudyStepSeriesInstanceFrameModel.java(DEAD)
---------------------
2003/05/09
more documentation work
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/Makefile
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/package.html
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/05/09
add base class for dictionary
com/pixelmed/dicom/DicomDictionaryBase.java
---------------------
2003/05/10
more javadoc
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/dicom/package.html
com/pixelmed/display/package.html
com/pixelmed/network/package.html
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/package.html
com/pixelmed/utils/package.html
---------------------
2003/05/10
more javadoc
Makefile
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2003/05/10
more javadoc
com/pixelmed/validate/package.html
---------------------
2003/05/11
add write support
com/pixelmed/dicom/AttributeTagAttribute.java
---------------------
2003/05/11
add meta header to output in main test
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2003/05/11
add support for character set on writing, not just reading (though no write support for ISO 2022 or buggy JIS yet)
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
---------------------
2003/05/11
make main method of AttributeList useful as copier in its onw right, and amend test cases accordingly
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
---------------------
2003/05/11
tidy up the put and get methods to be sure null attributes never inserted
com/pixelmed/dicom/AttributeList.java
---------------------
2003/05/11
add test for adding new attributes
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2003/05/11
rename removeifPresent() to remove() to mirror superclass remove(), and update description of put to reflect that there is an implicit remove prior to any put
com/pixelmed/dicom/AttributeList.java
---------------------
2003/05/11
update javadoc
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
com/pixelmed/validate/DicomInstanceValidator.java
---------------------
2003/05/11
update IP address for helgray to 103
our.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/05/15
factor out changable interfaces and put in default implementations, when building panels with changable event sinks, add selves as listeners, start work on referenced image panel
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/event/BrowserPaneChangableDefaultImplementation.java
com/pixelmed/display/event/SourceImageSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/SourceSpectrumSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/StatusChangableDefaultImplementation.java
com/pixelmed/display/event/WindowCenterAndWidthChangableDefaultImplementation.java
---------------------
2003/05/15
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/05/15
flush after copy even though not closing, else may be truncated (CARANGIO was failing)
com/pixelmed/utils/CopyStream.java
---------------------
2003/05/15
get and report cause when making an attribute fails
com/pixelmed/dicom/AttributeFactory.java
---------------------
2003/05/16
make more sophisticated descriptions for images, and use in database and DICOMDIR browsers
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2003/05/16
make more sophisticated descriptions for images, and use in database and DICOMDIR browsers
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TagFromName.java
---------------------
2003/05/16
make list of possible reference images
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/05/16
factor out getNamedAttributeFromWithinSequenceWithSingleItem methods
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2003/05/16
Extract ImageOrientationPatient from SharedFunctionalGroupsSequence and insert in INSTANCE table
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2003/05/16
Take care when InstanceNumber is not present
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2003/05/16
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2003/05/16
add orientation plane description mechanism
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2003/05/17
add geometry package for posting localizers
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/Makefile
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/geometry/package.html
---------------------
2003/05/17
work on localizers
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DicomImageViewer_preref.java
com/pixelmed/display/LocalizationChangable.java
com/pixelmed/display/LocalizationChangableDefaultImplementation.java
com/pixelmed/display/LocalizationChangeEvent.java
com/pixelmed/display/LocalizationChangeListener.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/Makefile
---------------------
2003/05/17
com/pixelmed/display/DicomImageViewer_preref.java(DEAD)
---------------------
2003/05/18
more work on localizers - make single image panel less knowledgable and add localizer manager
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/05/18
more work on localizers - prior to removing localizer event but after adding manager
com/pixelmed/geometry/ProjectSlice.java
---------------------
2003/05/18
remove localization change event
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/LocalizationChangable.java(DEAD)
com/pixelmed/display/LocalizationChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/LocalizationChangeEvent.java(DEAD)
com/pixelmed/display/LocalizationChangeListener.java(DEAD)
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/05/22
factor out some commonality in localization, add ability to intersect not just project, move image geometry into single image panel and add feedback of 3D location in status updates
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
---------------------
2003/05/23
add position status reporting to spectroscopy panel
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
---------------------
2003/05/23
tidy up various details, including consistent constructors, row and col the right way around when computing row and column lengths and location on image, support geometry of old single frame objects when available
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2003/05/23
work on spectroscopy references
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SpectraPanel.java
---------------------
2003/05/23
clean up 2d vs. 3d pixel/voxel spacing and dimensions
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
---------------------
2003/05/23
more work on volume localizers; traverse edges in correct order; use half width either side; spectra and lumbar and brains work; carotid angio does not :(
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2003/05/23
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
---------------------
2003/05/24
set helgray address back to 100
our.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/05/24
add vecmath jar file
vecmath1.2-1.14.jar
---------------------
2003/05/24
handle when localizer available but doesn't contain correct geometry
Makefile
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/geometry/IntersectSlice.java
---------------------
2003/05/26
add spectroscopy volume localization
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
---------------------
2003/05/26
add spectroscopy object
com/pixelmed/validate/CommonDicomIODValidationRules.xsl
com/pixelmed/validate/CompileDicomIODDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2003/05/26
add support for localizers found by searching database
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
---------------------
2003/05/26
add support for localizers found by searching database, start work on spectroscopy volume localization
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/05/26
spectroscopy volume localization
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2003/05/26
spectroscopy volume localization
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2003/05/31
DicomImageViewer.bat
DicomImageViewer.sh
our.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/05/31
have various browser tree records implement TreeNode, both because they should and to support exapnd/collapse in new class based on JTree that we now use throughout that supports keyboard shortcuts for collapse/expand all at and below selected node
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/utils/JTreeWithAdditionalKeyStrokeActions.java
com/pixelmed/utils/Makefile
---------------------
2003/06/01
spectra panel rows and columns were swapped
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/06/01
looking up coordinates was not accounting for pixel spacing
com/pixelmed/geometry/GeometryOfSlice.java
---------------------
2003/06/01
rework getting corners of things to be more correct (and handle things one voxel in size), and consequently correct mapping back into image space to handle edges of images at 0.5 position; also correct instances of swapped row/column spacing
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2003/06/01
com/pixelmed/dicom/DicomDictionaryBase.java
---------------------
2003/06/01
add parsing of double arrays from string
com/pixelmed/utils/FloatFormatter.java
---------------------
2003/06/01
add array comparison
com/pixelmed/dicom/ArrayCopyUtilities.java
---------------------
2003/06/01
add static method to get orientation only
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
---------------------
2003/06/01
make window methods static so they can be used elsewhere (e.g. in SpectraPanel)
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/06/01
change form of SourceImageSelectionChangeEvent to pass SourceImage so its attributes can be used elsewhere, e.g. in SpectraPanel
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
---------------------
2003/06/01
add a bunch of methods to support matching a background image to a spectroscopy volume
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2003/06/01
add background image to spectroscopy panel
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SpectraPanel.java
---------------------
2003/06/02
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/ReleaseNotes_20030602.doc
---------------------
2003/06/11
improve handling of signed pixels esp. for < 8 bits, and handle sign on status reporting
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2003/07/05
speed startup by lazy instantiation of validator
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/07/05
tidy up paths
com/pixelmed/display/Makefile
---------------------
2003/07/05
work on interactive drawing
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/07/11
check for null database before closing
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/07/11
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2003/07/24
implement ARTIM on release, else AW 3.1 complains send failed if transport connection dropped immediately
com/pixelmed/network/Association.java
---------------------
2003/07/24
minor test messages, commented out
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2003/08/08
reuse same line rather than reallocating new one each time
com/pixelmed/display/PlotGraph.java
---------------------
2003/08/08
switch to drawing path rather than individuals lines
com/pixelmed/display/PlotGraph.java
---------------------
2003/08/21
more javadoc
com/pixelmed/dicom/SOPClass.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2003/09/13
add feedback of sample offset position of cursor in spectroscopy status bar
com/pixelmed/display/SpectraPanel.java
---------------------
2003/09/13
add window center and width feedback
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/09/13
our.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/09/13
tidy up statistical default values for window in case of signed images
com/pixelmed/display/SourceImage.java
---------------------
2003/09/14
update data dictionary and implement draft of CP 382_02 on metabolite map description
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2003/09/14
handle case of multiframe image background with no VOI information properly
com/pixelmed/display/SpectraPanel.java
---------------------
2003/09/14
fix size of scrolling background and reference image selection panels
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/09/14
docs/DicomImageViewer/ReleaseNotes_20030914.doc
docs/DicomImageViewer/ReleaseNotes_20030914.doc
---------------------
2003/09/14
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2003/09/16
fix bug that was ignoring PDVs less than or equal to 6 bytes (e.g. empty with last fragment set)
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/09/16
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2003/09/16
tidy up debug levels
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2003/09/16
tree selection recursively walks subtree find all file names
com/pixelmed/database/DatabaseTreeBrowser.java
---------------------
2003/09/16
handle null case in file path vector
com/pixelmed/dicom/DicomDirectoryBrowser.java
---------------------
2003/09/16
database tree selection recursively walks subtree find all file names
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/09/22
structure query filter panel by infortmation entity
com/pixelmed/query/FilterPanel.java
---------------------
2003/09/22
fix signature of referenced method in javadoc
com/pixelmed/database/DatabaseTreeBrowser.java
---------------------
2003/09/22
correct conformance statement wrt. SCU role in table as well as association acceptance vs. initiation order
docs/DicomImageViewer/Conformance.doc
---------------------
2003/09/22
update java doc and tweak some protection and abstraction of classes
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2003/09/23
update java doc
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
---------------------
2003/09/25
more javadoc
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
---------------------
2003/09/25
switch all debuggin and exception messages to stderr from stdout
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SuitableFontFinder.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/event/SourceImageSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/SourceSpectrumSelectionChangableDefaultImplementation.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/JTreeWithAdditionalKeyStrokeActions.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/validate/DicomInstanceValidator.java
---------------------
2003/09/27
[bugs.mrmf] (000074) Wrong localizer position shown if frames already scrolled past 1st - fixed by caching current index and sort order on change event, and using those values when selecting a new reference image
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/10/03
fix our own resampling of 16 bit unsigned which was incorrectly sign extending
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/10/05
ignore window values if width is zero
com/pixelmed/display/SingleImagePanel.java
---------------------
2003/10/09
more javadoc
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/network/package.html
com/pixelmed/utils/JTreeWithAdditionalKeyStrokeActions.java
---------------------
2003/10/12
remove unused SuitableFontFinder.java (and put in experiments)
com/pixelmed/display/Makefile
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SuitableFontFinder.java(DEAD)
---------------------
2003/10/12
tidy up javadoc, and move to more recent version of doxygen (change config file)
Doxyfile
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationOutputStream.java
---------------------
2003/10/12
add snapshot description
docs/DicomImageViewer/UserManual.doc
---------------------
2003/10/12
factor out display events into separate sub-package
Makefile
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/event/BrowserPaneChangable.java
com/pixelmed/display/event/BrowserPaneChangableDefaultImplementation.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeListener.java
com/pixelmed/display/event/SourceImageSelectionChangable.java
com/pixelmed/display/event/SourceImageSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeListener.java
com/pixelmed/display/event/SourceSpectrumSelectionChangable.java
com/pixelmed/display/event/SourceSpectrumSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeListener.java
com/pixelmed/display/event/StatusChangable.java
com/pixelmed/display/event/StatusChangableDefaultImplementation.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/StatusChangeListener.java
com/pixelmed/display/event/WindowCenterAndWidthChangable.java
com/pixelmed/display/event/WindowCenterAndWidthChangableDefaultImplementation.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeListener.java
com/pixelmed/display/event/package.html
---------------------
2003/10/12
more javadoc
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/TextAnnotation.java
---------------------
2003/10/12
DicomImageViewerWithCDJRE.bat
README
com/pixelmed/display/event/Makefile
---------------------
2003/10/12
don't force clean and remake of pixemed.jar for source and binary releases
Makefile
---------------------
2003/10/12
don't force clean and remake of pixemed.jar for source and binary releases
Makefile
---------------------
2003/10/12
reposition pixelmed.jar in source and binary release tars
Makefile
---------------------
2003/10/12
remove pixelmed.jar from exclude list in source and binary release tars
Makefile
---------------------
2003/10/12
remove pixelmed.jar from exclude list in source and binary release tars
Makefile
---------------------
2003/10/12
remove pixelmed.jar from exclude list in source and binary release tars
Makefile
---------------------
2003/10/12
exclude NOTES files from releases
Makefile
---------------------
2003/10/14
Makefile
---------------------
2003/10/16
include photometric interpretation and SOP Class in DICOMDIR and database browsers
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2003/10/16
Add Modality in browser description of Series in DICOMDIR and local database
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2003/10/17
turn on support for proposing and accepting deflate and bzip2 transfer syntaxes on the network, handle the need to pad to even length PDVs, and make loading of bzip codec class dynamic (so one can leave it out of the classpath harmlessly), and don't accept the transfer syntax if bzip codec class not loadable
com/pixelmed/dicom/AttributeList.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/10/19
add support for use of big endian and deflate and bzip2 transfer syntaxes over the network, by proposing and accepting their presentation contexts, augmenting the stream copier to change endianness as well as push compressors on the output stream, and take care not to pad PDVs when flush called on AssociationOutputStream by compressor
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/Makefile
---------------------
2003/10/19
Make UIDs visible in browser, both for DICOMDIR records and files
com/pixelmed/dicom/AttributeListTableModel.java
---------------------
2003/10/19
Include TransferSyntaxUID and SourceApplicationEntityTitle in information entities and database models
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2003/10/20
include source AE and transfer syntax in received file messages
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2003/10/21
split docs out of releases
Makefile
---------------------
2003/10/21
add forgotten vecmath
README
---------------------
2003/10/21
add (mandatory) status attribute to echo response (was breaking oldenburg echoscu)
com/pixelmed/network/CEchoResponseCommandMessage.java
---------------------
2003/10/23
handle possibility of empty sub-properties earlier, e.g. in definitions of remote AE's
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/11/01
add short cut notes
docs/jtreeshortcutnotes.rtf
docs/DicomImageViewer/UserManual.doc
---------------------
2003/11/06
more line drawing timing details, switch back to lines rather than path since better on 1.4.2/Panther
com/pixelmed/display/PlotGraph.java
---------------------
2003/11/13
experiments with full screen mode
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/display/DicomImageViewer.java
docs/DicomImageViewer/UserManual.doc
---------------------
2003/11/14
more full screen experiments
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/11/15
apple full screen without menu bar using reflection
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/11/16
add private encapsulated uncompressed transfer syntax
com/pixelmed/dicom/TransferSyntax.java
---------------------
2003/11/16
set geometry when single slice even if number of frames absent
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
---------------------
2003/11/16
remove Apple menu bar only if full screen required
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/11/16
add preliminary support for unencapsulation
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/Makefile
---------------------
2003/11/16
com/pixelmed/dicom/AttributeList.java
---------------------
2003/11/18
more encapsulated pixel data experiments
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2003/11/18
refactor iod descriptions as per Sup 58, and add Sup 58 dictionary (no CT IOD yet)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2003/11/19
added syslog
com/pixelmed/utils/Makefile
com/pixelmed/utils/Syslog.java
---------------------
2003/11/19
com/pixelmed/utils/Syslog.java
---------------------
2003/11/19
com/pixelmed/utils/Syslog.java
---------------------
2003/11/22
add enhanced CT SOP Class
com/pixelmed/dicom/SOPClass.java
---------------------
2003/11/22
com/pixelmed/utils/Syslog.java
---------------------
2003/11/22
start work on synchronizing slices by anatomical position
com/pixelmed/display/Makefile
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/event/SourceImageSelectionChangableDefaultImplementation.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2003/11/24
add string descriptions of facilities and priorities
com/pixelmed/utils/Syslog.java
---------------------
2003/11/28
com/pixelmed/utils/Syslog.java
---------------------
2003/11/28
some more geometric functions for registration support
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2003/11/28
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2003/12/01
add logistic curve for window center/width and user interface for toggling between linear and logistic
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/event/BrowserPaneChangableDefaultImplementation.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangable.java
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangeEvent.java
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangeListener.java
com/pixelmed/display/event/SourceImageSelectionChangable.java
com/pixelmed/display/event/SourceImageSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/SourceSpectrumSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/StatusChangableDefaultImplementation.java
com/pixelmed/display/event/WindowCenterAndWidthChangable.java
com/pixelmed/display/event/WindowCenterAndWidthChangableDefaultImplementation.java
---------------------
2003/12/11
implement numeric scalar addValue() methods for string attributes
com/pixelmed/dicom/StringAttribute.java
---------------------
2003/12/11
add CP 353 echo train length attributes
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2003/12/11
still describe color even if no PhotometricInterpretation
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2003/12/11
add enhanced CT, compressed transfer syntaxes
docs/DicomImageViewer/Conformance.doc
---------------------
2003/12/12
implement sort order
com/pixelmed/display/SpectraPanel.java
---------------------
2003/12/12
revisionist history
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/12
revisionist history
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/12
revisionist history
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/12
revisionist history
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/12
revisionist history
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/12
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/12
move into single file with tagged releases
docs/DicomImageViewer/ReleaseNotes_20021028.doc(DEAD)
docs/DicomImageViewer/ReleaseNotes_20030202.doc(DEAD)
docs/DicomImageViewer/ReleaseNotes_20030404.doc(DEAD)
docs/DicomImageViewer/ReleaseNotes_20030602.doc(DEAD)
docs/DicomImageViewer/ReleaseNotes_20030914.doc(DEAD)
---------------------
2003/12/12
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2003/12/13
add inherit.gif to avoid javadoc 1.4.2DP1 bug that omits it
Makefile
inherit.gif
---------------------
2003/12/13
add inherit.gif to avoid javadoc 1.4.2DP1 bug that omits it
Makefile
---------------------
2003/12/14
add region selection event handling
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/RegionSelectionChangable.java
com/pixelmed/display/event/RegionSelectionChangableDefaultImplementation.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeListener.java
---------------------
2003/12/31
have main() look in metaheader for SOP Class and Instance rather than needing them on command line
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/12/31
update table renderer demo reference URL
com/pixelmed/dicom/AttributeListTableBrowser.java
---------------------
2003/12/31
allow compression to be specified, check for absence of bzip2 codec before proposing
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2003/12/31
add compression level flag to properties
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2003/12/31
add compression level flag to properties, make display and spectro tabs exclusive, disable both if nothing loaded, and populate local database tab immediately on start (without image load) and selection
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/12/31
change debugging level settings
com/pixelmed/network/AssociationOutputStream.java
---------------------
2003/12/31
com/pixelmed/display/DicomImageViewer.java
---------------------
2003/12/31
compression property, disabled tabbed panes
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2003/12/31
tidy up javadoc
com/pixelmed/display/SourceImage.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2004/01/02
arguments in main() for tiles per row and column were swapped
com/pixelmed/display/PlotGraph.java
---------------------
2004/01/02
first position for Y value was always zero, not offsetIntoSamples
com/pixelmed/display/PlotGraph.java
---------------------
2004/01/04
begin work on SCP-ECG
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section6.java
com/pixelmed/scpecg/SectionHeader.java
---------------------
2004/01/04
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section6.java
com/pixelmed/scpecg/SectionHeader.java
---------------------
2004/01/04
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section6.java
---------------------
2004/01/04
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section4.java
---------------------
2004/01/04
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/01/04
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section6.java(DEAD)
---------------------
2004/01/18
prior to refactoring decode to return single values
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/01/18
factored out one word at a time decode() method
com/pixelmed/scpecg/HuffmanDecoder.java
---------------------
2004/01/18
decoding with adding referenced beat works - still need to interpolate undecimation
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section3.java
---------------------
2004/01/18
use decimation offset count rather than sample number for modulo operation
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/01/18
interpolation on un-decimation
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/01/18
align fiducials for QRS addition correctly
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/01/18
no interpolation
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/01/20
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8.java
---------------------
2004/01/20
signed 16 was not sign extending ... make it return a short not an int
com/pixelmed/dicom/BinaryInputStream.java
---------------------
2004/01/20
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8.java
---------------------
2004/01/22
make package imports specific to classes actually used
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
---------------------
2004/01/22
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section7.java
---------------------
2004/01/22
add ApplicationFrame constructor with just title
com/pixelmed/display/ApplicationFrame.java
---------------------
2004/01/22
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
---------------------
2004/01/22
return lead names
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section3.java
---------------------
2004/01/22
use SCPECG lead names
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/SCPSourceECG.java
---------------------
2004/01/22
major change to drawing: draw directlt (no background image) and maintain fixed scale on resizing
com/pixelmed/displaywave/ECGPanel.java
---------------------
2004/01/24
derive additional unipolar leads
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section3.java
---------------------
2004/01/24
add preferred display sequence sorting
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
---------------------
2004/01/24
work on building JTrees
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/SectionHeader.java
---------------------
2004/01/24
automatically add new nodes to parent
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/SectionHeader.java
---------------------
2004/01/24
more tree work
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8.java
---------------------
2004/01/24
give sections names and use in tree
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8.java
---------------------
2004/01/24
com/pixelmed/scpecg/Section10.java
---------------------
2004/01/24
added section 11
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section8.java(DEAD)
com/pixelmed/scpecg/Section8Or11.java
---------------------
2004/01/24
use missing values in section 7
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section7.java
---------------------
2004/01/24
refactor makeStringFromByteArrayRemovingAnyNulls into Section.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section1.java
---------------------
2004/01/24
com/pixelmed/scpecg/Section8Or11.java
---------------------
2004/01/24
quieten down
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/Section7.java
---------------------
2004/01/24
factor out setting of internationalized fonts into ApplicationFrame
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/01/24
prior to chaning drawing back to use cache
com/pixelmed/displaywave/ECGPanel.java
---------------------
2004/01/24
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
---------------------
2004/01/24
remove redundant size command line arguments, do some javadoc, and make as much private as possible
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/Makefile
---------------------
2004/01/24
formally include scpecg and displaywave
Makefile
---------------------
2004/01/24
tidy up javadoc and scope
ECGViewer.bat
ECGViewer.sh
ECGViewerWithCDJRE.bat
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/package.html
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/scpecg/package.html
---------------------
2004/01/25
ECGViewer batch files and Mac app
COPYRIGHT
Makefile
ECGViewer.app/Contents/Info.plist
ECGViewer.app/Contents/PkgInfo
ECGViewer.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/Resources/GenericJavaApp.icns
---------------------
2004/01/25
Makefile
---------------------
2004/01/25
Makefile
---------------------
2004/01/25
COPYRIGHT
---------------------
2004/01/25
docs/ECGViewer/ReleaseNotes.doc
docs/ECGViewer/ReleaseNotes.pdf
---------------------
2004/01/27
add storage SCU performance tests
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2004/01/27
only read as much as we need when receiving for database insert
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/01/27
add storage SCU performance tests
com/pixelmed/network/Makefile
---------------------
2004/02/04
1.4.2DP1 javadoc/resources/inherit.gif bug fixed in 1.4.2 release
Makefile
---------------------
2004/02/11
add scaling
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
---------------------
2004/02/11
use paths since faster
com/pixelmed/displaywave/ECGPanel.java
---------------------
2004/02/11
use paths since faster
com/pixelmed/displaywave/ECGPanel.java
---------------------
2004/02/11
add text dump capability
com/pixelmed/scpecg/Makefile
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/02/11
experiments with performance and tcp buffer sizes
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2004/02/11
begin experiments with coercion on sending
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/02/11
ECGViewer.app/Contents/Info.plist
---------------------
2004/02/11
draft release notes in response to judging committee requested changes
docs/ECGViewer/ReleaseNotes.doc
docs/ECGViewer/ReleaseNotes.pdf
---------------------
2004/02/22
add tests for all certified samples
com/pixelmed/displaywave/Makefile
---------------------
2004/02/22
flag sense of bimodal compression correctly in tree
com/pixelmed/scpecg/Section5Or6.java
---------------------
2004/02/22
debugging
com/pixelmed/scpecg/HuffmanDecoder.java
---------------------
2004/02/22
ignore bimodalCompressionUsed when checking whether or not to use protected areas, push check for protected areas down to per sample level rather than separate - means same code used for non-high compression decompression
com/pixelmed/scpecg/SCPECG.java
---------------------
2004/02/22
update release notes to account for bug that was failing to add reference beat when bimodal compression was no
docs/ECGViewer/ReleaseNotes.doc
docs/ECGViewer/ReleaseNotes.pdf
---------------------
2004/02/22
add test results for scpecg test files
Makefile
com/pixelmed/scpecg/Makefile
---------------------
2004/02/25
add SOP Classes for draft retired VL so as to be able to display them
com/pixelmed/dicom/SOPClass.java
---------------------
2004/02/25
Fixed [bugs.mrmf] (000099); OW representation of 8 bit images was being unpacked in wrong order; use low part of word first
com/pixelmed/display/SourceImage.java
---------------------
2004/03/23
javadoc fix
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2004/03/23
add UID generation capability
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/VersionAndConstants.java
---------------------
2004/03/23
add put() that fins its own tag
com/pixelmed/dicom/AttributeList.java
---------------------
2004/03/23
add utility to make DICOM SC image from JPEG etc
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/Makefile
---------------------
2004/03/24
only substitute OB for OW if attribute is Pixel Data (encountered this with implicit VR palette color image wuerlim/us2.dcm wrt. lookup table data attributes)
com/pixelmed/dicom/AttributeFactory.java
---------------------
2004/03/25
Fix [bugs.mrmf] (000102) Palette Color image displays as gray when Largest Pixel Value present
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2004/04/05
add sup 42 MPEG transfer syntax
com/pixelmed/dicom/TransferSyntax.java
---------------------
2004/04/06
CP 380
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/04/06
various dictionary updates for Sup 47 and CPs 392,395,409
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2004/04/06
add sup 47 sop classes
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2004/05/01
fixed [bugs.mrmf] (000106) Integer Strings that exceed size limits cause database insertion failure
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2004/05/01
Fixed [bugs.mrmf] (000108) Spurious wrong data type messages as a consequence of reading past the end of file, by inserting a break rather than looping again unnecessariyl
com/pixelmed/dicom/AttributeList.java
---------------------
2004/05/01
add bulk interchange media import to data base support, using DICOMDIR or recursive directory search
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/Makefile
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/Makefile
---------------------
2004/05/01
add some missing ident strings
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/network/IdentifierHandler.java
---------------------
2004/05/01
more work on media importation, including checking DICOMDIR referenced files, and if necessary the files themselves, for suitable SOP class and transfer syntax, and addition of a loggin mechanism to report back from the importer
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/MessageLogger.java
---------------------
2004/05/02
allow single file as argument, and just return it
com/pixelmed/utils/FileUtilities.java
---------------------
2004/05/02
add file import to local database
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/05/02
work on trying to make status bar not truncate text on updates
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/05/09
speed up addition of nodes by different sort order maintenance
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2004/05/10
database performance monitoring and improvements, particularly using = not LIKE, and adding indices to parents
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
---------------------
2004/05/15
correct usage message typo
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2004/05/15
com/pixelmed/network/performanceTests.sh
---------------------
2004/05/15
com/pixelmed/network/performanceTests.sh
---------------------
2004/05/16
network performance tests
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/performanceTests.sh
---------------------
2004/05/16
before adding multiple file send to SCU performance test
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/performanceTests.sh
---------------------
2004/05/17
performance test SCU support for multiple files
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/performanceTests.sh
---------------------
2004/05/17
setup script to run on g4ely not just helgray, and handle slow kill of scp
com/pixelmed/network/performanceTests.sh
---------------------
2004/05/27
Fix [bugs.mrmf] (000111) Studies in browser not sorted by date but ID, and don't display date
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2004/05/29
com/pixelmed/display/SingleImagePanel.java
---------------------
2004/05/31
add experimental region growing and bi-dimensional measurement tool
com/pixelmed/display/SingleImagePanel.java
---------------------
2004/06/10
Fix [bugs.mrmf] (000113) StorageSCP failing when data followed command in same PDU
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
---------------------
2004/06/10
Fix [bugs.mrmf] (000114) Failing to set last fragment on command when sending command and data in same PDU
com/pixelmed/network/Association.java
com/pixelmed/network/FindSOPClassSCU.java
---------------------
2004/06/16
add releaseall target
Makefile
---------------------
2004/07/10
tidy up extracting real world value mappings and their equivalents, including from per-frame and shared pixel value transformation sequences; fixes [bugs.mrmf] (000103) For MF CT, com.pixelmed.dicom.RealWorldValueTransform.java does not check Pixel Value Transformation to get HUs
com/pixelmed/dicom/RealWorldValueTransform.java
---------------------
2004/07/18
turn of native JIS message now that Sun has fixed bug
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2004/07/18
use hex group element when tag not in dictionary for element name (else was throwing exception on creating node)
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2004/07/18
more work on CT multiframe
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/Makefile
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/07/18
correct VR for FilterMaterial to CS per CP 187
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2004/08/01
Fix incorrectly spelled TableFeedPerRotation
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/08/01
Add requirement for EnhancedContrastBolusModule if ContrastBolusAgentSequence present
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/08/01
tidy up defined terms and enumerated values for some type 2s, and make ContrastBolusUsageSequence VM 1-n
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/08/01
only check defined terms and enumerated values if a value is present, since type 2's may have no value, and the XML representation has no value element at all rather than a zero length value
com/pixelmed/validate/CompileDicomIODDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/08/01
require ContrastBolusAgentPhase only if ContrastBolusAgentNumber matches (for first 3 agents and assuming same order in ContrastBolusUsageSequence and ContrastBolusAgentSequence)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/08/07
fix encapsulation decompression and add support for JPEG; JPEG 2000 now works
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2004/08/07
add provisional support for jpeg lossless and jpeg-ls using JAI JIIO codecs
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2004/08/09
finish up JPEG-related JIIO codec stuff, including JPEG Extended, and skipping properly if unrecognized Transfer Syntax
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2004/08/10
Fix [bugs.mrmf] (000129) by using TreeSet rather than ArrayList then sorting after each addition for directory records; dramatically faster for large DICOMDIRs
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
---------------------
2004/08/10
switch to TreeSet from ArrayList introduced uniqueness constraint; need to check compareTo() is comparing against same record type when doing integer comparison, else use string compare of full name including directory record type; else concatenations and images were getting mixed up (e.g., concatentation 1 matched image 1)
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2004/08/11
improve addChild() performance with TreeSet rather than ArrayList with sort; introduces uniqueness constraint
com/pixelmed/dicom/AttributeTreeRecord.java
---------------------
2004/08/13
begin work on new event model
Makefile
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/StatusChangable.java(DEAD)
com/pixelmed/display/event/StatusChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/StatusChangeListener.java(DEAD)
com/pixelmed/display/event/WindowCenterAndWidthChangable.java(DEAD)
com/pixelmed/display/event/WindowCenterAndWidthChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeListener.java(DEAD)
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
---------------------
2004/08/13
begin work on new event model
com/pixelmed/event/Makefile
---------------------
2004/08/14
more more on ned event model - frame selection and sort order
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/Makefile
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/Makefile
com/pixelmed/event/SelfRegisteringListener.java
---------------------
2004/08/15
more work on events; factor out localizer manager and use new event model for source selection changes
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/SourceImageSelectionChangable.java(DEAD)
com/pixelmed/display/event/SourceImageSelectionChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeListener.java(DEAD)
com/pixelmed/display/event/SourceSpectrumSelectionChangable.java(DEAD)
com/pixelmed/display/event/SourceSpectrumSelectionChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeListener.java(DEAD)
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/Listener.java
---------------------
2004/08/16
new source image selection event mechanism for test applications
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
---------------------
2004/08/18
include JIIO in windows batch files and makefiles
DicomImageViewer.bat
DicomImageViewerWithCDJRE.bat
---------------------
2004/08/21
implement CP 447 to use Enhanced Contrast Bolus/Module for MR, and have validator flag an error when old attributes are present
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/09/05
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
---------------------
2004/09/05
apply new event mechanism to VOI function selection
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangable.java(DEAD)
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangeEvent.java(DEAD)
com/pixelmed/display/event/SingleImagePanelVOILUTSelectionChangeListener.java(DEAD)
com/pixelmed/display/event/VOIFunctionChangeEvent.java
---------------------
2004/09/05
apply new event mechanism to region selection
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/RegionSelectionChangable.java(DEAD)
com/pixelmed/display/event/RegionSelectionChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeListener.java(DEAD)
---------------------
2004/09/05
apply new event mechanism to browser panel change
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/09/05
apply new event mechanism to browser panel change
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/event/BrowserPaneChangable.java(DEAD)
com/pixelmed/display/event/BrowserPaneChangableDefaultImplementation.java(DEAD)
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeListener.java(DEAD)
com/pixelmed/display/event/Makefile
---------------------
2004/09/06
remove some listener leak - add omitted listeners to deconstruct() methods
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SpectraPanel.java
---------------------
2004/09/07
do not complain about missing ContrastBolusAgent when checking for unwanted (old) Contrast Bolus Module
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/09/07
make database file name and saved image folders properties (with defaults), and try saved image folder as it stands before trying it in home folder (in case an absolute path)
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/09/07
com/pixelmed/event/ApplicationEventDispatcher.java
---------------------
2004/09/08
remap currentSourceIndex through currentSourceSortOrder for attribute table browser on frame selection change
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/09/08
Fix [bugs.mrmf] (000131) DICOMDIR tree not separating studies (etc) with same string name but different UIDs
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2004/09/08
fix revised directory record comparison to separate instances using correct UID
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2004/09/08
cache uid
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2004/09/08
cache integer and string values during construction of directory records
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2004/09/08
do not check for empty UIDs in directory record comparison; should never happen and slows things down
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2004/09/08
only perform comparisons if required
com/pixelmed/dicom/DicomDirectoryRecord.java
---------------------
2004/09/08
turn off dicom directory timing messages
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/09/17
fix incorrect VR for ImageComments
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/09/21
give ctmf test more memory
com/pixelmed/display/Makefile
---------------------
2004/09/21
study the impact of using DataBufferShort (unsuccessfully, since lookup op for windowing fails); whilst at it, fix windowing to return byte (not short) sized buffered image
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2004/09/27
update data dictionary for recent CPs and to correct a VR
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2004/09/30
tidy up some javadoc
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/scpecg/SectionHeader.java
---------------------
2004/10/14
elaborate on metaheader use when copying
com/pixelmed/dicom/DicomStreamCopier.java
---------------------
2004/10/14
make sure class files and pixelmed.jar not included in source release
Makefile
---------------------
2004/10/14
do not write if null or zero length values (fix for [bugs.mrmf] (000137) Exception when writing zero length OW attribute)
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
---------------------
2004/10/16
when validating check for likely incorrect zero values
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/16
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2004/10/16
add enhanced CT to descriptions
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2004/10/16
more checks for unlikely values of 0, and cross-check Image and Frame Type and VolumeBasedCalculationTechnique values
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/17
handle pixel padding values for signed images with -ve rescale intercept (i.e. use most -ve, not zero)
com/pixelmed/display/SourceImage.java
---------------------
2004/10/21
check for CONSTANT_ANGLE when FrameType value 3 is LOCALIZER
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/24
add dump cvs log script
dumpcvslog.sh
---------------------
2004/10/24
fix condition on CTReconstructionMacro to check if present regardless if required
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/24
check for ReconstructionAngle of zero
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/24
check ReconstructionAngle against AcquisitionType
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/29
check for consistency between SpiralPitchFactor, TableFeedPerRotation and TotalCollimationWidth
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/30
round() rather thasn floor() for SpiralPitchFactor check
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/30
reduce precision of SpiralPitchFactor to 2 decimal places, and do not repeat test if both CTAcquisitionDetailsSequence and CTTableDynamicsSequence are in a shared functional group
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/30
improve ReconstructionAngle checks against AcquisitionType of CONSTANT_ANGLE when CTAcquisitionTypeSequence is per frame and CTReconstructionSequence is not
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2004/10/30
do not be quite so fussy about unit vectors
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2004/10/31
Fix [bugs.mrmf] (000070) Localizer/spectra background sometimes doesn't load on selection, or reselection
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/11/01
dumpcvslog.sh
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2004/11/05
update to support hsqldb 1.7.2 (which has pre-existing tables when creating new database (Fixes [bugs.mrmf] (000141))
hsqldb.jar
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/dicom/InformationEntity.java
---------------------
2004/11/05
forgot to update README for hsqldb 1.7.2
README
---------------------
2004/11/11
whilst creating INSERT statement, do not add the same attribute/value twice to the same table (fixes [bugs.mrmf] (000144))
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/11/11
AssociationFactory should be public not package scope
com/pixelmed/network/AssociationFactory.java
---------------------
2004/11/11
add abort() method to Association (fixes [bugs.mrmf] (000145)), and also make release() wait for ARTIM if it aborts for unrecognized PDU in response to A-RELEASE-RQ
com/pixelmed/network/Association.java
---------------------
2004/11/11
add abort() method to Association (fixes [bugs.mrmf] (000145)), and also make release() wait for ARTIM if it aborts for unrecognized PDU in response to A-RELEASE-RQ
com/pixelmed/network/Association.java
---------------------
2004/11/11
make PresentationContext public to support Associationfactory being public
com/pixelmed/network/PresentationContext.java
---------------------
2004/11/11
tidy up javadoc
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
---------------------
2004/11/16
spell fluoroscopy correctly in validator :)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2004/11/16
add new database information model that matches on more than just UID
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/Makefile
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
---------------------
2004/11/19
factor out call to set internationalized fonts and make sure it is called by DicomImageViewer.createGUI() (it was not being called, since earlier refactoring)
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2004/12/10
do not do anything with values that equal pixel padding value if signed photometric representation (fixes [bugs.mrmf] (000152) Zero pixel padding values for signed MR images with no real -ve values shown too black
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2004/12/10
changes paths from absolute to relative, and and cycle through all mfct and mfmr image display
com/pixelmed/display/Makefile
---------------------
2004/12/13
separate slice thickness from voxel spacing array, and derive slice interval from volume if volume and use slice thickness not voxel spacing third value for localizers - fixes [bugs.mrmf] (000156) geometry from attribute lists is using slice thickness not reconstruction interval as third value of voxel spacing
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
---------------------
2004/12/13
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2004/12/19
describe removal of pixel padding value from MR images
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2004/12/20
factor out window center/width code into separate class, and build test main routine
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2004/12/21
experiment with show demographic and technique annotations
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TextAnnotationPositioned.java
---------------------
2004/12/22
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2004/12/23
correct velocity encoding scaling for PCHEART
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2004/12/27
work on orientation annotations
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2004/12/27
separate class for adding orientation annotation; look for patient orientation if no geometry
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/01/02
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/01/02
more work on displaying annotations
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/01/03
add orientation annotations to reference frame, and factor out font characteristics to caller
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/01/03
more work on annotations
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2005/01/04
add palette color photometric interpretation support
com/pixelmed/display/SourceImage.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/01/04
parameterize font and color for demographicAndTechniqueAnnotations
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/01/04
make class public
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2005/01/04
make class public
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/TextAnnotationPositioned.java
---------------------
2005/01/05
recognize illegal explicit OB with > 8 bits allocated and make OW
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
---------------------
2005/01/06
add photometric interpretation to annotations
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2005/01/07
first effort at WADO support
com/pixelmed/web/package.html
---------------------
2005/01/07
first effort at WADO support
Makefile
com/pixelmed/web/HttpServer.java
com/pixelmed/web/Makefile
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/package.html
---------------------
2005/01/08
factor out generic web request from wado request
com/pixelmed/web/HttpServer.java
com/pixelmed/web/Makefile
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
---------------------
2005/01/08
factor out image and file creation into separate methods; use statistical default if no window; allow window to be specified on command line or as paramaters to methods
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2005/01/08
provide method to find records of an information entity by instance UID
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
---------------------
2005/01/08
add jpeg support to WADO and factor out header and body response method
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoServer.java
---------------------
2005/01/08
com/pixelmed/web/Makefile
---------------------
2005/01/08
for web, add stylesheet and patient, study and series request types
Makefile
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/stylesheet.css
---------------------
2005/01/08
send displayed image to named window
com/pixelmed/web/WadoServer.java
com/pixelmed/web/stylesheet.css
---------------------
2005/01/09
factor out buffered image utilities for color band conversion and resampling
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2005/01/09
com/pixelmed/web/WadoServer.java
---------------------
2005/01/09
wado needs vector math for annotations
com/pixelmed/web/Makefile
---------------------
2005/01/09
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2005/01/15
Fix [bugs.mrmf] (000167) images with (illegal) empty image position or orientation attributes throw exception
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
---------------------
2005/01/15
web server color, cache and keep connection alive experiments
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/SourceImage.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/WadoServer.java
---------------------
2005/01/19
add WindowCenterWidthExplanation and defined terms to validator
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2005/01/19
clean up for CT MF release
com/pixelmed/web/package.html
---------------------
2005/01/19
clean up for CT MF release
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SourceImage.java
com/pixelmed/web/package.html
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/01/19
temporarily add test page so as not to loose experiment
com/pixelmed/web/testpage.html
---------------------
2005/01/21
Implement CP 379 k-space filtering in images as well as spectroscopy objects
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2005/01/21
always use attribute tags in tree, rather than name alone when known, and always sort by tag number
com/pixelmed/dicom/AttributeTreeRecord.java
---------------------
2005/01/21
make more robust in the face of incorrect encoding of per-frame functional group sequences and tolerates the presence of private creator attributes (that are not SQ VR) in functional group items
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/01/22
insert periods between components in generated UIDs, add check for length, add timing main method
com/pixelmed/dicom/UIDGenerator.java
---------------------
2005/01/22
extend UID generation and include MAC address
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/Makefile
---------------------
2005/01/22
extend UID generation and include MAC address
com/pixelmed/utils/MACAddress.java
---------------------
2005/01/22
generalize MAC address extraction to match regex
com/pixelmed/utils/MACAddress.java
---------------------
2005/01/22
factor out command searching
com/pixelmed/utils/MACAddress.java
---------------------
2005/01/22
generalize mac address to include solaris and windoze
com/pixelmed/utils/MACAddress.java
---------------------
2005/01/23
factor out threads to comsume spawned process output; more unsuccessfuly experiments with windows ipconfig
com/pixelmed/utils/MACAddress.java
---------------------
2005/01/23
use java.rmi.dgc.VMID instead of Mac address if unique
com/pixelmed/dicom/UIDGenerator.java
---------------------
2005/01/23
com/pixelmed/utils/MACAddress.java
---------------------
2005/01/26
Fix 000168 per-frame different window values no longer work
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/01/26
add feature (000084) Double-click in DICOMDIR (or other browser) should load image
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/01/27
com/pixelmed/web/WadoServer.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/01/27
target image window by name on load; load initial blank then with explcit script rather than onerror
com/pixelmed/web/testpage.html
---------------------
2005/01/27
add image display page using HTML template with population of UID array from database
Makefile
com/pixelmed/utils/FileUtilities.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/testpage.html(DEAD)
---------------------
2005/01/27
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/WadoServer.java
---------------------
2005/01/27
add ability to specify quality and progressive
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2005/01/27
add windowing support to wado server
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/WadoServer.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/01/28
factor out utilities class for web server
com/pixelmed/web/Makefile
com/pixelmed/web/Utilities.java
com/pixelmed/web/WadoServer.java
---------------------
2005/01/28
refactor wado server into request type server and separate handlers
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/Makefile
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequestHandler.java
---------------------
2005/01/28
cull wado server down to just wado, and use refactored request handler; clean up imports
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/Makefile
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/Utilities.java(DEAD)
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
---------------------
2005/01/31
reduce scroll divisor
com/pixelmed/web/ImageDisplayTemplate.tpl
---------------------
2005/01/31
com/pixelmed/web/ImageDisplayRequestHandler.java
---------------------
2005/01/31
add primitive sort by numeric instance number
com/pixelmed/web/ImageDisplayRequestHandler.java
---------------------
2005/01/31
make window changes cummulative across mouse ups
com/pixelmed/web/ImageDisplayTemplate.tpl
---------------------
2005/01/31
com/pixelmed/web/RequestTypeServer.java
---------------------
2005/01/31
add command line arguments to request type server
com/pixelmed/web/Makefile
com/pixelmed/web/RequestTypeServer.java
---------------------
2005/02/01
share cache between workers
com/pixelmed/web/WadoRequestHandler.java
---------------------
2005/02/01
flush and close output after writing (else may get used before finished)
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2005/02/02
add batch file to start server on windows
com/pixelmed/web/server.bat
---------------------
2005/02/02
add support for WADO image size and quality parameters; deal with resizing color images by converting to and from most favorable color model and back to something JPEG coder will handle; factor out most favorable color model choice, don't fail when headless and mimic Mac choice when headless; clean up description of buffered images; set request column size to 512 to resolve annotation font size problems if not actually 512 (000170)
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/WadoRequestHandler.java
---------------------
2005/02/02
more work on favorable image type conversions for non-Mac platforms
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2005/02/04
Improve database performance for web viewer by adding SOPInstanceUID table index (and others) (000174)
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
---------------------
2005/02/04
make getMostFavorableColorModel() public rather than private; could have been package scope, but perhaps generally useful
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2005/02/04
add web debugging level
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
---------------------
2005/02/05
make source image construction more tolerant of missing attributes or values in DICOM or DICOM-like images
com/pixelmed/display/SourceImage.java
---------------------
2005/02/08
com/pixelmed/web/RequestTypeServer.java
---------------------
2005/02/08
add support for returning favicon.ico, and distinguish text from binary returned file types
Makefile
com/pixelmed/web/HttpServer.java
com/pixelmed/web/Makefile
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/RequestHandler.java
---------------------
2005/02/08
com/pixelmed/web/Makefile
---------------------
2005/02/09
add support for returning favicon.ico, and distinguish text from binary returned file types
com/pixelmed/web/favicon.ico
com/pixelmed/web/favicon.ill
com/pixelmed/web/favicon.png
---------------------
2005/02/09
case insensitivity to support media reading on platforms that map to lower case
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/utils/FileUtilities.java
---------------------
2005/02/12
add annotations parameter
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/web/WadoRequestHandler.java
---------------------
2005/02/13
correct example of wado request to properly escape all reserved characters in paramater, not just =
com/pixelmed/web/WadoRequest.java
---------------------
2005/02/15
add test for ConsumerFormatImageMaker
com/pixelmed/display/Makefile
---------------------
2005/02/21
remove more attributes during blinding - specifically Detached Study Mx attributes seen in Philips CT
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2005/02/25
use methods for extracting attribute values that are robust in the face of zero length values, especially since the values need to be cached only for pixel data, and the attribute list is used for other things - fixes (000178) Exception on encountering query response with zero length Number of Frames
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
---------------------
2005/02/26
fixes (000178) Exception on encountering query response with zero length Number of Frames
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/02/26
Recognize that image description stuff is extracted from Greg Guerin's ImageTrials
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2005/03/02
make sure browsers (query, database, dicomdir) show all records even if string values same
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/query/QueryTreeRecord.java
---------------------
2005/03/05
add support for multiple dimension organizations
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
---------------------
2005/03/05
allow contrast bolus usage to be shared functional group (CP 503)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2005/03/05
allow filter material to be MIXED for enhanced CT (CP 515)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/03/05
allow US rescale type for localizers (CP 519)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2005/03/06
release notes for 2005/03/06 NEMA release
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/04/05
Fix validator (000179) Wrong VR for Tag Spacing Second Dimension (CP 379)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/09
fix sample properties file to add query model for default query AE
sample.com.pixelmed.display.DicomImageViewer.properties
---------------------
2005/04/09
add example of command line IO redirection to windows batch file
DicomImageViewer.bat
---------------------
2005/04/09
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/14
Fix [bugs.mrmf] (000182) Out of memory error on C-STORE to Philips EasyVision - zero PDU length
com/pixelmed/network/AssociationOutputStream.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/14
More verbose descriptions at series and image levels in remote query tree browser
com/pixelmed/query/StudyRootQueryInformationModel.java
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/14
include Patient and Study labels in study root tree browser
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2005/04/17
Fix (000184) Validator should give warning or error not nothing when unrecognized SOP Class
com/pixelmed/validate/CompileDicomIODDescriptionsIntoXSLT.xsl
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/29
Fix (000186) MR Spectroscopy Frame Type Sequence not allowed in shared functional group
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/29
Fix (000187) Validator does not check Raw Data IOD
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/04/30
update data dictionary to latest, including correct tag value of Parallel Reduction Factor In-plane (CP 319)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2005/05/02
fix typo in windows validator command line
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2005/05/07
Fix [bugs.mrmf] (000188) Deidentifier does not remove Dataset Trailing Padding
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2005/05/15
fix typo in command line validator invocation
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2005/05/15
Fix (000189) Validator error in Diffusion Gradient Direction Sequence
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/05/18
Fix (000190) Private Dimension Index Pointers not being listed in list of dimensions
com/pixelmed/display/SourceInstanceSortOrderPanel.java
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/05/21
Fix (000191) Validator does not check file meta information
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/ReleaseNotes.doc
---------------------
2005/05/21
Fix (for attributes in IOD only) (000183) Validator does not detect illegal character for VR or too long for VR
com/pixelmed/validate/CommonDicomIODValidationRules.xsl
com/pixelmed/validate/CompileDicomIODDescriptionsIntoXSLT.xsl
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/05/21
do not check characters in LT, ST or UT since may be control characters and don't know how to do that
com/pixelmed/validate/CommonDicomIODValidationRules.xsl
---------------------
2005/05/22
update release notes to reflect VR and DICOMDIR related MR object fixes
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/06/01
detect when pdvLength < 2 and throw specific exception (fixes 000193)
com/pixelmed/network/PresentationDataValue.java
---------------------
2005/06/01
detect when pdvLength < 2 and throw specific exception (fixes 000193)
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationDataValue.java
---------------------
2005/06/10
Add buttons to select sorting of attribute tree by either number or name (000194)
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/display/DicomImageViewer.java
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2005/06/10
make attributes without names always sort after those with name
com/pixelmed/dicom/AttributeTreeRecord.java
---------------------
2005/06/18
COPYRIGHT
COPYRIGHT
com/pixelmed/dicom/Makefile
---------------------
2005/06/18
begin work on framesets
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/SetOfFrameSets.java
---------------------
2005/06/28
Add Lossy Image Compression Method (CP 400 and CP 498); VOI LUT Function (CP 467)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2005/06/28
factor out DIMSE command numbers into separate class
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2005/07/04
add method to compare hierarchically information entities 9to help qith query SCP)
com/pixelmed/dicom/InformationEntity.java
---------------------
2005/07/04
add query SOP Classes
com/pixelmed/dicom/SOPClass.java
---------------------
2005/07/04
include name of attribute from dictionary if present in toString() dumps of attributes and lists
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2005/07/04
begin work on query SCP support
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/Makefile
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/query/Makefile
com/pixelmed/query/QueryResponseGenerator.java
---------------------
2005/07/04
tidy up query message debugging
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2005/07/05
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2005/07/05
include lowest level of entity join table in from clause, and make next() behave when no result set if SQL query fails
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2005/07/05
correct handling of unsupported optional keys
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2005/07/05
add support for ModalitiesInStudy
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2005/07/05
factor out common information model parameters for use in modalities in study
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2005/07/05
add support for SOPClassesInStudy and number of study/series related series/instances in query and response
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/07/05
no longer have to handle ModalitiesInStudy specially, since now in dictionary with InformationEntity.STUDY
com/pixelmed/query/QueryInformationModel.java
---------------------
2005/07/06
extend query model with IHE Query Images keys (except for sequences)
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/07/06
add utility to rebuild database files
com/pixelmed/database/Makefile
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
---------------------
2005/07/06
flesh out methods for adding values to various numeric binary attribute types, including parsing numbers from string
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2005/07/07
more cleaning up of column name determination from dicom tag
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2005/07/07
add derived date/time attributes with SQL type TIMESTAMP to prepare for query with date and time range matching
hsqldb.jar
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2005/07/07
change to use of hsqldb 1.8.0.0
README
hsqldb.jar
---------------------
2005/07/07
update to version 1.6 of Sun Java XML pack, which includes using standard serialization method (which indents less impressively :()
Makefile
README
dom.jar
jaxp-api.jar
sax.jar
xalan.jar
xercesImpl.jar
xsltc.jar(DEAD)
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2005/07/07
take Modalities in Study out of database dictionary - never filled in and inhibits query
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
---------------------
2005/07/08
allow viewer to start cleanly even in absence of all but pixelmed.jar file
DicomImageViewerMinimal.bat
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/Makefile
com/pixelmed/geometry/LocalizerPosterFactory.java
---------------------
2005/07/08
check only in table, not IE, in order to allow instamce number to be returned, and also check for null columnName, to allow private and other unknown attributes to be ignored gracefully
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2005/07/08
tidy up methods to handle child IE in face of concatenations
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
---------------------
2005/07/11
every keystroke updates query identifier attributes - do not need to have return for changes to be recorded
com/pixelmed/query/FilterPanel.java
---------------------
2005/07/11
every keystroke updates query identifier attributes - do not need to have return for changes to be recorded
com/pixelmed/query/FilterPanel.java
docs/DicomImageViewer/UserManual.doc
---------------------
2005/07/18
take care not to replace characters in original attribute string whilst escaping, but in copy
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2005/07/25
dumpcvslog.sh
---------------------
2005/07/25
add support for date time range matching
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/Makefile
---------------------
2005/07/26
work on canonical and phonetic matching of person names during query
DicomImageViewer.bat
DicomImageViewer.sh
DicomImageViewerMinimal.bat
DicomImageViewerWithCDJRE.bat
README
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/Makefile
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/display/Makefile
com/pixelmed/utils/StringUtilities.java
---------------------
2005/07/27
handle correct length of string when removing leading spaces (offset is not zero)
com/pixelmed/dicom/PersonNameAttribute.java
---------------------
2005/07/27
exclude CVS folders when searching for files to rebuild database
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
---------------------
2005/07/27
defer population of children in database tree records until needed, specifically when selected or expanded (only does one level down on getChildCount() to indicate expansion is possible; fully populates on selection in order to build file list for load
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2005/07/27
defer population of children in database tree records until needed, specifically when selected or expanded (only does one level down on getChildCount() to indicate expansion is possible; fully populates on selection in order to build file list for load
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2005/07/28
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2005/07/28
only perform lower level queries when expanding tree
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
---------------------
2005/07/28
use patient name as well as ID for unique entry in database
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
---------------------
2005/07/28
fix removal of wild cards at end of family name, and improve embedded wild card handling in phonetic name
com/pixelmed/dicom/PersonNameAttribute.java
---------------------
2005/07/28
extend person name query to match on any of the literal, canonical and phonetic equivalents simultaneously, as well as permuted family and given name components
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/dicom/PersonNameAttribute.java
---------------------
2005/07/28
update release string
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/07/30
have date and time range matching handle unrecognized attributes based on their VR alone rather than trying to combine
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2005/07/30
make sure to null buffers when command or data have been used, else accummulates
com/pixelmed/network/CompositeResponseHandler.java
---------------------
2005/08/05
add more patient related attributes to remove (from detached patient mx modules)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2005/08/05
add more patient related attributes to remove (from detached patient mx modules)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2005/08/20
factor out construction of list of presentation contexts
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2005/08/20
factor out check for bzip2 availability into presentation context list factory, and add method to build presentation contexts for multiple files
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2005/08/20
implement multiple file send in storage SCU and retrieve in storage SCP, as well as allow retrieve to one self (or multiple simultaneous receipt of same sop instance) by using temporary file copy
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/query/Makefile
com/pixelmed/query/RetrieveResponseGenerator.java
---------------------
2005/08/20
implement multiple file send in storage SCU and retrieve in storage SCP, as well as allow retrieve to one self (or multiple simultaneous receipt of same sop instance) by using temporary file copy
com/pixelmed/network/MoveSOPClassSCU.java
---------------------
2005/08/21
commons-codec-1.3.jar
---------------------
2005/08/21
switch to UTF-8 encoding of source file
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2005/08/21
handle additional complications of upgrading to jaxp 1.3 in jwdp 1.6 related to not having direct access to Xalan in Apache classes; this includes using XSLTC and translets; have not been able to get translets to actually work in pixelmed.jar file in place of XSLT in runtime though
DicomImageViewer.bat
DicomImageViewer.sh
DicomImageViewerMinimal.bat
DicomImageViewerWithCDJRE.bat
Makefile
com/pixelmed/display/Makefile
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/validate/Makefile
---------------------
2005/08/21
add signing of xmlpack jar file to Makefile; without this XSLTC will fail
Makefile
---------------------
2005/08/29
add Mac app generation to Makefile
Makefile
---------------------
2005/08/29
handle NULL matching in database using IS NULL rather than = (prevents every instance from patient with missing ID or name creating new patient record
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
---------------------
2005/08/29
add routine to support handle NULL matching in database using IS NULL rather than =, as well as adding user fields to database create
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2005/08/29
add lossy compression related fields to database model
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
---------------------
2005/09/02
fix error in null matching
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
---------------------
2005/09/06
fix class detection for bzip2 codec presence
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2005/09/06
was failing to set value length when adding values, string dump was not working when invoked from AttributeList, added convenience method to add value from AttributeTag directly rather than separate group and element
com/pixelmed/dicom/AttributeTagAttribute.java
---------------------
2005/09/06
add convenience method to dump any command or response as an AttributeList
com/pixelmed/network/CompositeResponseHandler.java
---------------------
2005/09/06
detect failure on C-MOVE due to bad request identifier and build an appropriate response, including a list of offending elements
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/query/RetrieveResponseGenerator.java
---------------------
2005/09/06
fix making DicomImageViewer.app
Makefile
---------------------
2005/09/06
correct use of class loader when checking for bzip2 presence
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2005/09/06
add specific error status for unrecognized move destination
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2005/09/07
add capability to release association from SCP/acceptor side - and do not use it for anything yet
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2005/09/07
use C-MOVE rather than C-FIND response command code !
com/pixelmed/network/CMoveResponseCommandMessage.java
---------------------
2005/09/07
give associations numbers and include them in debugging output to distinguish activity om multiple simultaneous associations
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2005/09/08
add commons jar file for web server
com/pixelmed/web/Makefile
com/pixelmed/web/server.bat
---------------------
2005/09/08
add default index.html file for web server
Makefile
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/RequestTypeServer.java
---------------------
2005/09/08
tidy up javadoc
Makefile
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/web/RequestTypeServer.java
---------------------
2005/09/08
factor out creation of temporary file names, and use only characters that work on windoze
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/utils/FileUtilities.java
---------------------
2005/09/13
add support for ophthalmology image objects
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/TagFromName.java
---------------------
2005/09/13
add our own lossy compression detection (including derived database column)
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TransferSyntax.java
---------------------
2005/09/14
if cannot get images (e.g. unsupported compressed transfer syntax), do not try to build image panel and hence throw null pointer exceptions
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/09/14
suppress progress messages and tidy up exception handling for encapsulated images
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2005/09/14
add support from removing post-EOI-maker padding to allow jpeg codec to handle multi-frame encapsulated data
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2005/09/15
add our own lossy compression detection
com/pixelmed/dicom/LossyImageCompression.java
---------------------
2005/09/15
add default index.html file for web server
com/pixelmed/web/index.html
---------------------
2005/09/15
start dealing with difference between standard and codecLib JIIO JPEG readers with respect to multiple images
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2005/09/16
fix decimal offset, add method to dump with offset from buffer start
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/utils/HexDump.java
---------------------
2005/09/16
finish fixing multiframe encapsulated reader to handle JAI IIO codecs that don't know about multiple images; no longer need to treat JPEG standard versus codecLib readers differently and works for all codecs and JPEG transfer syntaxes
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2005/09/19
add lossy image compression description to display annotation
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2005/09/22
factor out handling of network application related properties, and add query model to application entity map
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2005/09/22
refactor property handling and add combined dicom/web server package and class
Makefile
com/pixelmed/database/Makefile
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/Makefile
com/pixelmed/server/package.html
com/pixelmed/server/test.properties
com/pixelmed/utils/FileUtilities.java
com/pixelmed/web/Makefile
com/pixelmed/web/RequestTypeServer.java
---------------------
2005/09/22
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/server/test.properties
---------------------
2005/09/22
com/pixelmed/server/test.properties
---------------------
2005/09/23
update conformance statement to describe qr scp
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
---------------------
2005/09/23
update package description to mention that q/r will one day be factored out of storage scp
com/pixelmed/network/package.html
---------------------
2005/09/25
tidy up some documentation
README
dumpcvslog.sh
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoServer.java
---------------------
2005/09/25
add lossy compression method attribute to query SCU and SCP and database models
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/StudyRootQueryInformationModel.java
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
---------------------
2005/09/25
add dependency tar file to release
Makefile
---------------------
2005/09/26
factor out string used for query model into constant from property handler
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2005/09/26
add arrays of SOP Classes in different categories
com/pixelmed/dicom/SOPClass.java
---------------------
2005/09/26
tidy up javadoc
com/pixelmed/event/EventDispatcher.java
com/pixelmed/utils/MessageLogger.java
---------------------
2005/09/26
tidy up javadoc
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/network/Makefile
com/pixelmed/utils/MessageLogger.java
---------------------
2005/09/26
add all query/retrieve SOP Classes and tidy up javadoc
com/pixelmed/dicom/SOPClass.java
---------------------
2005/09/26
add network probe capability
com/pixelmed/network/Makefile
com/pixelmed/network/ProbeCapability.java
---------------------
2005/09/27
new paths for test images
com/pixelmed/displaywave/Makefile
com/pixelmed/scpecg/Makefile
---------------------
2005/09/27
better exception description when remoteae properties malformed
com/pixelmed/network/NetworkApplicationProperties.java
---------------------
2005/09/27
factor out skipInsistently into BinaryInputStream, and make sure that we use it everywhere (EncapsulatedInputStream was not doing this whilst skipping initial frame offset table, and was working on mac and failing on windows with Harvey MF91)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
---------------------
2005/09/28
Fix [bugs.mrmf] (000196) ImageToDicom System.exit(0)s on exception in constructor
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/UIDGenerator.java
---------------------
2005/09/28
use singleton pattern for ApplicationEventDispatcher as suggested by Chris Beckey ([bugs.mrmf] (000185))
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/SelfRegisteringListener.java
---------------------
2005/09/28
stop removing test.properties on clean :)
com/pixelmed/server/Makefile
---------------------
2005/09/29
factor out AE description into separate class, and begin adding LDAP query support
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkConfiguration.java
---------------------
2005/09/30
experiments with using empty root DN and searching for dicomConfigurationRDN
com/pixelmed/network/NetworkConfiguration.java
---------------------
2005/09/30
forgot to add this file
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/network/NetworkConfiguration.java
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2005/10/01
add some null pointer checking to help debug manuela's problem
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/SelfRegisteringListener.java
---------------------
2005/10/01
tidy up parsinf of tree
com/pixelmed/network/NetworkConfiguration.java
---------------------
2005/10/01
add mechanism to extra network properties into LDIF files for loading into LDAP, and factor out information about remote devices from local properties
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2005/10/01
add transfer monitoring
Makefile
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/transfermonitor/Makefile
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
---------------------
2005/10/04
check avoids occasional ArrayIndexOutOfBoundsException exception when looking up pixel values from cursor position
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/10/04
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/10/15
get network information from LDAP network configuration
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkConfiguration.java
---------------------
2005/10/15
add support for extracting VOI LUTs
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/10/16
make Message ID in request commands increment sequentially
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/RequestCommandMessage.java
---------------------
2005/10/16
factor out method to make presentation context list from set of SOP Class UIDs
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2005/10/16
change data set type for identifier from 0001 to 0102 as per note in standard
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
---------------------
2005/10/16
add SOP Class UIDs and DIMSE messages to support C-GET
com/pixelmed/dicom/SOPClass.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/ProbeCapability.java
---------------------
2005/10/16
Greater control over transfer syntaxes proposed in presentation contexts (choice by us, them and as encoded), and exception when too many presentation contexts
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2005/10/16
Fix javadoc
com/pixelmed/network/MoveSOPClassSCU.java
---------------------
2005/10/16
fix initialization of set of storage SOP classes, and rename lists to arrays
com/pixelmed/dicom/SOPClass.java
com/pixelmed/network/ProbeCapability.java
---------------------
2005/10/16
start work on C-GET
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/Makefile
---------------------
2005/10/16
get and move independent retrieve sop class model methods
com/pixelmed/dicom/SOPClass.java
---------------------
2005/10/16
First working version of C-GET SCU and SCP
com/pixelmed/network/Association.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2005/10/16
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2005/10/21
add SCU/SCP Role Selection User Information Sub-Item to association negotiation and acceptance to support C-GET
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/Makefile
com/pixelmed/network/SCUSCPRoleSelection.java
---------------------
2005/10/21
com/pixelmed/display/DicomImageViewer.java
---------------------
2005/10/21
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2005/10/22
Updated conformance statement, add documents to release, and minor document cleanup
Makefile
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
---------------------
2005/10/24
start work on Bonjour
Makefile
README
jmdns.jar
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkConfigurationDynamic.java
---------------------
2005/10/25
DNS self discovery working, dumps table of known devices at intervals, registers self; requires increasing QUERY_WAIT_INTERVAL to 1000 in javax.jmdns.DNSConstants for resolver to work
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkConfigurationDynamic.java
---------------------
2005/10/25
update jmdns.jar to solve QUERY_WAIT_INTERVAL problem
README
jmdns.jar
---------------------
2005/10/25
Fix [bugs.mrmf] (000198) GeometryOfSliceFromAttributeList does not compute normals
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/geometry/GeometryOfSlice.java
---------------------
2005/10/25
Fix [bugs.mrmf] (000197) DatabaseTreeRecord does not set parent correctly when adding new node
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2005/10/25
factor our common NetworkConfigurationSource and rename LDAP and mDNS specific classes
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkConfiguration.java(DEAD)
com/pixelmed/network/NetworkConfigurationDynamic.java(DEAD)
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
---------------------
2005/10/25
implement addAll to merge network information
com/pixelmed/network/NetworkApplicationInformation.java
---------------------
2005/10/25
add dynamic federated network configuration to DicomImageViewer and DicomAndWebStorageServer; attempted to advertise web service, but is not working
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/Makefile
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2005/10/27
Fix [bugs.mrmf] (000199) DatabaseTreeModel method removeTreeModelListener uses wrong check against null
com/pixelmed/database/DatabaseTreeModel.java
---------------------
2005/10/27
add jmdns.jar to Windows batch files
DicomImageViewer.bat
DicomImageViewerWithCDJRE.bat
---------------------
2005/10/27
add jmdns.jar to shell file
DicomImageViewer.sh
---------------------
2005/10/27
modify Makefile to add jmdns.jar to Mac app and change build rules to clean and populate jar files proeprly
Makefile
com/pixelmed/network/AssociationFactory.java
---------------------
2005/10/27
Fixed (actually in previous revision with wrong log message) [bugs.mrmf] (000200) Workaround slow socket startup in JRE 1.5 on Windows XP due to sun bug
com/pixelmed/network/AssociationFactory.java
---------------------
2005/10/27
More on [bugs.mrmf] (000200) Workaround slow socket startup in JRE 1.5 on Windows XP due to sun bug
com/pixelmed/network/AssociationFactory.java
---------------------
2005/10/27
silence when cannot contact LDAP server unless debugging
com/pixelmed/network/NetworkConfigurationFromLDAP.java
---------------------
2005/10/27
Turned off fix for ... causes problems - [bugs.mrmf] (000200) Workaround slow socket startup in JRE 1.5 on Windows XP due to sun bug
com/pixelmed/network/AssociationFactory.java
---------------------
2005/10/29
refactor property handling with respect to network constants, and make all port arguments integer (finally !)
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/Makefile
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2005/10/29
use network defaults rather than properties as much as possible
com/pixelmed/server/test.properties
---------------------
2005/10/29
reactivate 1.5 nulling ProxySelector to speed windows socket opening
com/pixelmed/network/AssociationFactory.java
---------------------
2005/10/29
com/pixelmed/network/ApplicationEntityMap.java
---------------------
2005/10/29
deactivate transfer monitor for now
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2005/11/02
Add check to warn for empty AnatomicRegionSequence
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2005/11/03
Fix '[bugs.mrmf] (000201) MAC Address fails on windows', and add main test method for MAC Address
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/Makefile
---------------------
2005/11/04
Actually fix '[bugs.mrmf] (000201) MAC Address fails on windows'
com/pixelmed/utils/MACAddress.java
---------------------
2005/11/09
more network probing experiments
com/pixelmed/network/ProbeCapability.java
com/pixelmed/utils/ByteArray.java
---------------------
2005/11/09
add jmdns stuff to javadoc
Makefile
---------------------
2005/11/09
dumpcvslog.sh
---------------------
2005/11/09
Pass a factory rather than a handler to solve [bugs.mrmf] (000202) Race condition on query and retrieve response generators if simultaneous queries
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/Makefile
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2005/11/12
aggressively pursue closing input files immediately after use, fixes [bugs.mrmf] (000203) Input files are not closed immediately after reading, leaving locks preventing deletion
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoServer.java
---------------------
2005/11/12
com/pixelmed/server/test.properties
---------------------
2005/11/18
dictionary update
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2005/11/18
correct conversion of fixed length sequences from implicit to explicit or vice versa by always making undefined length - fixes [bugs.mrmf] (000204) C-STORE from pixelmed to eFilm causes eFilm server child process to crash
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
---------------------
2005/11/19
cache resized 8 bit image, not just 16 bit image; fixes [bugs.mrmf] (000205) DicomImageViewer: 8bits images slower than 16bits
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/08
don't copy default properties file on viewer startup
com/pixelmed/display/Makefile
---------------------
2005/12/12
[bugs.mrmf] (000206) Pixel value padding values are not always black when window changed
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2005/12/17
experiments with window decoration and resizing application frame to full size without menu bar
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/TestApp.java
---------------------
2005/12/17
turn off scroll panel in TestApp and resize frames to fixed size based on screen size
com/pixelmed/display/Makefile
com/pixelmed/display/TestApp.java
---------------------
2005/12/17
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
---------------------
2005/12/17
include pad value in simple constructors for SingleImagePanel
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
---------------------
2005/12/17
begin experiments with mammo image viewer
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
find mammo test files automatically
com/pixelmed/display/Makefile
---------------------
2005/12/17
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
order and horizontally flip mammograms correctly
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
add vertical flip for mammograms
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
com/pixelmed/display/Makefile
---------------------
2005/12/17
separate windowing event contexts by study date
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
experiments with displayed area selection and downsampling as well as upsampling and selection of area larger than actual image
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/17
add scaling factor to match current and prior mammograms
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
add scaling factor to match current and prior mammograms
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/17
add scaling factor to match current and prior mammograms
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
com/pixelmed/display/Makefile
---------------------
2005/12/17
justify scaled images left or right based on row being A or P; update annotations after flip/rotate; rotate col into row if row not AP
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
---------------------
2005/12/17
invert scale factor for current versus prior
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
invert scale factor for current versus prior
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
compute scale factor for current versus prior based not on just on spacing but spacing multipled by width in pixels
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
invert scale factor for current versus prior
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
com/pixelmed/display/Makefile
---------------------
2005/12/17
com/pixelmed/display/Makefile
---------------------
2005/12/17
com/pixelmed/display/Makefile
---------------------
2005/12/17
com/pixelmed/display/DisplayedAreaSelection.java
---------------------
2005/12/17
make repaint use displayed area selection rather than source image width and height
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/17
make repaint handle justification left or right or center when resized horizontal width is less than actual viewport width, i.e., when height width ratio of image is different from viewport and height establishes the resized size (sic)
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/17
test inverting choice of current versus prior for scaling
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/17
go back to using current study to set scale
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/18
use new test path names for IHE mammo tests
com/pixelmed/display/Makefile
---------------------
2005/12/18
add construct for single frame images that conveys VOI, etc.
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/18
disabling sharing of VOI events between images of same study
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/18
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/18
annotate displayed mammogram with zoom factor and size in patient/on imager of displayed pixel
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/18
add support for two view mammogram hanging and test
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/18
add burned in lut voi test
com/pixelmed/display/Makefile
---------------------
2005/12/18
add pixel padding mammo test
com/pixelmed/display/Makefile
---------------------
2005/12/18
com/pixelmed/display/Makefile
---------------------
2005/12/18
com/pixelmed/display/Makefile
---------------------
2005/12/19
add four view mammo hanging
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/19
detect VOI LUT Function and use it
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
Fix [bugs.mrmf] (000207) Images without meta-information header are flagged as lossy
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2005/12/21
Fix [bugs.mrmf] (000208) SR detection of embedded image references and coordinates does not follow by-reference relationship
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
---------------------
2005/12/21
experiment with other SCOORD Graphic Types than just two point line
com/pixelmed/display/DicomBrowser.java
---------------------
2005/12/21
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
experiment with breast extent detection
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/21
detect vertical bound failure by looking for upper and lower bound crossover
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
justify towards axilla for MLO, etc.
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/21
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/21
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/21
move selection scaling and justification to displayed area selection, and scale using relative sizes
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/22
rewrite make selection fit based on defined display to image pixel spacing
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/22
center non-MLOs
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/23
add mammo specific annotation; show zoom factor on selected side
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/Makefile
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/23
tidy up mammo annotations
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2005/12/23
tidy up mammo annotations
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TextAnnotationPositioned.java
---------------------
2005/12/23
com/pixelmed/display/Makefile
---------------------
2005/12/23
add yes/no text capability; fix looking in nested attributes to use tag equals() not =
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2005/12/23
add mammo annotations for reason, partial views and implant
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2005/12/23
com/pixelmed/display/Makefile
---------------------
2005/12/23
display zoom factor as ratio
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/23
use half the screen for a single view and a landscape monitor
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/23
add support for annotation of multiple code sequence items
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2005/12/23
com/pixelmed/display/Makefile
---------------------
2005/12/24
correct positioning of image relative annotations and graphics to account for selected image area
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/24
add mammo CAD mark specific extensions to SCOORD handling in SRs
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/24
com/pixelmed/display/Makefile
---------------------
2005/12/24
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/25
check SpatialLocationsPreserved before using referenced SOP instance in SourceImageSequence for CAD marks; transform image-relative coordinates before annotating if image has been flipped or rotated
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/26
make scale to fit mode the default if entire image specified; make scale to fit mode fit entire image in available window, rather than the other way around
com/pixelmed/display/DisplayedAreaSelection.java
---------------------
2005/12/26
update cursor tracking to reflect new selection/scaling mechanism
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/26
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/26
add Graphics2D.imageDraw() based resampling method when not doing it ourselves (e.g. for color)
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2005/12/26
tidy up comments; handle exception when no spacing in source image and make fit to window instead
com/pixelmed/display/MammoImageViewer.java
---------------------
2005/12/26
tidy up comments
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/26
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2005/12/26
when not doing own resampling, try source color model before most favourable color model, since the latter fails on Linux
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2005/12/26
add resizing after windowing, in case resizing before failed - should avoid need for resizing draw ever
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/26
tidy up javadoc
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2005/12/27
add javadoc for query and retrieve response generators
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/RetrieveResponseGenerator.java
---------------------
2005/12/28
add default port for conquest server (5678); move list of port numbers into NetworkDefaultValues
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/ProbeCapability.java
---------------------
2005/12/30
com/pixelmed/network/NetworkDefaultValues.java
---------------------
2005/12/30
Fix [bugs.mrmf] (000212) K-PACS fails to connect due to unrecognized AET with pixelmed association acceptor due to trailing nulls not spaces
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/utils/StringUtilities.java
---------------------
2005/12/30
Temporarily workaround until K-PACS fixed - [bugs.mrmf] (000213) K-PACS freaked out by valid unsupported optional keys pending response during C-FIND
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2005/12/30
more debugging messages in association to see what we are sending, not just what we are receiving
com/pixelmed/network/Association.java
---------------------
2005/12/30
begin testing of secure transport with TLS
NOTES
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoServer.java
---------------------
2006/01/01
add support for converting PDF to DICOM image files
Makefile
README
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PDFToDicomImage.java
---------------------
2006/01/01
add support for converting PDF to DICOM image files
14_os_jpedal.jar
---------------------
2006/01/01
refactor make files to use jar files in library and common included location parameters, as well as localize endorsed dirs to just the jwsdp xml stuff (was causing a compile problemwith 1.5)
14_os_jpedal.jar(DEAD)
DicomImageViewer.sh
Makefile
Makefile.common.mk
commons-codec-1.3.jar(DEAD)
dom.jar(DEAD)
excalibur-bzip2-1.0.jar(DEAD)
hsqldb.jar(DEAD)
jaxp-api.jar(DEAD)
jmdns.jar(DEAD)
sax.jar(DEAD)
vecmath1.2-1.14.jar(DEAD)
xalan.jar(DEAD)
xercesImpl.jar(DEAD)
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/display/event/Makefile
com/pixelmed/displaywave/Makefile
com/pixelmed/event/Makefile
com/pixelmed/geometry/Makefile
com/pixelmed/network/Makefile
com/pixelmed/query/Makefile
com/pixelmed/scpecg/Makefile
com/pixelmed/server/Makefile
com/pixelmed/transfermonitor/Makefile
com/pixelmed/utils/Makefile
com/pixelmed/validate/Makefile
com/pixelmed/web/Makefile
lib/additional/14_os_jpedal.jar
lib/additional/commons-codec-1.3.jar
lib/additional/excalibur-bzip2-1.0.jar
lib/additional/hsqldb.jar
lib/additional/jmdns.jar
lib/additional/vecmath1.2-1.14.jar
lib/jwsdp/dom.jar
lib/jwsdp/jaxp-api.jar
lib/jwsdp/sax.jar
lib/jwsdp/xalan.jar
lib/jwsdp/xercesImpl.jar
lib/xmlpack/xmlpack.jar
---------------------
2006/01/01
rename properties so that clean does not keep deleting them
com/pixelmed/server/Makefile
com/pixelmed/server/test.properties(DEAD)
com/pixelmed/server/testserver.properties
---------------------
2006/01/01
add licences for third party software
LICENSES/COPYRIGHT-jai_imageio.txt
LICENSES/excalibur.LICENSE.txt
LICENSES/hsqldb_lic.txt
LICENSES/hypersonic_lic.txt
LICENSES/jpedal.GPL.LICENSE.txt
LICENSES/jwsdp.LICENSE.txt
LICENSES/jwsdp.THIRDPARTYLICENSEREADME.txt
---------------------
2006/01/01
add JAI IIO libraries from 1.1Alpha linux 586 release; and make sure that they are used
Makefile.common.mk
LICENSES/LICENSE-jai_imageio.txt
LICENSES/THIRD-PARTY-LICENSE-README-jai_imageio.txt
lib/additional/clibwrapper_jiio.jar
lib/additional/jai_imageio.jar
---------------------
2006/01/01
automate xmlpack jar signing
Makefile
---------------------
2006/01/01
do not commit xmlpack.jar
lib/xmlpack/xmlpack.jar(DEAD)
---------------------
2006/01/01
update new paths for windows batch files
DicomImageViewer.bat
DicomImageViewerMinimal.bat(DEAD)
DicomImageViewerWithCDJRE.bat
---------------------
2006/01/01
add batch file for windows test of mammo viewer
MammoImageViewer.bat
---------------------
2006/01/01
Makefile
---------------------
2006/01/01
com/pixelmed/dicom/PDFToDicomImage.java
---------------------
2006/01/06
add request type for instances parameter, and sort by study date and series number for web page
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
---------------------
2006/01/06
Add support to invoke Takahiro Katoji's AiViewer open source GPL Java applet to web server
README
com/pixelmed/server/testserver.properties
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/AppletDisplayTemplate.tpl
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/Makefile
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2006/01/12
Fix [bugs.mrmf] (000214) Specific character set supplied for string attribute in constructor is not used
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/utils/StringUtilities.java
---------------------
2006/01/12
restore simple constructor
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2006/01/12
use exclude file for making dependency release
Makefile
---------------------
2006/01/17
Read VR insistently yo fix [bugs.mrmf] (000215) Reading of VR fails sporadically with deflate transfer syntax
com/pixelmed/dicom/AttributeList.java
---------------------
2006/01/18
factor out directory location for mammo tests and add DVD as location
dumpcvslog.sh
com/pixelmed/display/Makefile
---------------------
2006/02/02
feed SingleImagePanel constructors SourceImage not BufferedImage
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
---------------------
2006/02/02
remove access to array of buffered images in SourceImage - get one at a time
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
---------------------
2006/02/02
separate generation of BufferedImage from data value array, and make lazy with single cache
com/pixelmed/display/SourceImage.java
---------------------
2006/02/02
add memory mapped OB and OW and use for SourceImage for shorts
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SourceImage.java
---------------------
2006/02/05
start work on CP 593 by adding new attributes and renaming others
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2006/02/05
move masking and sign extension into common code for memory mapped and in-memory data, and make minimum and maximum calculations lazy and per frame
com/pixelmed/display/SourceImage.java
---------------------
2006/02/07
make memory mappring more robust in face of out of memory exceptions; make non-memory mapped option work for more than one frame (was checking wrong index during copy)
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2006/02/11
mention different classpath on Unix versus Windows in example
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2006/02/11
tidy up command line argument handling and make consistent with documentation
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2006/02/11
tidy up javadoc
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2006/02/11
revise mammography annotations to match public comment draft of IHE profile
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2006/03/08
Fix [bugs.mrmf] (000220) Instance level query failing because matching on Specific Character Set
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2006/03/12
update ecg related stuff to use jakarta commons codec in classpath
ECGViewer.bat
ECGViewer.sh
Makefile
ECGViewer.app/Contents/Info.plist
---------------------
2006/03/24
fix [bugs.mrmf] (000223) PET images Units overridden by Rescale Type
com/pixelmed/dicom/RealWorldValueTransform.java
---------------------
2006/03/30
Fix [bugs.mrmf] (000224) Missing query/retrieve level in C-FIND response causes tree select and retrieve to fail
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/04/01
check for symbolic link before trying to make image directory from makefile
com/pixelmed/display/Makefile
---------------------
2006/04/01
message when retrieve done
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/04/01
make statistically derived window work for both 8 and 16 bit in memory and on disk images, by not changing min and max when getting buffered image unless new min and max values have actually been created during reading in a frame
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2006/04/02
Fix [bugs.mrmf] (000226) Lowercase sorts after all uppercase in query, database, DICOMDIR trees
com/pixelmed/utils/StringUtilities.java
---------------------
2006/04/02
always convert to favorable image type before resizing with graphics draw (else glacially slow color on Mac)
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2006/04/08
do not skip half as many bytes as needed for OtherWordAttributeOnDisk; also no need to truncate to int for readInsistently
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
---------------------
2006/04/18
allow that test database files might not exist when removing them
com/pixelmed/database/Makefile
---------------------
2006/04/19
update to hsqldb 1.8.0.4
README
lib/additional/hsqldb.jar
---------------------
2006/04/19
make sure padded value length reflects extracted padded bytes for extended character sets - support for fixing [bugs.mrmf] (000228) SpecificCharacterSet not sent in query responses, yet extended character strings values from database copied into query response values
com/pixelmed/dicom/StringAttribute.java
---------------------
2006/04/19
add toString() method for SpecificCharacterSet debugging
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2006/04/19
use SpecificCharacterSet when constructing new attributes not just when reading from input streams - support for fixing [bugs.mrmf] (000228) SpecificCharacterSet not sent in query responses, yet extended character strings values from database copied into query response values
com/pixelmed/dicom/AttributeFactory.java
---------------------
2006/04/19
Always include SpecificCharacterSet in query response and make it always ISO_IR 192 for UTF-8 - support for fixing [bugs.mrmf] (000228) SpecificCharacterSet not sent in query responses, yet extended character strings values from database copied into query response values
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2006/04/19
tidy up javadoc
com/pixelmed/network/ApplicationEntityMap.java
---------------------
2006/04/22
newline after usage string
com/pixelmed/network/ProbeCapability.java
---------------------
2006/04/22
add MacOS app for DicomImageViewer to repository
ECGViewer.app/Contents/Info.plist
---------------------
2006/04/24
Fix [bugs.mrmf] (000229) UIDGenerator can generate too long string if ourUnique is negative
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/UIDGenerator.java
---------------------
2006/04/26
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/dicom/BinaryOutputStream.java
---------------------
2006/04/26
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/04/26
Fix [bugs.mrmf] (000231) StorageSOPClassSCUPerformanceTest fails with storescp because sends meta-information header
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2006/04/26
add test case for performance
com/pixelmed/network/Makefile
---------------------
2006/04/26
Override multibyte write() method to Fix [bugs.mrmf] (000230) Much slower network performance when transfer syntaxes differ (message should be against r1.9 not r1.10)
com/pixelmed/dicom/BinaryOutputStream.java
---------------------
2006/04/26
tidy up javadoc
com/pixelmed/network/ApplicationEntityMap.java
---------------------
2006/04/27
interim fix of using only first multiplex group and warning for [bugs.mrmf] (000232) ECGViewer fails when more than one multiplex group
com/pixelmed/displaywave/DicomSourceECG.java
---------------------
2006/04/27
add standalone class to fix [bugs.mrmf] (000233) AttributeTreeBrowser will not work as a standalone application
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
---------------------
2006/05/02
Add a mechanism to choose SpecificCharacterSet based on values used in a string, and use it in query response generator to use the most likely character set to be compatible; addresses concern in [bugs.mrmf] (000234) Query response returns UTF-8 when 8859-1 would do and is better supported
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2006/05/02
Begin HL7 V2 work
com/pixelmed/hl7/v2/AL1.txt
com/pixelmed/hl7/v2/EVN.txt
com/pixelmed/hl7/v2/IAM.txt
com/pixelmed/hl7/v2/MRG.txt
com/pixelmed/hl7/v2/MSH.txt
com/pixelmed/hl7/v2/Makefile
com/pixelmed/hl7/v2/NK1.txt
com/pixelmed/hl7/v2/NPU.txt
com/pixelmed/hl7/v2/PD1.txt
com/pixelmed/hl7/v2/PID.txt
com/pixelmed/hl7/v2/PV1.txt
com/pixelmed/hl7/v2/PV2.txt
com/pixelmed/hl7/v2/support/MessageSegmentConvertTextTableToXML.awk
---------------------
2006/05/02
com/pixelmed/hl7/v2/ADT_A01_ADT_A01.txt
com/pixelmed/hl7/v2/DB1.txt
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/hl7/v2/Makefile
com/pixelmed/hl7/v2/PDA.txt
com/pixelmed/hl7/v2/support/MessageConvertTextTableToJavaParser.awk
---------------------
2006/05/16
com/pixelmed/display/Makefile
com/pixelmed/hl7/v2/HL7Message.java
---------------------
2006/05/16
Make request path look in root, not just com/pixelmed/web, fixes [bugs.mrmf] (000235) Cannot load AI viewer class files in web server
README
com/pixelmed/server/Makefile
com/pixelmed/server/testserver.properties
com/pixelmed/web/Makefile
com/pixelmed/web/PathRequestHandler.java
---------------------
2006/05/16
start work on xml translation of structured reports
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2006/05/17
disambiguate choice of null constructors for SpecificCharacterSet; specify consistent choice for SpecificCharacterSet between encoded string attributes and specified SpecificCharacterSet
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2006/05/17
add constructors with dictionary argument to fix [bugs.mrmf] (000236) Cannot easily extend columns in database information models
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
---------------------
2006/05/18
add encoding of top level tags as well as content tree to SR to XML
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2006/05/29
play with different looks and feel
NOTES
---------------------
2006/06/01
Fix [bugs.mrmf] (000238) Cannot create metainformation header for DICOMDIR
com/pixelmed/dicom/FileMetaInformation.java
---------------------
2006/06/01
add ability to convert XML representation of DICOM attributes back to DICOM - [bugs.mrmf] (000239)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2006/06/01
tidy up javadoc form DICOM to XML stuff
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2006/06/02
Implement [bugs.mrmf] (000240) MAC Address should use new Mustang API to get hardware address
com/pixelmed/utils/MACAddress.java
---------------------
2006/06/02
Implement [bugs.mrmf] (000240) MAC Address should use new Mustang API to get hardware address
com/pixelmed/utils/MACAddress.java
---------------------
2006/06/08
Fix [bugs.mrmf] (000241) Makefile.common.mk file missing from source distribution
Makefile
---------------------
2006/06/08
Fix wrong tag for error comment
com/pixelmed/network/CMoveResponseCommandMessage.java
---------------------
2006/06/08
Add error status for C-FIND SCP, add same methods to response generator as for C-MOVE, factor out numeric response statuses into separate class as enumerated values; fixes [bugs.mrmf] (000242) C-Find SCP not returning error status
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/RetrieveResponseGenerator.java
---------------------
2006/06/08
removed temporary workaround for [bugs.mrmf] (000213) K-PACS freaked out by valid unsupported optional keys pending response during C-FIND
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/06/14
add more information to transport connection close indication
com/pixelmed/network/AssociationInitiator.java
---------------------
2006/06/14
add MoveOriginatorMessageID to C-Store sub-operations for C-Moves (fix [bugs.mrmf] (000243))
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/06/14
also add MoveOriginatorApplicationEntityTitle to C-Store sub-operations for C-Moves (fix [bugs.mrmf] (000243))
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/06/19
Switch transfer syntax after meta-header when writing in AttributeList, and reuse DicomStreamCopier regression tests, fixes [bugs.mrmf] (000244) AttributeList.write() not actually encoding implicit VR when requested
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TransferSyntaxFromName.java
---------------------
2006/06/19
Fix [bugs.mrmf] (000245) AttributeList.write() main method and examples do not remove DataSetTrailingPadding
com/pixelmed/dicom/AttributeList.java
---------------------
2006/06/29
fix javadoc
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/07/17
update to 2006 DICOM standard plus first CP packet, including dictionary, sop classes and validator
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
docs/DicomImageViewer/Conformance.doc
---------------------
2006/07/20
remove all UIDs except those that are fixed like SOP classes or external references like coding schemes, based on UI VR (000247 part 1 remove)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
---------------------
2006/07/20
add option to consistently remap (rather than replace) UIDs (000247 part 2 remap); also make some private and final methods and variables protected and not final
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/07/25
add command line shell script to validate a dicom file
validate.sh
---------------------
2006/07/27
COPYRIGHT
com/pixelmed/dicom/UniqueIdentifierAttribute.java
---------------------
2006/08/05
factor out region detection stuff from SingleImagePanel
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
---------------------
2006/08/05
begin experiments with region drawing and selection
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/08/07
clamp pixel locations to within image boundary
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2006/08/07
undo premature commit
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/08/07
integrate blackout experiment into DicomImageViewer
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
---------------------
2006/08/07
integrate blackout experiment into DicomImageViewer
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/Makefile
---------------------
2006/08/07
undo premature commit
com/pixelmed/display/Makefile
---------------------
2006/08/07
add methods to get/set regions, and implement delete key to delete selected shapes
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
---------------------
2006/08/07
add utility class to blackout burned in annotation in images
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/08/07
add file chooser dialog
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
---------------------
2006/08/07
tidy up attribute list properly before writing
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/07
do not leave OB data on disk ... currently memory mapping not implemented in display routines for other than OW grayscale
com/pixelmed/dicom/AttributeFactory.java
---------------------
2006/08/07
straighten out cursor interactions between JFrame and SingleImagePanel (needs to be before revalidate)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/07
more work on status and unsaved changes
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/08
tidy up javadoc
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/08/08
add flag to indicate whether or not transfer syntax (may) use color space transformation
com/pixelmed/dicom/TransferSyntax.java
---------------------
2006/08/08
tidy up photometric interpretation if left over from decompression, add burned in annotation flag handling, and tidy up javadoc
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2006/08/08
remove recursive loop in mayBeTransformedColorSpace !
com/pixelmed/dicom/TransferSyntax.java
---------------------
2006/08/08
remove blackout tests from DicomImageViewer
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/08/08
remove blackout tests from DicomImageViewer
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/08/09
ignore SOP Class, in case no meta-header, just go for it and fail if not image
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/09
speed up copying by using (type-specific) DataBuffer.getBankData() method rather than SampleModel.getPixels()
com/pixelmed/display/ImageEditUtilities.java
---------------------
2006/08/09
add windows batch file for blackout
DicomImageBlackout.bat
---------------------
2006/08/09
optimize conversion to most favorable color model by skipping if already correct color model; optimize resizing by returning immediately if no resizing actually necessary; indirect all calls to convertToMostFavorableImageTypeXXX() through convertToMostFavorableImageType()
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2006/08/09
indirect all calls to convertToMostFavorableImageTypeXXX() through convertToMostFavorableImageType()
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/08/09
always useConvertToMostFavorableImageType, even on Mac, since faster on all platforms
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/08/09
resize dynamically depending on image size
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2006/08/09
Pass on rather than catch exception if unable to read encapsulated data whilst reading attribute list
com/pixelmed/dicom/AttributeList.java
---------------------
2006/08/09
tidy up exception handling, check for image SOP Class, whether meta-header or not
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/09
experiments with spring size and maximum size related to screen size
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/10
add multiple file transfer capability to main method
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/08/12
add cine slider to button panel
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/12
more experiments with centering and sizing - at least allow resize larger than initial, even if not centered to start
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
---------------------
2006/08/13
more unsuccessful screwing around with centered layout without resizing SingleImagePanel
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/13
add conversion using DataBuffer to packed samples rather than getPixels when possible - fast on windows
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2006/08/13
bail out before wasting time allocating dstRaster in DataBuffer convert if not going to do it
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2006/08/13
only force convert to favorable when > 1 component. regardless of platform
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/08/13
tidy up debugging messages
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/08/13
use spring layout to avoid resize resample to center on first display
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/13
use our own centering layout manager, and tidy up sizing and validate() calls to make initial display always unresampled if possible
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/13
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2006/08/15
add write() methods for other byte/word attributes left on disk using new CopyStream methods that take an offset and allow for byte swapping, and add file set method in case file is renamed, preferrably invoked through AttributeList
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/utils/CopyStream.java
---------------------
2006/08/15
do not change ImagePixelModule descriptive attributes unless absolutely necessary
com/pixelmed/display/ImageEditUtilities.java
---------------------
2006/08/15
add a method to rename a file if possible and copy it if not
com/pixelmed/utils/FileUtilities.java
---------------------
2006/08/15
add attributes recording that de-identification has been performed
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/08/15
fix error under windows in which one cannot rename/copy the file to backup if it has memory mapped pixel data open, by closing the underlying source image first, then renaming and saving, then reloading the file; also add make maximum initial dimension smaller (else cutoff on Mac laptop), and add or extend DeidentificationMethod with comment indicating that pixel data has been blacked out
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/08/15
document need to use setFileUsedByOnDiskAttributes()
com/pixelmed/dicom/AttributeList.java
---------------------
2006/08/15
record state of drawing shapes for next file and apply if same size
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
---------------------
2006/10/08
correct wrong VR in example for PatientID
com/pixelmed/network/FindSOPClassSCU.java
---------------------
2006/10/08
add ability to keep full attribute list hanging around for set of dicom files
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2006/10/08
silence store SCU unless debugging
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/10/08
factor out remapping and removal of UIDs from other de-identification tasks
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
---------------------
2006/10/08
do not ignore UID remapping when first creating map
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/10/08
add graymax server target
com/pixelmed/server/Makefile
com/pixelmed/server/graymax.properties
---------------------
2006/10/08
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/10/08
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/10/08
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/10/08
use replacement UID value first time it is generated !
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/10/08
use replacement UID value first time it is generated !
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2006/10/08
close files after reading when received and inserted in database to avoid file resource leaks
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoServer.java
---------------------
2006/10/08
add script for graymax server
com/pixelmed/server/graymaxserver.sh
---------------------
2006/10/09
attempt to create saved images folder as is if does not exist, BEFORE trying path as relative to home directory
com/pixelmed/database/DatabaseApplicationProperties.java
---------------------
2006/10/09
com/pixelmed/database/DatabaseApplicationProperties.java
---------------------
2006/10/15
add ability to write one or more attribute lists (not just files) over DICOM association (000249)
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/10/15
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/10/15
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/10/15
for multiple instance send, do not close stream after writing each one (!)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2006/10/15
measure database re-read and insertion time in server
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2006/10/15
measure file receive time over network
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
Add alternate received file strategies, including reverse hierarchy of folders by UID components to address [bugs.mrmf] (000250) Performance of server degrades with large number of files in single received file folder
com/pixelmed/network/Makefile
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2006/10/15
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
check for nonexistence of and make if necessary parent directories of received file
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
comment out network receive and file write timing checks
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2006/10/15
consider possibility of collision of file and directory built from same UID components, and fall back to basic strategy
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
try using our own mkdirs to avoid problem with standard one
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/utils/FileUtilities.java
---------------------
2006/10/15
try using our own mkdirs to avoid problem with standard one
com/pixelmed/utils/FileUtilities.java
---------------------
2006/10/15
do not even attempt to use File.mkdirs()
com/pixelmed/utils/FileUtilities.java
---------------------
2006/10/15
problem was not File.mkdirs(), it was too many subfolders due to Linux ext2 limit; remove our own version of mkdirs(); add new strategy based on hashcode of uid string
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/utils/FileUtilities.java
---------------------
2006/10/15
switch server to hashcode folder strategy
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2006/10/15
divide by 10 rather than single bit shift for hashcode for folder names
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
limit depth of hashcode based folders not by hashcode but by maximum integer
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
avoid negative values decimated from hashcode by using long
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/15
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/16
handle absolute and relative saved image folders separately, ensuring specified path will be created or used if absolute, or relative to user home directory (and never relative to current working directory
com/pixelmed/database/DatabaseApplicationProperties.java
---------------------
2006/10/16
tidy up debugging messages
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2006/10/16
increase database file size property from default 2GB to 8GB
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2006/10/16
tidy up javadoc
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2006/10/16
database property must be quoted string
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2006/10/16
upgrade to hsqldb 1.8.0.7
README
lib/additional/hsqldb.jar
---------------------
2006/10/17
tidy up some javadoc related to the server application and add aiviewer.jar to the dependencies release
Makefile
LICENSES/aiviewer_COPYRIGHT.htm
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/WebServerApplicationProperties.java
lib/additional/aiviewer.jar
---------------------
2006/10/17
turn off message when proxy selector deactivated
com/pixelmed/network/AssociationFactory.java
---------------------
2006/10/17
add class and utility to import all DICOM files from media and send to specified network target
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/PrintStreamMessageLogger.java
---------------------
2006/10/19
Fix [bugs.mrmf] (000252) User adjusted window center and width should be remembered across frames even if set from outside via event rather than mouse dragged
com/pixelmed/display/SingleImagePanel.java
---------------------
2006/10/19
update jmdns to support latest sourceforge cvs version + reapply timeout changes and suppress use of IPV6 address (to workaround (000255) - not a permanent fix if IPV6 support is actually needed)
README
lib/additional/jmdns.jar
---------------------
2006/10/19
do not attempt network transfer if nothing imported from media
com/pixelmed/network/NetworkMediaImporter.java
---------------------
2006/10/19
add (editable) batch file to initiate media import and network transfer on windows
NetworkMediaImporter.bat
---------------------
2006/10/20
do not warn when diffusion B value is 0, since that is legitimate
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2006/10/20
annotation with diffusion B value when present
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2006/10/20
add diffusion direction vector to annotations
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2006/10/21
use JIIO version jai_imageio-1_1-lib-windows-i586.exe
DicomImageViewerWithCDJRE.bat
README
dumpcvslog.sh
lib/additional/clib_jiio.dll
lib/additional/clib_jiio_sse2.dll
lib/additional/clib_jiio_util.dll
lib/additional/clibwrapper_jiio.jar
lib/additional/jai_imageio.jar
---------------------
2006/10/21
update documentation for 2006/10/21 release
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2006/10/21
add windows JRE
windows/jre1.5.0_09/CHANGES
windows/jre1.5.0_09/COPYRIGHT
windows/jre1.5.0_09/LICENSE
windows/jre1.5.0_09/PATCH.ERR
windows/jre1.5.0_09/README.txt
windows/jre1.5.0_09/THIRDPARTYLICENSEREADME.txt
windows/jre1.5.0_09/Welcome.html
windows/jre1.5.0_09/bin/JavaWebStart.dll
windows/jre1.5.0_09/bin/JdbcOdbc.dll
windows/jre1.5.0_09/bin/NPJPI150_09.dll
windows/jre1.5.0_09/bin/NPJava11.dll
windows/jre1.5.0_09/bin/NPJava12.dll
windows/jre1.5.0_09/bin/NPJava13.dll
windows/jre1.5.0_09/bin/NPJava14.dll
windows/jre1.5.0_09/bin/NPJava32.dll
windows/jre1.5.0_09/bin/NPOJI610.dll
windows/jre1.5.0_09/bin/RegUtils.dll
windows/jre1.5.0_09/bin/awt.dll
windows/jre1.5.0_09/bin/axbridge.dll
windows/jre1.5.0_09/bin/cmm.dll
windows/jre1.5.0_09/bin/dcpr.dll
windows/jre1.5.0_09/bin/deploy.dll
windows/jre1.5.0_09/bin/dt_shmem.dll
windows/jre1.5.0_09/bin/dt_socket.dll
windows/jre1.5.0_09/bin/fontmanager.dll
windows/jre1.5.0_09/bin/hpi.dll
windows/jre1.5.0_09/bin/hprof.dll
windows/jre1.5.0_09/bin/instrument.dll
windows/jre1.5.0_09/bin/ioser12.dll
windows/jre1.5.0_09/bin/j2pkcs11.dll
windows/jre1.5.0_09/bin/jaas_nt.dll
windows/jre1.5.0_09/bin/java.dll
windows/jre1.5.0_09/bin/java.exe
windows/jre1.5.0_09/bin/java_crw_demo.dll
windows/jre1.5.0_09/bin/javacpl.exe
windows/jre1.5.0_09/bin/javaw.exe
windows/jre1.5.0_09/bin/javaws.exe
windows/jre1.5.0_09/bin/jawt.dll
windows/jre1.5.0_09/bin/jdwp.dll
windows/jre1.5.0_09/bin/jpeg.dll
windows/jre1.5.0_09/bin/jpicom32.dll
windows/jre1.5.0_09/bin/jpicpl32.cpl
windows/jre1.5.0_09/bin/jpiexp32.dll
windows/jre1.5.0_09/bin/jpinscp.dll
windows/jre1.5.0_09/bin/jpioji.dll
windows/jre1.5.0_09/bin/jpishare.dll
windows/jre1.5.0_09/bin/jsound.dll
windows/jre1.5.0_09/bin/jsoundds.dll
windows/jre1.5.0_09/bin/jucheck.exe
windows/jre1.5.0_09/bin/jusched.exe
windows/jre1.5.0_09/bin/keytool.exe
windows/jre1.5.0_09/bin/kinit.exe
windows/jre1.5.0_09/bin/klist.exe
windows/jre1.5.0_09/bin/ktab.exe
windows/jre1.5.0_09/bin/management.dll
windows/jre1.5.0_09/bin/net.dll
windows/jre1.5.0_09/bin/nio.dll
windows/jre1.5.0_09/bin/orbd.exe
windows/jre1.5.0_09/bin/pack200.exe
windows/jre1.5.0_09/bin/policytool.exe
windows/jre1.5.0_09/bin/rmi.dll
windows/jre1.5.0_09/bin/rmid.exe
windows/jre1.5.0_09/bin/rmiregistry.exe
windows/jre1.5.0_09/bin/servertool.exe
windows/jre1.5.0_09/bin/ssv.dll
windows/jre1.5.0_09/bin/tnameserv.exe
windows/jre1.5.0_09/bin/unicows.dll
windows/jre1.5.0_09/bin/unpack.dll
windows/jre1.5.0_09/bin/unpack200.exe
windows/jre1.5.0_09/bin/verify.dll
windows/jre1.5.0_09/bin/w2k_lsa_auth.dll
windows/jre1.5.0_09/bin/zip.dll
windows/jre1.5.0_09/bin/client/Xusage.txt
windows/jre1.5.0_09/bin/client/classes.jsa
windows/jre1.5.0_09/bin/client/jvm.dll
windows/jre1.5.0_09/lib/classlist
windows/jre1.5.0_09/lib/content-types.properties
windows/jre1.5.0_09/lib/deploy.jar
windows/jre1.5.0_09/lib/flavormap.properties
windows/jre1.5.0_09/lib/fontconfig.98.bfc
windows/jre1.5.0_09/lib/fontconfig.98.properties.src
windows/jre1.5.0_09/lib/fontconfig.Me.bfc
windows/jre1.5.0_09/lib/fontconfig.Me.properties.src
windows/jre1.5.0_09/lib/fontconfig.bfc
windows/jre1.5.0_09/lib/fontconfig.properties.src
windows/jre1.5.0_09/lib/javaws.jar
windows/jre1.5.0_09/lib/jce.jar
windows/jre1.5.0_09/lib/jsse.jar
windows/jre1.5.0_09/lib/jvm.hprof.txt
windows/jre1.5.0_09/lib/logging.properties
windows/jre1.5.0_09/lib/net.properties
windows/jre1.5.0_09/lib/plugin.jar
windows/jre1.5.0_09/lib/psfont.properties.ja
windows/jre1.5.0_09/lib/psfontj2d.properties
windows/jre1.5.0_09/lib/rt.jar
windows/jre1.5.0_09/lib/sound.properties
windows/jre1.5.0_09/lib/tzmappings
windows/jre1.5.0_09/lib/cmm/CIEXYZ.pf
windows/jre1.5.0_09/lib/cmm/GRAY.pf
windows/jre1.5.0_09/lib/cmm/LINEAR_RGB.pf
windows/jre1.5.0_09/lib/cmm/sRGB.pf
windows/jre1.5.0_09/lib/ext/dnsns.jar
windows/jre1.5.0_09/lib/ext/sunjce_provider.jar
windows/jre1.5.0_09/lib/ext/sunpkcs11.jar
windows/jre1.5.0_09/lib/fonts/LucidaSansRegular.ttf
windows/jre1.5.0_09/lib/i386/jvm.cfg
windows/jre1.5.0_09/lib/im/indicim.jar
windows/jre1.5.0_09/lib/im/thaiim.jar
windows/jre1.5.0_09/lib/images/cursors/cursors.properties
windows/jre1.5.0_09/lib/images/cursors/invalid32x32.gif
windows/jre1.5.0_09/lib/images/cursors/win32_CopyDrop32x32.gif
windows/jre1.5.0_09/lib/images/cursors/win32_CopyNoDrop32x32.gif
windows/jre1.5.0_09/lib/images/cursors/win32_LinkDrop32x32.gif
windows/jre1.5.0_09/lib/images/cursors/win32_LinkNoDrop32x32.gif
windows/jre1.5.0_09/lib/images/cursors/win32_MoveDrop32x32.gif
windows/jre1.5.0_09/lib/images/cursors/win32_MoveNoDrop32x32.gif
windows/jre1.5.0_09/lib/javaws/messages.properties
windows/jre1.5.0_09/lib/javaws/messages_de.properties
windows/jre1.5.0_09/lib/javaws/messages_es.properties
windows/jre1.5.0_09/lib/javaws/messages_fr.properties
windows/jre1.5.0_09/lib/javaws/messages_it.properties
windows/jre1.5.0_09/lib/javaws/messages_ja.properties
windows/jre1.5.0_09/lib/javaws/messages_ko.properties
windows/jre1.5.0_09/lib/javaws/messages_sv.properties
windows/jre1.5.0_09/lib/javaws/messages_zh_CN.properties
windows/jre1.5.0_09/lib/javaws/messages_zh_HK.properties
windows/jre1.5.0_09/lib/javaws/messages_zh_TW.properties
windows/jre1.5.0_09/lib/javaws/miniSplash.jpg
windows/jre1.5.0_09/lib/management/jmxremote.access
windows/jre1.5.0_09/lib/management/jmxremote.password.template
windows/jre1.5.0_09/lib/management/management.properties
windows/jre1.5.0_09/lib/management/snmp.acl.template
windows/jre1.5.0_09/lib/security/US_export_policy.jar
windows/jre1.5.0_09/lib/security/cacerts
windows/jre1.5.0_09/lib/security/java.policy
windows/jre1.5.0_09/lib/security/java.security
windows/jre1.5.0_09/lib/security/javaws.policy
windows/jre1.5.0_09/lib/security/local_policy.jar
windows/jre1.5.0_09/lib/zi/CET
windows/jre1.5.0_09/lib/zi/CST6CDT
windows/jre1.5.0_09/lib/zi/EET
windows/jre1.5.0_09/lib/zi/EST
windows/jre1.5.0_09/lib/zi/EST5EDT
windows/jre1.5.0_09/lib/zi/GMT
windows/jre1.5.0_09/lib/zi/HST
windows/jre1.5.0_09/lib/zi/MET
windows/jre1.5.0_09/lib/zi/MST
windows/jre1.5.0_09/lib/zi/MST7MDT
windows/jre1.5.0_09/lib/zi/PST8PDT
windows/jre1.5.0_09/lib/zi/WET
windows/jre1.5.0_09/lib/zi/ZoneInfoMappings
windows/jre1.5.0_09/lib/zi/Africa/Abidjan
windows/jre1.5.0_09/lib/zi/Africa/Accra
windows/jre1.5.0_09/lib/zi/Africa/Addis_Ababa
windows/jre1.5.0_09/lib/zi/Africa/Algiers
windows/jre1.5.0_09/lib/zi/Africa/Asmera
windows/jre1.5.0_09/lib/zi/Africa/Bamako
windows/jre1.5.0_09/lib/zi/Africa/Bangui
windows/jre1.5.0_09/lib/zi/Africa/Banjul
windows/jre1.5.0_09/lib/zi/Africa/Bissau
windows/jre1.5.0_09/lib/zi/Africa/Blantyre
windows/jre1.5.0_09/lib/zi/Africa/Brazzaville
windows/jre1.5.0_09/lib/zi/Africa/Bujumbura
windows/jre1.5.0_09/lib/zi/Africa/Cairo
windows/jre1.5.0_09/lib/zi/Africa/Casablanca
windows/jre1.5.0_09/lib/zi/Africa/Ceuta
windows/jre1.5.0_09/lib/zi/Africa/Conakry
windows/jre1.5.0_09/lib/zi/Africa/Dakar
windows/jre1.5.0_09/lib/zi/Africa/Dar_es_Salaam
windows/jre1.5.0_09/lib/zi/Africa/Djibouti
windows/jre1.5.0_09/lib/zi/Africa/Douala
windows/jre1.5.0_09/lib/zi/Africa/El_Aaiun
windows/jre1.5.0_09/lib/zi/Africa/Freetown
windows/jre1.5.0_09/lib/zi/Africa/Gaborone
windows/jre1.5.0_09/lib/zi/Africa/Harare
windows/jre1.5.0_09/lib/zi/Africa/Johannesburg
windows/jre1.5.0_09/lib/zi/Africa/Kampala
windows/jre1.5.0_09/lib/zi/Africa/Khartoum
windows/jre1.5.0_09/lib/zi/Africa/Kigali
windows/jre1.5.0_09/lib/zi/Africa/Kinshasa
windows/jre1.5.0_09/lib/zi/Africa/Lagos
windows/jre1.5.0_09/lib/zi/Africa/Libreville
windows/jre1.5.0_09/lib/zi/Africa/Lome
windows/jre1.5.0_09/lib/zi/Africa/Luanda
windows/jre1.5.0_09/lib/zi/Africa/Lubumbashi
windows/jre1.5.0_09/lib/zi/Africa/Lusaka
windows/jre1.5.0_09/lib/zi/Africa/Malabo
windows/jre1.5.0_09/lib/zi/Africa/Maputo
windows/jre1.5.0_09/lib/zi/Africa/Maseru
windows/jre1.5.0_09/lib/zi/Africa/Mbabane
windows/jre1.5.0_09/lib/zi/Africa/Mogadishu
windows/jre1.5.0_09/lib/zi/Africa/Monrovia
windows/jre1.5.0_09/lib/zi/Africa/Nairobi
windows/jre1.5.0_09/lib/zi/Africa/Ndjamena
windows/jre1.5.0_09/lib/zi/Africa/Niamey
windows/jre1.5.0_09/lib/zi/Africa/Nouakchott
windows/jre1.5.0_09/lib/zi/Africa/Ouagadougou
windows/jre1.5.0_09/lib/zi/Africa/Porto-Novo
windows/jre1.5.0_09/lib/zi/Africa/Sao_Tome
windows/jre1.5.0_09/lib/zi/Africa/Tripoli
windows/jre1.5.0_09/lib/zi/Africa/Tunis
windows/jre1.5.0_09/lib/zi/Africa/Windhoek
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windows/jre1.5.0_09/lib/zi/America/Cayman
windows/jre1.5.0_09/lib/zi/America/Chicago
windows/jre1.5.0_09/lib/zi/America/Chihuahua
windows/jre1.5.0_09/lib/zi/America/Coral_Harbour
windows/jre1.5.0_09/lib/zi/America/Costa_Rica
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windows/jre1.5.0_09/lib/zi/America/Dawson
windows/jre1.5.0_09/lib/zi/America/Dawson_Creek
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windows/jre1.5.0_09/lib/zi/America/Eirunepe
windows/jre1.5.0_09/lib/zi/America/El_Salvador
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windows/jre1.5.0_09/lib/zi/America/Havana
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windows/jre1.5.0_09/lib/zi/America/St_Johns
windows/jre1.5.0_09/lib/zi/America/St_Kitts
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windows/jre1.5.0_09/lib/zi/America/St_Vincent
windows/jre1.5.0_09/lib/zi/America/Swift_Current
windows/jre1.5.0_09/lib/zi/America/Tegucigalpa
windows/jre1.5.0_09/lib/zi/America/Thule
windows/jre1.5.0_09/lib/zi/America/Thunder_Bay
windows/jre1.5.0_09/lib/zi/America/Tijuana
windows/jre1.5.0_09/lib/zi/America/Toronto
windows/jre1.5.0_09/lib/zi/America/Tortola
windows/jre1.5.0_09/lib/zi/America/Vancouver
windows/jre1.5.0_09/lib/zi/America/Whitehorse
windows/jre1.5.0_09/lib/zi/America/Winnipeg
windows/jre1.5.0_09/lib/zi/America/Yakutat
windows/jre1.5.0_09/lib/zi/America/Yellowknife
windows/jre1.5.0_09/lib/zi/America/Argentina/Buenos_Aires
windows/jre1.5.0_09/lib/zi/America/Argentina/Catamarca
windows/jre1.5.0_09/lib/zi/America/Argentina/Cordoba
windows/jre1.5.0_09/lib/zi/America/Argentina/Jujuy
windows/jre1.5.0_09/lib/zi/America/Argentina/La_Rioja
windows/jre1.5.0_09/lib/zi/America/Argentina/Mendoza
windows/jre1.5.0_09/lib/zi/America/Argentina/Rio_Gallegos
windows/jre1.5.0_09/lib/zi/America/Argentina/San_Juan
windows/jre1.5.0_09/lib/zi/America/Argentina/Tucuman
windows/jre1.5.0_09/lib/zi/America/Argentina/Ushuaia
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windows/jre1.5.0_09/lib/zi/America/Indiana/Knox
windows/jre1.5.0_09/lib/zi/America/Indiana/Marengo
windows/jre1.5.0_09/lib/zi/America/Indiana/Petersburg
windows/jre1.5.0_09/lib/zi/America/Indiana/Vevay
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windows/jre1.5.0_09/lib/zi/America/Kentucky/Louisville
windows/jre1.5.0_09/lib/zi/America/Kentucky/Monticello
windows/jre1.5.0_09/lib/zi/America/North_Dakota/Center
windows/jre1.5.0_09/lib/zi/America/North_Dakota/New_Salem
windows/jre1.5.0_09/lib/zi/Antarctica/Casey
windows/jre1.5.0_09/lib/zi/Antarctica/Davis
windows/jre1.5.0_09/lib/zi/Antarctica/DumontDUrville
windows/jre1.5.0_09/lib/zi/Antarctica/Mawson
windows/jre1.5.0_09/lib/zi/Antarctica/McMurdo
windows/jre1.5.0_09/lib/zi/Antarctica/Palmer
windows/jre1.5.0_09/lib/zi/Antarctica/Rothera
windows/jre1.5.0_09/lib/zi/Antarctica/Syowa
windows/jre1.5.0_09/lib/zi/Antarctica/Vostok
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windows/jre1.5.0_09/lib/zi/Asia/Ashgabat
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windows/jre1.5.0_09/lib/zi/Asia/Baku
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windows/jre1.5.0_09/lib/zi/Asia/Bishkek
windows/jre1.5.0_09/lib/zi/Asia/Brunei
windows/jre1.5.0_09/lib/zi/Asia/Calcutta
windows/jre1.5.0_09/lib/zi/Asia/Choibalsan
windows/jre1.5.0_09/lib/zi/Asia/Chongqing
windows/jre1.5.0_09/lib/zi/Asia/Colombo
windows/jre1.5.0_09/lib/zi/Asia/Damascus
windows/jre1.5.0_09/lib/zi/Asia/Dhaka
windows/jre1.5.0_09/lib/zi/Asia/Dili
windows/jre1.5.0_09/lib/zi/Asia/Dubai
windows/jre1.5.0_09/lib/zi/Asia/Dushanbe
windows/jre1.5.0_09/lib/zi/Asia/Gaza
windows/jre1.5.0_09/lib/zi/Asia/Harbin
windows/jre1.5.0_09/lib/zi/Asia/Hong_Kong
windows/jre1.5.0_09/lib/zi/Asia/Hovd
windows/jre1.5.0_09/lib/zi/Asia/Irkutsk
windows/jre1.5.0_09/lib/zi/Asia/Jakarta
windows/jre1.5.0_09/lib/zi/Asia/Jayapura
windows/jre1.5.0_09/lib/zi/Asia/Jerusalem
windows/jre1.5.0_09/lib/zi/Asia/Kabul
windows/jre1.5.0_09/lib/zi/Asia/Kamchatka
windows/jre1.5.0_09/lib/zi/Asia/Karachi
windows/jre1.5.0_09/lib/zi/Asia/Kashgar
windows/jre1.5.0_09/lib/zi/Asia/Katmandu
windows/jre1.5.0_09/lib/zi/Asia/Krasnoyarsk
windows/jre1.5.0_09/lib/zi/Asia/Kuala_Lumpur
windows/jre1.5.0_09/lib/zi/Asia/Kuching
windows/jre1.5.0_09/lib/zi/Asia/Kuwait
windows/jre1.5.0_09/lib/zi/Asia/Macau
windows/jre1.5.0_09/lib/zi/Asia/Magadan
windows/jre1.5.0_09/lib/zi/Asia/Makassar
windows/jre1.5.0_09/lib/zi/Asia/Manila
windows/jre1.5.0_09/lib/zi/Asia/Muscat
windows/jre1.5.0_09/lib/zi/Asia/Nicosia
windows/jre1.5.0_09/lib/zi/Asia/Novosibirsk
windows/jre1.5.0_09/lib/zi/Asia/Omsk
windows/jre1.5.0_09/lib/zi/Asia/Oral
windows/jre1.5.0_09/lib/zi/Asia/Phnom_Penh
windows/jre1.5.0_09/lib/zi/Asia/Pontianak
windows/jre1.5.0_09/lib/zi/Asia/Pyongyang
windows/jre1.5.0_09/lib/zi/Asia/Qatar
windows/jre1.5.0_09/lib/zi/Asia/Qyzylorda
windows/jre1.5.0_09/lib/zi/Asia/Rangoon
windows/jre1.5.0_09/lib/zi/Asia/Riyadh
windows/jre1.5.0_09/lib/zi/Asia/Riyadh87
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windows/jre1.5.0_09/lib/zi/Asia/Sakhalin
windows/jre1.5.0_09/lib/zi/Asia/Samarkand
windows/jre1.5.0_09/lib/zi/Asia/Seoul
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windows/jre1.5.0_09/lib/zi/Asia/Singapore
windows/jre1.5.0_09/lib/zi/Asia/Taipei
windows/jre1.5.0_09/lib/zi/Asia/Tashkent
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windows/jre1.5.0_09/lib/zi/Asia/Tehran
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windows/jre1.5.0_09/lib/zi/Asia/Ulaanbaatar
windows/jre1.5.0_09/lib/zi/Asia/Urumqi
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windows/jre1.5.0_09/lib/zi/Asia/Vladivostok
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windows/jre1.5.0_09/lib/zi/Asia/Yekaterinburg
windows/jre1.5.0_09/lib/zi/Asia/Yerevan
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windows/jre1.5.0_09/lib/zi/Atlantic/Cape_Verde
windows/jre1.5.0_09/lib/zi/Atlantic/Faeroe
windows/jre1.5.0_09/lib/zi/Atlantic/Madeira
windows/jre1.5.0_09/lib/zi/Atlantic/Reykjavik
windows/jre1.5.0_09/lib/zi/Atlantic/South_Georgia
windows/jre1.5.0_09/lib/zi/Atlantic/St_Helena
windows/jre1.5.0_09/lib/zi/Atlantic/Stanley
windows/jre1.5.0_09/lib/zi/Australia/Adelaide
windows/jre1.5.0_09/lib/zi/Australia/Brisbane
windows/jre1.5.0_09/lib/zi/Australia/Broken_Hill
windows/jre1.5.0_09/lib/zi/Australia/Currie
windows/jre1.5.0_09/lib/zi/Australia/Darwin
windows/jre1.5.0_09/lib/zi/Australia/Hobart
windows/jre1.5.0_09/lib/zi/Australia/Lindeman
windows/jre1.5.0_09/lib/zi/Australia/Lord_Howe
windows/jre1.5.0_09/lib/zi/Australia/Melbourne
windows/jre1.5.0_09/lib/zi/Australia/Perth
windows/jre1.5.0_09/lib/zi/Australia/Sydney
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windows/jre1.5.0_09/lib/zi/Etc/GMT-2
windows/jre1.5.0_09/lib/zi/Etc/GMT-3
windows/jre1.5.0_09/lib/zi/Etc/GMT-4
windows/jre1.5.0_09/lib/zi/Etc/GMT-5
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windows/jre1.5.0_09/lib/zi/Etc/GMT-9
windows/jre1.5.0_09/lib/zi/Etc/UCT
windows/jre1.5.0_09/lib/zi/Etc/UTC
windows/jre1.5.0_09/lib/zi/Europe/Amsterdam
windows/jre1.5.0_09/lib/zi/Europe/Andorra
windows/jre1.5.0_09/lib/zi/Europe/Athens
windows/jre1.5.0_09/lib/zi/Europe/Belgrade
windows/jre1.5.0_09/lib/zi/Europe/Berlin
windows/jre1.5.0_09/lib/zi/Europe/Brussels
windows/jre1.5.0_09/lib/zi/Europe/Bucharest
windows/jre1.5.0_09/lib/zi/Europe/Budapest
windows/jre1.5.0_09/lib/zi/Europe/Chisinau
windows/jre1.5.0_09/lib/zi/Europe/Copenhagen
windows/jre1.5.0_09/lib/zi/Europe/Dublin
windows/jre1.5.0_09/lib/zi/Europe/Gibraltar
windows/jre1.5.0_09/lib/zi/Europe/Helsinki
windows/jre1.5.0_09/lib/zi/Europe/Istanbul
windows/jre1.5.0_09/lib/zi/Europe/Kaliningrad
windows/jre1.5.0_09/lib/zi/Europe/Kiev
windows/jre1.5.0_09/lib/zi/Europe/Lisbon
windows/jre1.5.0_09/lib/zi/Europe/London
windows/jre1.5.0_09/lib/zi/Europe/Luxembourg
windows/jre1.5.0_09/lib/zi/Europe/Madrid
windows/jre1.5.0_09/lib/zi/Europe/Malta
windows/jre1.5.0_09/lib/zi/Europe/Minsk
windows/jre1.5.0_09/lib/zi/Europe/Monaco
windows/jre1.5.0_09/lib/zi/Europe/Moscow
windows/jre1.5.0_09/lib/zi/Europe/Oslo
windows/jre1.5.0_09/lib/zi/Europe/Paris
windows/jre1.5.0_09/lib/zi/Europe/Prague
windows/jre1.5.0_09/lib/zi/Europe/Riga
windows/jre1.5.0_09/lib/zi/Europe/Rome
windows/jre1.5.0_09/lib/zi/Europe/Samara
windows/jre1.5.0_09/lib/zi/Europe/Simferopol
windows/jre1.5.0_09/lib/zi/Europe/Sofia
windows/jre1.5.0_09/lib/zi/Europe/Stockholm
windows/jre1.5.0_09/lib/zi/Europe/Tallinn
windows/jre1.5.0_09/lib/zi/Europe/Tirane
windows/jre1.5.0_09/lib/zi/Europe/Uzhgorod
windows/jre1.5.0_09/lib/zi/Europe/Vaduz
windows/jre1.5.0_09/lib/zi/Europe/Vienna
windows/jre1.5.0_09/lib/zi/Europe/Vilnius
windows/jre1.5.0_09/lib/zi/Europe/Warsaw
windows/jre1.5.0_09/lib/zi/Europe/Zaporozhye
windows/jre1.5.0_09/lib/zi/Europe/Zurich
windows/jre1.5.0_09/lib/zi/Indian/Antananarivo
windows/jre1.5.0_09/lib/zi/Indian/Chagos
windows/jre1.5.0_09/lib/zi/Indian/Christmas
windows/jre1.5.0_09/lib/zi/Indian/Cocos
windows/jre1.5.0_09/lib/zi/Indian/Comoro
windows/jre1.5.0_09/lib/zi/Indian/Kerguelen
windows/jre1.5.0_09/lib/zi/Indian/Mahe
windows/jre1.5.0_09/lib/zi/Indian/Maldives
windows/jre1.5.0_09/lib/zi/Indian/Mauritius
windows/jre1.5.0_09/lib/zi/Indian/Mayotte
windows/jre1.5.0_09/lib/zi/Indian/Reunion
windows/jre1.5.0_09/lib/zi/Pacific/Apia
windows/jre1.5.0_09/lib/zi/Pacific/Auckland
windows/jre1.5.0_09/lib/zi/Pacific/Chatham
windows/jre1.5.0_09/lib/zi/Pacific/Easter
windows/jre1.5.0_09/lib/zi/Pacific/Efate
windows/jre1.5.0_09/lib/zi/Pacific/Enderbury
windows/jre1.5.0_09/lib/zi/Pacific/Fakaofo
windows/jre1.5.0_09/lib/zi/Pacific/Fiji
windows/jre1.5.0_09/lib/zi/Pacific/Funafuti
windows/jre1.5.0_09/lib/zi/Pacific/Galapagos
windows/jre1.5.0_09/lib/zi/Pacific/Gambier
windows/jre1.5.0_09/lib/zi/Pacific/Guadalcanal
windows/jre1.5.0_09/lib/zi/Pacific/Guam
windows/jre1.5.0_09/lib/zi/Pacific/Honolulu
windows/jre1.5.0_09/lib/zi/Pacific/Johnston
windows/jre1.5.0_09/lib/zi/Pacific/Kiritimati
windows/jre1.5.0_09/lib/zi/Pacific/Kosrae
windows/jre1.5.0_09/lib/zi/Pacific/Kwajalein
windows/jre1.5.0_09/lib/zi/Pacific/Majuro
windows/jre1.5.0_09/lib/zi/Pacific/Marquesas
windows/jre1.5.0_09/lib/zi/Pacific/Midway
windows/jre1.5.0_09/lib/zi/Pacific/Nauru
windows/jre1.5.0_09/lib/zi/Pacific/Niue
windows/jre1.5.0_09/lib/zi/Pacific/Norfolk
windows/jre1.5.0_09/lib/zi/Pacific/Noumea
windows/jre1.5.0_09/lib/zi/Pacific/Pago_Pago
windows/jre1.5.0_09/lib/zi/Pacific/Palau
windows/jre1.5.0_09/lib/zi/Pacific/Pitcairn
windows/jre1.5.0_09/lib/zi/Pacific/Ponape
windows/jre1.5.0_09/lib/zi/Pacific/Port_Moresby
windows/jre1.5.0_09/lib/zi/Pacific/Rarotonga
windows/jre1.5.0_09/lib/zi/Pacific/Saipan
windows/jre1.5.0_09/lib/zi/Pacific/Tahiti
windows/jre1.5.0_09/lib/zi/Pacific/Tarawa
windows/jre1.5.0_09/lib/zi/Pacific/Tongatapu
windows/jre1.5.0_09/lib/zi/Pacific/Truk
windows/jre1.5.0_09/lib/zi/Pacific/Wake
windows/jre1.5.0_09/lib/zi/Pacific/Wallis
windows/jre1.5.0_09/lib/zi/SystemV/AST4
windows/jre1.5.0_09/lib/zi/SystemV/AST4ADT
windows/jre1.5.0_09/lib/zi/SystemV/CST6
windows/jre1.5.0_09/lib/zi/SystemV/CST6CDT
windows/jre1.5.0_09/lib/zi/SystemV/EST5
windows/jre1.5.0_09/lib/zi/SystemV/EST5EDT
windows/jre1.5.0_09/lib/zi/SystemV/HST10
windows/jre1.5.0_09/lib/zi/SystemV/MST7
windows/jre1.5.0_09/lib/zi/SystemV/MST7MDT
windows/jre1.5.0_09/lib/zi/SystemV/PST8
windows/jre1.5.0_09/lib/zi/SystemV/PST8PDT
windows/jre1.5.0_09/lib/zi/SystemV/YST9
windows/jre1.5.0_09/lib/zi/SystemV/YST9YDT
---------------------
2006/10/21
tidy up windows batch files for updated nema release
DicomImageViewer.bat
DicomImageViewerWithCDJRE.bat
README
autorun.inf
---------------------
2006/10/21
update image/frame type value 3 common values to match standard
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2006/10/22
Fix [bugs.mrmf] (000261) Remove DicomImageViewer support for multiple sets of dimensions
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
---------------------
2006/10/22
update jmdns to include making the cancel check outside the synchronized block to avoid deadlock, which was left out of the DAC patches to sourceforge cvs version
lib/additional/jmdns.jar
---------------------
2006/10/22
update documentation for 20061022 release of pixelmed and nema
docs/DicomImageViewer/Conformance.doc
docs/DicomImageViewer/Conformance.pdf
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2006/10/23
Fix [bugs.mrmf] (000262) Exception on frame selection array index out of bounds from spectroscopy localizer manager when viewing image
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
---------------------
2006/10/23
[bugs.mrmf] (000263) Localizer image fails to display/repaint until mouse moved out of list of references
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
---------------------
2006/10/23
add classes that were missing from Makefile dependencies
com/pixelmed/display/Makefile
---------------------
2006/10/23
Implement [bugs.mrmf] (000264) Remove possibility of listener leak by using weak references for SelfrefisteringListeners in ApplicationEventDispatcher
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/event/ApplicationEventDispatcher.java
---------------------
2006/10/23
turn off debugging messages
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
---------------------
2006/10/25
add unix shell script version of NetworkMediaImporter
NetworkMediaImporter.sh
---------------------
2006/10/26
add some IPV4 versus IPV6 debugging and compatibility detection in jmdns
lib/additional/jmdns.jar
---------------------
2006/10/26
add some IPV4 versus IPV6 debugging and compatibility detection in jmdns
lib/additional/jmdns.jar
---------------------
2006/10/26
add some IPV4 versus IPV6 debugging and compatibility detection in jmdns
lib/additional/jmdns.jar
---------------------
2006/10/26
add property for network dynamic configuration debug level
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2006/10/26
check for null pointer to avodi exception
com/pixelmed/network/ApplicationEntityMap.java
---------------------
2006/10/26
consider possibility that properties might be present but empty, in which case use default values
com/pixelmed/network/NetworkApplicationProperties.java
---------------------
2006/10/26
consider possibility that properties might be such that cannot determine presentation address for remote query AE
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/10/26
remote query property might be present but empty
com/pixelmed/display/DicomImageViewer.java
---------------------
2006/10/26
go back to just supressing IPV6 AAAA records in jmdns
lib/additional/jmdns.jar
---------------------
2006/10/26
force wait for IPV4 (A) if IPV6 (AAAA) in jmdns
lib/additional/jmdns.jar
---------------------
2006/10/26
force wait for IPV4 (A) if IPV6 (AAAA) in jmdns
lib/additional/jmdns.jar
---------------------
2006/10/26
force wait for IPV4 (A) if IPV6 (AAAA) in jmdns
lib/additional/jmdns.jar
---------------------
2006/11/01
allow more than one DicomImageBlackout panel at the same time; fixes [bugs.mrmf] (000268) DicomImageBlackout fails to scroll if more than one panel open
com/pixelmed/display/DicomImageBlackout.java
---------------------
2006/11/04
always specify encoding of java source files as UTF-8
Makefile.common.mk
---------------------
2006/11/04
always specify encoding of java source files as UTF-8
Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/geometry/Makefile
com/pixelmed/network/Makefile
com/pixelmed/validate/Makefile
---------------------
2006/11/06
Implement [bugs.mrmf] (000269) Need standalone utility that is attribute tree browser from reading file
com/pixelmed/dicom/AttributeTreeBrowser.java
---------------------
2006/11/10
make all should not make clean
com/pixelmed/display/event/Makefile
---------------------
2006/11/10
add task change event
com/pixelmed/display/event/TaskChangeEvent.java
---------------------
2006/11/19
make case insensitivity work on component-by-component basis if necessary, fixes (000270) Following file reference from DICOMDIR fails on Linux when mount point upper case
com/pixelmed/utils/FileUtilities.java
---------------------
2006/11/19
factor out image loading and display from UI setup, in preparation for multiple pages of images or stepping through studies
com/pixelmed/display/MammoImageViewer.java
---------------------
2006/11/30
experiment with convertToMostFavorableImageTypeWithGraphicsDraw
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2006/12/04
Fix (000271) File Meta Information Group Length outside meta header causes parsing to fail; also add dump to main of AttributeList if only single argument
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
---------------------
2006/12/07
tidy up javadoc
com/pixelmed/dicom/AttributeList.java
---------------------
2006/12/07
implement (000272) circular, rectangular and polygonal shutters
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2006/12/14
make validator require Enhanced General Equipment Module (000273)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2006/12/14
Fix validator to check for MultiFrameFunctionalGroupsCommonModule in MR Spectroscopy (000275) and to check for zero values for Rows, Columns, Data Point Rows and Columnds, etc. (000274)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2006/12/14
workaround [bugs.mrmf] (000276) SourceSpectra cannot handle buggy spectra with DataPointColumns or NumberOfFrames of 0, by assuming value of 1 when explicitly 0
com/pixelmed/display/SourceSpectra.java
---------------------
2006/12/14
include image viewer macapp in releaseall
Makefile
---------------------
2006/12/14
add icon for DicomImageViewer macapp
Makefile
icons/DicomImageViewer.icns
---------------------
2006/12/20
update for NEMA CT and MR release
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2006/12/22
Make background values from area outside source image always black; fixes (000277)
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2006/12/23
make icon background transparent
icons/DicomImageViewer.icns
---------------------
2007/01/08
add link to local hard drive pictures folder for testmammohome
com/pixelmed/display/Makefile
---------------------
2007/01/09
use correct path to additional jar files for reading DICOM files, do not make dependent on makefile itself else recompiles every time; make all before including comment else makes clean if no argument
com/pixelmed/validate/Makefile
---------------------
2007/01/09
make all before including comment else makes clean if no argument
com/pixelmed/database/Makefile
com/pixelmed/display/event/Makefile
com/pixelmed/event/Makefile
com/pixelmed/geometry/Makefile
com/pixelmed/query/Makefile
com/pixelmed/scpecg/Makefile
com/pixelmed/server/Makefile
com/pixelmed/transfermonitor/Makefile
com/pixelmed/utils/Makefile
com/pixelmed/web/Makefile
---------------------
2007/01/17
Use dimension label rather than tag name in instance sort order panel when available; much better for private dimensions (000278)
com/pixelmed/display/SourceInstanceSortOrderPanel.java
---------------------
2007/01/17
supress Specific Character Set in filter panel (000279); allow UIDs in filter panel (000280)
com/pixelmed/query/FilterPanel.java
---------------------
2007/01/17
support Modalities and SOP Classes in Study as matching as well as return keys (000281)
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
---------------------
2007/01/17
add SOP Classes in Study as query key to viewer (000282)
com/pixelmed/display/DicomImageViewer.java
---------------------
2007/01/25
Fix (000283) UnsignedLong attribute string values are being sign extended
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/UnsignedLongAttribute.java
---------------------
2007/01/25
make validator warn when coding scheme version is present unexpectedly (000284)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/01/25
make validator check enhanced contrast/bolus module (000285)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/01/25
make validator warn when coding scheme version is present unexpectedly (000284) and check enhanced contrast/bolus module (000285)
docs/DicomImageViewer/ReleaseNotes.doc
docs/DicomImageViewer/ReleaseNotes.pdf
---------------------
2007/01/29
Fix (000286) validator should only report pixel spacing of zero as error when rows or columns greater than one
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/02/02
make attribute read override explicit VR with known dictionary VR (000288)
com/pixelmed/dicom/AttributeList.java
---------------------
2007/02/02
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/02/02
make attribute read override explicit VR with known dictionary VR (000288)
com/pixelmed/dicom/AttributeList.java
---------------------
2007/02/04
convert from macRoman to UTF-8 source file encoding
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section3.java
---------------------
2007/02/22
Fix (000289) Mammo image viewer shows incorrect row orientation annotation when on left not right side of display
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/02/24
Add ability to store and transfer private storage SOP Classes using GE PET Raw Data as an example (000290)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2007/02/24
update data dictionary from dicom3tools 1.00.snapshot.20070204 version
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2007/02/24
add private GE 3D model storage sop class
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2007/03/02
Fix (000291) InformationEntity in dictionary is wrong when series/instance/frame conflicts
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2007/03/07
make validator check FunctionalGroupPointer required only when DimensionIndexPointer not a functional group (000292)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/03/17
update data dictionary (new data elements, revised information entity mapping)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2007/03/19
add linear distance measurement to mammo viewer
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
---------------------
2007/03/21
add full name not just keyword to java dictioanry (000294)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/21
back out incorrectly tagged spacing changes
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/21
use estimated radiographic magnification factor for spacing (000295)
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/22
improve example of query in C-FIND SCU and add optional debug level to command line
com/pixelmed/network/FindSOPClassSCU.java
---------------------
2007/03/22
Add a shorthand method to add new attributes and values to an attribute list (e.g., for query identifiers) (000298)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/network/FindSOPClassSCU.java
---------------------
2007/03/25
show ellipses in CAD (000299)
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/25
diagnostics on image flip
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DisplayedAreaSelection.java
---------------------
2007/03/25
do not vertically flip SIO views - treat like MLOs and keep feet at bottom (000301)
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/25
temporary workaround for mammo viewer vertical image flip (000302)
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/26
Have mammo viewer recognize and annotate obsolete exaggerated view codes (000303)
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/03/28
make Specific Character Set handle (illegal) Big5 from Taiwan (000306); requires ability to get original bytes of string value from attribute list read
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
---------------------
2007/03/28
add layout support for 4 views with modifer and 4 without (same study date)
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/04/01
Do not fail entire attribute or list read just because unsupported encoding exception occurs in a string (000307); also describe in the docs the problem with default JRE installation sometimes not installing charsets.jar needed for some extended character sets
README
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
---------------------
2007/04/03
tidy up some logging comments in mammo viewer, and include comment relating file to view abbreviation
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/04/03
add support for new Pixel Padding Value Range Limit attribute when windowing (000308)
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2007/04/03
explicitly clean up listeners to avoid weak references hanging around when DicomImageBlackout is disposed off (e.g., in successive instances of it (000309)
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/04/04
add (primitive) mechanism to display number of files blacked out and total (000310)
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2007/04/04
change IE for Institution Name back to series instead of instance (000311)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2007/04/04
add path to DicomImageBlackout.bat in order to find JAI codecs
DicomImageBlackout.bat
---------------------
2007/04/05
add hebrew name example to charsettest, use caret form of arabic name and change order of family and first name, make archive for web site in make target
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2007/04/06
make SpecificCharacterSet detect ISO 2022 defined terms when used as first value (000312)
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2007/04/10
add java webstart for sample applications
Makefile
webstart/DicomImageViewer.html
webstart/DicomImageViewer.jnlp
---------------------
2007/04/12
webstart/DicomImageViewer.jnlp
---------------------
2007/04/12
Remove xmlpack since no longer needed with jre >= 1.5 (000313),(000063)
DicomImageBlackout.bat
DicomImageViewer.bat
DicomImageViewer.sh
DicomImageViewerWithCDJRE.bat
Makefile
Makefile.common.mk
MammoImageViewer.bat
README
validate.sh
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/validate/Makefile
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
lib/jwsdp/dom.jar(DEAD)
lib/jwsdp/jaxp-api.jar(DEAD)
lib/jwsdp/sax.jar(DEAD)
lib/jwsdp/xalan.jar(DEAD)
lib/jwsdp/xercesImpl.jar(DEAD)
---------------------
2007/04/12
add webstart files to source release
Makefile
---------------------
2007/04/18
Allow StorageSOPClassSCPDispatcher.main() to be used with properties or defaults rather than command line arguments, e.g., for Java WebStart; includes refactoring of federated startup and registration with dns-sd, as well as making some property names public (000315)
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2007/04/18
tidy up javadoc
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2007/04/19
factor out use of federatedNetworkApplicationInformation.startupAllKnownSourcesAndRegister() to include web server (and wado registration); add PrimaryDeviceType property for listener (as well as remote nodes)
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/Makefile
com/pixelmed/server/testserver.properties
---------------------
2007/04/19
MammoImageViewer.sh
---------------------
2007/04/20
retrieve all patients/studies in query results, not just one selected (000317)
com/pixelmed/display/DicomImageViewer.java
---------------------
2007/04/20
remove xmlpack dependency
validate.sh
---------------------
2007/05/01
add capability to describe graphics environment
com/pixelmed/display/DescribeGraphicsEnvironment.java
---------------------
2007/05/01
add capability to describe graphics environment
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/Makefile
---------------------
2007/05/02
add forceFitEntireMatrixToWindow and comment it out
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/05/15
do not override explicit UN VR with dictionary VR if SQ (fixes (000323))
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2007/05/15
do not use specificCharacterSetByteValues without checking for null, which may occur when constructor called with single (String) argument, fix for problem exposed by (000324) though underlying cause fixed by (000312)
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2007/05/15
add cvs folders and files for DicomImageViewer.app
DicomImageViewer.app/Contents/Info.plist
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2007/05/15
add cvs folders and files for DicomImageViewer.app
DicomImageViewer.app/Contents/PkgInfo
---------------------
2007/05/15
dumpcvslog.sh
---------------------
2007/05/26
add commons-codec-1.3.jar to ECGViewer release archive
Makefile
---------------------
2007/05/26
add main method to MediaImporter capability to check media contents without doing any importing (to console or dialog box) (000326)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/display/Makefile
icons/DicomImageViewer.png
---------------------
2007/06/11
update JAI JIIO pure Java codec to Linux EA 1.1 and remove native codecs
lib/additional/clib_jiio.dll(DEAD)
lib/additional/clib_jiio_sse2.dll(DEAD)
lib/additional/clib_jiio_util.dll(DEAD)
lib/additional/clibwrapper_jiio.jar(DEAD)
lib/additional/jai_imageio.jar
---------------------
2007/06/11
add JAI JIIO pure Java codec (only) to DicomImageViewer shell script
DicomImageViewer.sh
---------------------
2007/06/11
add JAI JIIO codec extension to web start for image viewer (using our own modified version of Sun's JNLP
webstart/DicomImageViewer.jnlp
webstart/jai-imageio-1.1.jnlp
---------------------
2007/06/11
add JAI JIIO codec extension to web start for image viewer (using our own modified version of Sun's JNLP
webstart/jai-imageio-1.1.jnlp
---------------------
2007/06/11
get pixel size information
com/pixelmed/display/DescribeGraphicsEnvironment.java
---------------------
2007/06/14
Make JIIO codecs work from web start on Mac by using ImageIO.scanForPlugins() (000327)
com/pixelmed/dicom/AttributeList.java
---------------------
2007/06/14
use our own JIIO extension for JIIO in web start until Brian includes generic or Mac-specific resource in his one
webstart/DicomImageViewer.jnlp
webstart/jai-imageio-1.1_DAC.jnlp
---------------------
2007/06/22
Begin work on extracting anatomic classification from various image header attributes for projection x-ray (000328)
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/NOTES
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/anatproc/codefragment.txt
com/pixelmed/anatproc/snomed.txt
com/pixelmed/anatproc/table.txt
---------------------
2007/06/22
Factor out string array dump methods from wado request into utils class
com/pixelmed/utils/StringUtilities.java
com/pixelmed/web/WadoRequest.java
---------------------
2007/06/24
also look for longest entry, check entire entries first then look for contained, check synonyms as well as code meaning
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/04
Allow external SQL access to database in servers and display applications (000329)
Makefile
sample.com.pixelmed.display.DicomImageViewer.properties
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/Makefile
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/graymax.properties
com/pixelmed/server/testserver.properties
---------------------
2007/07/04
tidy up javadoc
com/pixelmed/dicom/MediaImporter.java
---------------------
2007/07/04
tidy up README to reflect current state of dependencies
README
---------------------
2007/07/04
describe cleaning in sub-directories
Makefile
---------------------
2007/07/04
check more attributes and skip empty strings (including all spaces) and check code meaning when codes themselves are unrecognized
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/04
Make DicomAndWebStorageServer extensible with alternative database information models (000330)
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/testserver.properties
---------------------
2007/07/04
add jpedal to dependency release file (000331)
Makefile
---------------------
2007/07/08
include PerformedProtocolCodeSequence and PerformedProcedureStepDescription, exclude bad words, add more synonyms
com/pixelmed/anatproc/NOTES
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/08
include PerformedProtocolCodeSequence and PerformedProcedureStepDescription, exclude bad words, add more synonyms
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/08
remove inadvertantly committed experiments with collatorToCollapseAccents
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/08
attempt to match independent of accents; clean up log messages
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/NOTES
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/08
add more translations and convert SNOMED ID into CUI
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/10
more synonyms in different languages
com/pixelmed/anatproc/NOTES
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/10
Assume Latin 1 when non-ASCII byte values in supposedly ASCII-only character set (000332)
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2007/07/10
add utility to dump Unicode code points of String
com/pixelmed/utils/HexDump.java
---------------------
2007/07/10
convert accents BEFORE removing all non-letters, which was removing accented letters, and remove non-Unicode letters not non-ASCII letters
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/10
factor out concept dictionary, add search for view and laterality, add exact match for code string equivalent, do not automatically use code string equivalent as synonym
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/10
insert unpaired laterality if unpaired anatomy
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/10
check in Protocol Name
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/10
make concept dictionaries self-describing, so that general attribute search messages can be more specific
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/11
more synonyms
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/11
more synonyms
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/11
check for laterality in ViewPosition
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/13
NOTES
com/pixelmed/anatproc/NOTES
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/13
add check for bad phrases to exclude body parts in strings like 'history of breast ca'
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2007/07/13
add string utility method to check for contains one of an array of strings
com/pixelmed/utils/StringUtilities.java
---------------------
2007/07/17
add utility class to enter AE configuration in dialog box
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/Makefile
---------------------
2007/07/20
update to more recent jpedal pdf library
Makefile
README
com/pixelmed/dicom/Makefile
---------------------
2007/07/20
com/pixelmed/display/DescribeGraphicsEnvironment.java
---------------------
2007/07/20
allow mammo viewer to use externally supplied JFrames
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/07/22
Since JPedal is GPL should not be required for compilation from source; wrap it with reflection to detect during runtime execution (000333)
Makefile
README
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
---------------------
2007/07/23
excalibur-bzip2 jar is not be needed for compile since invoked by reflection (000334); also remove some unnecessary imports of it
Makefile.common.mk
README
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2007/07/23
Invoke commons-codec for phonetic matching by reflection to avoid need for it during compile, and do not fail if unavailable (000335)
Makefile.common.mk
README
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
---------------------
2007/07/24
make mammo viewer reusable by adding clear() method and empty constructor
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/07/27
Clarify QueryInformationModel.performHierarchicalMove() into default, from, to and from-to methods (000335)
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/query/QueryInformationModel.java
---------------------
2007/07/27
Factor our javac options into common included Makefile, and use lint flags
Makefile.common.mk
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/geometry/Makefile
com/pixelmed/network/Makefile
com/pixelmed/validate/Makefile
---------------------
2007/07/27
add user control over flip/rotate, justify and fit to window
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/07/28
Auto-install JRE if not present
webstart/DicomImageViewer.html
---------------------
2007/07/28
webstart/NOTES
---------------------
2007/07/29
forgot to include in cvs when added
com/pixelmed/display/DialogMessageLogger.java
---------------------
2007/07/30
load images using ClassLoader if available, to help with mammo presentation for RSNA
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/07/30
explicitly deconstruct SingleImagePanels to avoid zombie event listeners on garbage collection
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/07/30
make dynamic network discovery working for DicomImageViewer Mac application by adding to property list (000336)
DicomImageViewer.app/Contents/Info.plist
---------------------
2007/07/30
remove xmlpack from DicomImageViewer Mac application property list since no longer used as of JSE5
DicomImageViewer.app/Contents/Info.plist
---------------------
2007/08/01
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/08/01
tidy up choice of class loader ... use Thread.getContextClassLoader() everywhere (000336)
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PhoneticStringEncoder.java
---------------------
2007/08/01
shadow strings and text everywhere (000337)
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/TextAnnotationPositioned.java
---------------------
2007/08/01
factor out cross-drawing methods into utility class, and draw SR-related crosses with a gap of specified size in center (000338)
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/08/06
tidy up javadoc
com/pixelmed/display/TextAnnotationPositioned.java
---------------------
2007/08/06
make compiled java code target explicit to 1.5 in case compiled with 1.6 compiler
Makefile.common.mk
---------------------
2007/08/09
Stop DicomDirectory reader failing with NullPointerException if LowerLevelDirectoryOffset absent (000342)
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/Makefile
---------------------
2007/08/09
be less verbose when parsing and federating network properties and information
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationProperties.java
---------------------
2007/08/28
CP 744 DiffusionBMatrixSequence
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/08/28
CP 747 Clinical Trial Series attributes
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/08/28
CP 763 CT Calibration Factors for the Mass Score of the Calcium Scoring
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/08/28
CP 764 CTDI Phantom Type Code Sequence
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2007/09/25
begin work on VOI LUT Data application to image display (000314)
com/pixelmed/dicom/VOITransform.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2007/09/25
allow VOI LUT to be windowed
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2007/09/25
allow VOI LUT to be windowed using specified idenity window values corresponding to size and offset of LUT
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2007/09/27
Have C-MOVE SCP return IdentifierDoesNotMatchSOPClass rather than throwing SQL exception when missing QueryRetrieveLevel in request identifier (000344)
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
---------------------
2007/10/12
Fix Supplemental Palette Color LUT application, broken when implementing VOI LUT (00345)
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/11/05
supress some logging messages
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2007/11/06
separate side/view markers from other annotations and make larger (000349)
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/11/15
use certified jar signer
Makefile
---------------------
2007/11/17
improve documentation of XML representation of DICOM objects; add command line utility to perform XPath queries on XML files
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/XPathQuery.java
---------------------
2007/11/17
more work on xml documentation
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/utils/Makefile
---------------------
2007/12/01
tidy up javadoc
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2007/12/01
remove gantry, plate, cassette, generator, detector ID during deidentification (000349)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2007/12/09
activate console feedback about initial window choice
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/09
add support for Chinese non-standard GBK and GB2312 values of Specific Character Set (000352)
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2007/12/10
add test ecg files
com/pixelmed/displaywave/1074466202.fixed.dcm
com/pixelmed/displaywave/39da47b7.dcm
com/pixelmed/displaywave/PFE105.dat
com/pixelmed/displaywave/PFE105.readme.txt
com/pixelmed/displaywave/PFE105_high.scp
com/pixelmed/displaywave/PFE105_redred.scp
---------------------
2007/12/19
com/pixelmed/display/MammoImageViewer.java
---------------------
2007/12/19
make received file path strategy extensible and extend its use to other database importer actions that involve a local copy of a file
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/Makefile
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2007/12/19
replace deprecated show() with setVisible(true)
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/scpecg/SCPECG.java
---------------------
2007/12/27
prevent resampling code from wrapping around to next line when area beyond right edge of image is displayed (000354)
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2007/12/27
update copyright notice date and remove commented out imports
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2007/12/27
add limited panning capability based on key modifier (alt) whilst left mousing (000161 partial)
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/27
trace events leading to repaint, time painting
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/27
factor out other uses of dirty() to invalidate cache; rename cachedResizedImage to cachedResizedSelectedRegionImage in preparation for separating resizeng from selection
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/27
improve panning speed by resampling entire image once and then selecting subimage for painting
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/27
ensure that resized window causes resampled resized image to be recreated (was broken by panning optimization
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/27
factor our definition of home directory for paths to test objects
Makefile.common.mk
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/validate/Makefile
---------------------
2007/12/27
explicitly check for window size change before flushing cache and causing resampling
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/27
add 'display reset' command (keyboard R) to restore initial window/zoom/pan state (000355)
com/pixelmed/display/SingleImagePanel.java
---------------------
2007/12/31
add 1:1 display:image pixel size request in SingleImagePanel to support mammo viewer (000356); implemented by amending DisplayedAreaSelection to store and implement explicit (non-pixel-spacing based) magnification ratio and using it during shaping to window size (000356)
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/01/12
put back plain dirty() call ... used by DicomImageBlackout class ... same as dirtySource()
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/01/12
add dictionary and relevant IOD changes from 2007 to 2008 supplements and CPs
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2008/01/15
Throw a specific exception when file type is unrecognized and read returns no image, rather than null pointer exception (000357)
com/pixelmed/dicom/ImageToDicom.java
---------------------
2008/01/15
Handle images of different bit depths and number of samples, including 16 bit grayscale, not just 8 bit RGB (000358)
com/pixelmed/dicom/ImageToDicom.java
---------------------
2008/01/15
test ImageToDicom headless
com/pixelmed/dicom/Makefile
---------------------
2008/01/17
add utility method to get value of named attribute of a node
com/pixelmed/utils/XPathQuery.java
---------------------
2008/01/17
check JIIO metadata to try to determine appropriate bit depth
com/pixelmed/dicom/ImageToDicom.java
---------------------
2008/01/17
factor out image pixel module creation from secondary capture instance creation, to allow reuse of the former in other classes
com/pixelmed/dicom/ImageToDicom.java
---------------------
2008/01/18
allow consumer image format converter to make use or pre-existing list of image pixel module attributes
com/pixelmed/dicom/ImageToDicom.java
---------------------
2008/01/18
add conversion from Amicas JPEG 2000 format to DICOM (000359)
Makefile
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/Makefile
---------------------
2008/01/18
com/pixelmed/utils/FileUtilities.java
---------------------
2008/01/20
experiment with configurable interactive drawing shapes in Mammo viewer
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
---------------------
2008/01/20
fix unpredictable window resize behavior by forcing refit or original diplayed area selection (or whole image if none) (000361)
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/01/20
increase memmory for mammo app tests to permit zoom
com/pixelmed/display/Makefile
---------------------
2008/01/20
catch Throwable rather than Exception to catch NoClassDefFoundError when no vecmath while trying to getGeometryOfVolume in DicomImageViewer (000363)
com/pixelmed/display/DicomImageViewer.java
---------------------
2008/01/20
finish dialog box version of Amicas convertor
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/Makefile
---------------------
2008/01/20
tidy up javadoc for convertors
Makefile
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2008/01/20
supress doxygen release, since broken on Leopard
Makefile
---------------------
2008/01/20
make blackout work again - was broken by changing from Rectangle to Rectangle2D in SingleImagePanelWithRegionDrawing.makeNewDrawingShape() - make neutral by using common parent RectangularShape (000364)
com/pixelmed/display/ImageEditUtilities.java
---------------------
2008/01/20
add blackout test that uses > 8 bits (since code paths different)
com/pixelmed/display/Makefile
---------------------
2008/01/20
add changelog that uses cvsps
Makefile
---------------------
2008/01/20
update cvsps chache (-u option) when making changelog
Makefile
---------------------
2008/01/24
tidy up javadoc
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2008/01/24
update host AE for tests
com/pixelmed/query/Makefile
---------------------
2008/01/24
supress messages on database shutdown compact
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2008/01/24
Add utility to synchronize local database from remote SCP (000367)
Makefile
com/pixelmed/apps/Makefile
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/query/QueryInformationModel.java
---------------------
2008/01/29
allow access to status of C-MOVE SCU
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/network/MoveSOPClassSCU.java
---------------------
2008/01/29
have synchronizer self-register local port with Bonjour; tidy up javadoc
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/package.html
---------------------
2008/01/30
Greater precision for OrganDose annotation (000368)
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2008/02/02
gracefully handle DICOMDIRs that contain illegal empty Referenced File IDs (000370)
com/pixelmed/dicom/DicomDirectory.java
---------------------
2008/02/17
Suppress printing of stack trace when exception caused during creation of attribute (000371)
com/pixelmed/dicom/AttributeFactory.java
---------------------
2008/02/18
add test main method to StructuredReport class that dumps contents to console (000373)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StructuredReport.java
---------------------
2008/02/18
factor out some more utility methods related to attributes and attribute lists inside first item of sequences
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2008/02/18
When making SR content items and XML representation, support waveforms and temporal coordinates, allow sub-classing of ContentItemFactory (not use private members), and complete additional attributes of image content items (000374)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/02/18
update doxygen config file to 1.5.4 version, and redeploy since working now on Leopard
Doxyfile
Makefile
---------------------
2008/02/20
define and implement setValue() for all Attribute classes and scalar types, and implement removeValue() for all Attribute classes (000375)
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2008/02/20
define and implement setValue() for all Attribute classes and scalar types, and implement removeValue() for all Attribute classes (000375); add method to add already created SequenceItem
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2008/02/20
make AET optional when creating file meta information (000376)
com/pixelmed/dicom/FileMetaInformation.java
---------------------
2008/02/20
Add method to attribute factory to use dictionary to figure out VM (000377); requires making static global dictionary (currently in AttributeList) available publicly
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
---------------------
2008/02/20
Extend DicomDirectory with constructor to build new DICOMDIR from set of files, and add main method to do that (000266); requires adding mechanisms to keep track of byte offset when writing output stream, as well as null output stream to make a first pass to determine physical byte offsets; only IMAGE instance directory records implemented so far
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/SequenceItem.java
---------------------
2008/02/21
extend DICOMDIR creation to support SR and KO records (more 000266); required adding KO record type to directory infrastructure
Doxyfile
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
---------------------
2008/02/22
extend dicom directory support creation to support remaining types of directory records (more 000266)
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
---------------------
2008/02/22
Factor out directory record type strings into separate class (more 000266)
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/Makefile
---------------------
2008/02/22
tidy up javadoc
com/pixelmed/transfermonitor/MonitoredOutputStream.java
---------------------
2008/02/22
updated dat on copuright notice
COPYRIGHT
---------------------
2008/02/29
Add a method to test whether or not a file is a DICOM file (especially if it has no meta information header) (000380)
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/Makefile
---------------------
2008/03/04
tudy up javadoc
com/pixelmed/dicom/DicomFileUtilities.java
---------------------
2008/03/11
add support for Siemens private SOP Class (000382)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2008/03/11
allow setting spacing without activating zoom factor display
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/03/11
add constructor without geometry, to support projection images
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2008/03/11
add simple side-by-side frontal chest x-ray viewer, to support NIOSH presentation, derived from mammo viewer
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/Makefile
---------------------
2008/04/04
Amicas conversion should not add SpecificCharacterSet if empty (i.e., ASCII) (000383)
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2008/04/04
Amicas conversion should add empty Acquisition Number (000384)
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2008/04/06
Make AttributeList.write() honor request for deflate or bzip2 transfer syntax (000385)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/SequenceItem.java
---------------------
2008/04/06
Add AttributeList.write() convenience methods that take single file or filename argument (000386)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/04/06
Make AttributeList.toString() show names from dictionary by default (000387)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/04/06
Make AttributeList.write() honor request for deflate or bzip2 transfer syntax (000385); tidy up DicomStreamCopier whilst at it
com/pixelmed/dicom/DicomStreamCopier.java
---------------------
2008/04/06
Begin to add ability to construct Structured Reports and Content Items from scratch (000388)
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/StructuredReport.java
---------------------
2008/04/07
Add support for qualifier in NumericContentItem for NaN, etc. (per CP 260) (000389)
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2008/04/07
Add support for qualifier in NumericContentItem for NaN, etc. (per CP 260) (000389)
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/04/07
Add support for qualifier in NumericContentItem for NaN, etc. (per CP 260) (000389)
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2008/04/10
add or extend Contributing Equipment Sequence whilst deidentifying (000390)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/Makefile
---------------------
2008/04/10
add or extend Contributing Equipment Sequence whilst deidentifying (000390)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2008/04/16
make tidy output quiet
com/pixelmed/dicom/Makefile
---------------------
2008/04/16
add template stuff and SOP Class UID to XML of SR (000391); elide XML attributes when empty
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/04/16
Numerically label child nodes in SR dump (000392)
com/pixelmed/dicom/StructuredReport.java
---------------------
2008/04/16
include referenced content items in XML of SR (000393)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/04/16
use period not backslash as delimiter for referenced content item identifier in internal representations, dumps and XML (000394)
com/pixelmed/dicom/ContentItem.java
---------------------
2008/04/16
use id and idref attributes to cross-link referenced content items (000395)
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/04/16
use id and idref attributes to cross-link referenced content items (000395) - make attribute names uppercase
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/04/16
Start work on validating SR content item structure against IOD constraints (000396)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/Makefile
---------------------
2008/04/16
More work on validating SR content item structure against IOD constraints (000396) - describe content items with numeric identifiers, distinguish reference relationships, follow references to check and describe child
Makefile
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2008/04/16
More work on validating SR content item structure against IOD constraints (000396) - factor our common rules, since running into xsltc translet size limit (http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=5056688)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2008/04/16
More work on validating SR content item structure against IOD constraints (000396) - add more IODs and test for KOS
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2008/04/16
More work on validating SR content item structure against IOD constraints (000396) - add more IODs
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2008/04/16
More work on validating SR content item structure against IOD constraints (000396) - add more IODs
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2008/04/17
More work on validating SR content item structure against IOD constraints (000396) - finish remaining IODs and reorder output message to parent, relationship then child
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2008/04/27
fix network receive failure caused by closing DicomOutputStream when working in deflate/bzip2 output (000398)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
---------------------
2008/04/27
include C-MOVE identifier in debugging output
com/pixelmed/network/MoveSOPClassSCU.java
---------------------
2008/04/27
add simple test for send/receive
com/pixelmed/network/Makefile
com/pixelmed/network/runprocessinbackground.sh
---------------------
2008/04/27
Add reference in javadoc for isSRDocument() to SOPClass.isStructuredReport(), since method depends on Content Sequence presence, which may theoretically be absent in an empty SR (000399)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/04/28
Treat illegal rescale slope of zero as identity (000400)
com/pixelmed/dicom/ModalityTransform.java
---------------------
2008/05/06
remove group lengths inside sequence items (000401)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/05/11
add constructor to read from file to SourceImage (000403)
com/pixelmed/display/SourceImage.java
---------------------
2008/05/11
add main method for testing to SingleImagePanel that displays a single image from a file (000404)
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/05/11
add javadoc to SingleImagePanel that describes how to display a single image from a file
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/05/12
add javadoc to SingleImagePanel that describes how to display a single image from a file
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/05/16
suppress timing messages
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/05/16
add new ContentItem.getReferencedContentItemIdentifierArray() method and use it in StructuredReport.findAllContainedSOPInstances() and use period rather than backslash as delimiter when parsing referenced content item identifiers, which restores ability to show CAD marks in MammoImageViewer (000405) that was broken by change of delimiter for (000394)
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2008/05/23
add operator identification in ContributingEquipmentSequence (000406); requires addition of support for PersonIdentificationMacro and ability to getArrayOfCodedSequenceItems
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PersonIdentification.java
---------------------
2008/05/28
simplify javadoc about calling list.read()
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2008/05/28
Add support for ISO 2022 GBK (000407)
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2008/06/06
Prevent full screen calls in MammoImageViewer from crashing application in Java 6 on Mac due to missing NS.setMenuBarVisible() (000408)
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2008/06/07
Work on, but no solution for, (000409) Tabbed pane in DicomImageViewer selects when scrolling on Mac
com/pixelmed/display/DicomImageViewer.java
---------------------
2008/06/14
show display pixel size information for both row and column
com/pixelmed/display/DescribeGraphicsEnvironment.java
---------------------
2008/06/23
add a few more webstart entry points
Makefile
webstart/DicomImageBlackout.html
webstart/DicomImageBlackout.jnlp
webstart/MediaImporter.html
webstart/MediaImporter.jnlp
---------------------
2008/06/27
Amicas converter should log actions to window when invoked with no args and file chooser dialogs (000414)
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/ScrollingTextAreaWriter.java
---------------------
2008/06/27
Amicas converter should log actions to window when invoked with no args and file chooser dialogs (000414)
webstart/ConvertAmicasJPEG2000FilesetToDicom.html
webstart/ConvertAmicasJPEG2000FilesetToDicom.jnlp
---------------------
2008/06/28
update data dictionary and validator with FT CPs from June 2008 WG6
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2008/06/28
remove all issuers and admission related identifiers
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2008/06/30
turn off debugging message
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/06/30
factor out initial message for status bar using release string and build date to ApplicationFrame
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2008/06/30
use line drawing version of SingleImagePanel to allow measurements, and use ImagerPixelSpacing unless PixelSpacing is present (assuming latter overrides and is calibrated)
com/pixelmed/display/DicomImageViewer.java
---------------------
2008/06/30
more debugging messages in query
com/pixelmed/query/QueryTreeRecord.java
---------------------
2008/06/30
add constructor for browser that populates Containers, not just JFrames (for use in DicomCleaner)
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/query/QueryTreeBrowser.java
---------------------
2008/06/30
provide a name for each database to be used as the root in tree models
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
---------------------
2008/06/30
Add application to query, retrieve, import, clean and send studies, series and instances
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/Makefile
---------------------
2008/06/30
add specific message when child query returns no children and tree model throws exception - not really a fix for (000415) but detects the use case; also make private stuff protected so can be sub-classed
com/pixelmed/query/QueryTreeRecord.java
---------------------
2008/06/30
In query tree browser show AET as root node (000416)
com/pixelmed/query/QueryTreeModel.java
---------------------
2008/07/02
add webstart icons to cvs
webstart/icons/ConvertAmicasJPEG2000FilesetToDicom.png
webstart/icons/DicomImageBlackout.png
webstart/icons/DicomImageViewer.png
webstart/icons/MediaImporter.png
---------------------
2008/07/02
add DicomCleaner webstart entry
Makefile
webstart/DicomCleaner.html
webstart/DicomCleaner.jnlp
webstart/icons/DicomCleaner.png
---------------------
2008/07/02
tidy up javadoc
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2008/07/02
add DICOMDIR constructor that allows root directory for files to be specified rather than depending on current directory, and support it in the main() method (000410)
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/Makefile
---------------------
2008/07/02
change message to console reporting adding files to DICOMDIR
com/pixelmed/dicom/DicomDirectory.java
---------------------
2008/07/02
add export to files with DICOMDIR to DicomCleaner
com/pixelmed/display/DicomCleaner.java
---------------------
2008/07/02
keep/remove descriptions action was reversed in DicomCleaner
com/pixelmed/display/DicomCleaner.java
---------------------
2008/07/02
add example DicomCleaner properties file to webstart
webstart/example.com.pixelmed.display.DicomCleaner.properties
---------------------
2008/07/04
upgrade to post-2.0 cvs version of jmdns modified as described in README - still has some deadlock on close problems
README
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
lib/additional/jmdns.jar
---------------------
2008/07/18
reorder Makefile to make all OBJS rather than clean
com/pixelmed/displaywave/Makefile
---------------------
2008/07/18
constain attribute tree panel size to be fixed width, and height based on other panels (i.e., ECG panel); list file name to console when loading
com/pixelmed/displaywave/ECGViewer.java
---------------------
2008/07/18
log waveform data attribute value (commented out)
com/pixelmed/displaywave/DicomSourceECG.java
---------------------
2008/07/18
add webstart for ECGViewer
webstart/ECGViewer.html
webstart/ECGViewer.jnlp
---------------------
2008/07/20
do not add NumberOfFrames when performing blackout unless needed (000418)
com/pixelmed/display/ImageEditUtilities.java
---------------------
2008/07/20
do not add NumberOfFrames when performing blackout unless needed (000418)
com/pixelmed/display/ImageEditUtilities.java
---------------------
2008/07/30
Make AttributeFactory create SequenceAttribute rather than UnknownAttribute for SQ VR (000419)
com/pixelmed/dicom/AttributeFactory.java
---------------------
2008/08/07
start work on round trip of XML SR representation to DICOM encoding - sufficient for encoding simple annotations on images not all content item types completed yet (000421)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2008/08/14
do not give up parsing dataset when one bad attribute with VL mismatch for VR (000422)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2008/08/14
dynamically invoke ServiceInfoImpl constructor to avoid requirement for jmdns.jar in classpath for DicomImageViewer to run (000423)
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
---------------------
2008/08/14
work around bug in standard Sun JPEG reader hanging on extended (>8 bit) lossy JPEG by checking for reader and not attempting to use it (000424)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/08/18
correct handling of encapsulated pixel data within fixed length IconImageSequence in compressed transfer syntax, by absorbing trailing SequenceItemDelimiter belonging to encapsulated data, and keeping tracl of byte offset used in EncapsulatedInputStrem (000426)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2008/08/18
make ContentItem constructors with parent add to child list of parent (000427)
com/pixelmed/dicom/ContentItem.java
---------------------
2008/08/19
assume JPEG when illegal encapsulated JPEG in Implicit Transfer Syntax rather than giving up (does not yet look ahead into bitstream to choose IIO reader more selectively) (000428)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/08/22
Add support for overlays in OverlayData (000078)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/Overlay.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2008/08/22
Add support for overlays in PixelData stored in memory (but not stored on disk) (000078)
com/pixelmed/dicom/Makefile
---------------------
2008/08/22
Add shadow when drawing overlays (000078)
com/pixelmed/display/SingleImagePanel.java
---------------------
2008/08/22
rename parameter to reflect that it applies not only to pixel data
com/pixelmed/dicom/AttributeFactory.java
---------------------
2008/08/22
overlays are only in even groups; also detect whether or not there is anything in an overlay
com/pixelmed/dicom/Overlay.java
---------------------
2008/08/22
dictionary was missing elements in repeating groups; add specific code to accessors to detect for repeating group base (000430)
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/TagFromName.java
---------------------
2008/09/02
add ability to turn display of overlays on and off (000429)
com/pixelmed/dicom/Overlay.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
---------------------
2008/09/02
add support for choosing the least complex SpecificCharacterSet based on the string values in an AttributeList, and use it for queries (000432)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2008/09/02
add ability to turn display of overlays on and off (000429)
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
---------------------
2008/09/02
tidy up javadoc
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2008/09/02
Add support for veterinary annotations (000433) and X-Ray modality annotations (000434)
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2008/09/02
tidy up javadoc
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
---------------------
2008/09/11
tidy up webstart folder creation, make all webstart pages autoinstall java, and add links to properties file from usage html files where necessary
Makefile
sample.com.pixelmed.display.DicomCleaner.properties
webstart/DicomCleaner.html
webstart/DicomCleanerUsage.html
webstart/DicomImageViewerUsage.html
webstart/MediaImporter.html
---------------------
2008/09/11
tidy up javadoc
com/pixelmed/display/DicomCleaner.java
---------------------
2008/09/11
remove various files not used any more
lib/additional/14_os_jpedal.jar(DEAD)
webstart/example.com.pixelmed.display.DicomCleaner.properties(DEAD)
webstart/jai-imageio-1.1.jnlp(DEAD)
---------------------
2008/09/11
add mac app bundle for DicomCleaner
Makefile
DicomCleaner.app/Contents/Info.plist
DicomCleaner.app/Contents/PkgInfo
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
---------------------
2008/09/11
ensure that folders in macapp package exist before copying into them
Makefile
---------------------
2008/09/11
describe name of properties file required in home directory
webstart/DicomCleanerUsage.html
webstart/DicomImageViewerUsage.html
---------------------
2008/09/11
avoid intermittent hanging when using jmdns and closing application
README
---------------------
2008/09/11
avoid intermittent hanging when using jmdns and closing application
README
lib/additional/jmdns.jar
---------------------
2008/09/12
add blackout to cleaner (000436)
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
---------------------
2008/09/15
add class and method to determine if patient is an animal
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/Veterinary.java
---------------------
2008/09/23
provide for correcting Photometric Interpretation when color and compressed transfer syntax have been read, before writing AttributeList, and replace ImageEditUtilities.sanitizePhotometricInterpretation() that used transfer syntax to try to determine this, and the corresponding TransferSyntax characteristic (000437)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2008/09/23
allow import of compressed images in DicomCleaner (000438)
com/pixelmed/display/DicomCleaner.java
---------------------
2008/09/23
tidy up javadoc
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2008/09/23
do not add SR nodes to tree twice when parsing from DICOM attribute list; stops StructuredReportBrowser showing extra nodes between actual nodes (000440) - caused by fix to (000427)
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/StructuredReport.java
---------------------
2008/09/24
Start work on adding support of negotiation of user identity during association establishment (000441)
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2008/09/25
start work on allowing comprssed transfer syntaxes on the network (000321) by exposing control of transfer syntaxes (though not yet implementing alternatives to the existing acceptance policy), and stop accepting query and retrieve SOP Classes when there is no database and appropriate responders (000442), by refactoring out presentation context, abstract syntax and transfer syntax selection classes rather than hardwiring them in the association acceptor (000443), by adding a new StorageSOPClassSCPDispatcher constructor; remove unused (class scope) StorageSOPClassSCP constructors
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/Makefile
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
---------------------
2008/09/25
tidy up javadoc
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
---------------------
2008/09/25
begin experimenting with accepting JPEG lossy baseline compressed transfer syntaxes on the network (000321) using DicomCleaner (which can already handle imported compressed images) as a test application
com/pixelmed/display/DicomCleaner.java
---------------------
2008/09/25
allow network reception of JPEG lossy baseline compressed transfer syntax (000439) in DicomCleaner, and make file system import consistent (i.e., import baseline JPEG, deflate and bzip2 (if codec available) and not just all transfer syntaxes) (000438)
com/pixelmed/display/DicomCleaner.java
---------------------
2008/09/25
use real AET, if there is one, in meta header when exporting from DicomCleaner and DicomImageBlackout (000444)
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
---------------------
2008/09/25
make help text about discarding selected box clearer in DicomImageBlackout (000445)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2008/09/25
make sure that DicomImageBlackout erases previous image when one dimension of the size does not change but the other shrinks (000446)
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
---------------------
2008/09/26
add database method to search for records based on key name-value pair, not just UID (000447), and refactor UID method to use it; also add appropriate method name for getting local file name column name and deprecate old method name (000449); add tests to one of the concrete database model classes to exercise the name-value pair search method
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/Makefile
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2008/11/06
rename WaveformAnnotationSequence (was inconsistent between PS 3.3 and 3.6)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2008/11/14
remove private attributes inside sequences as well (000450)
com/pixelmed/dicom/AttributeList.java
---------------------
2008/11/14
Add mechanism to remove only unsafe private attributes, and use it in DicomCleaner (000451)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomCleaner.java
---------------------
2008/12/07
Add multi-frame support to ImageToDicom (000453); do not add NumberOfFrames if only one frame (000454); add current date/time as StudyDate/Time rather than empty values (000455)
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/SOPClass.java
---------------------
2008/12/07
add test cases for multiframe ImageToDicom, include JIIO jar in class path, and fix RescaleType to be LO rather than CS
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/Makefile
---------------------
2009/01/08
tidy up javadoc about annotation choices for consumer image format maker
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2009/01/08
use correct annotation command line argument for consumer image format maker test, and add a 16 bit test
com/pixelmed/display/Makefile
---------------------
2009/01/10
tidy up javadoc
com/pixelmed/dicom/PDFToDicomImage.java
---------------------
2009/01/10
only keep private creators for safe private tags, not all of them (000456)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2009/01/10
Populate Deidentification Method with more detail (000457); add option to retain patient characteristics during de-identification (000458)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/01
add segmentation sop class as an image (and surface segmentation sop class as a non-image) (000459)
com/pixelmed/dicom/SOPClass.java
---------------------
2009/02/03
add ability for DicomCleaner to detect whether or not lossless JPEG codec is available (from JIIO) and if so accept that transfer syntax on the network (this is more work on (000439) and the beginning of a solution to the more general problem for all network applications (000321))
com/pixelmed/display/DicomCleaner.java
webstart/DicomCleaner.jnlp
---------------------
2009/02/07
factor text messages in DicomCleaner, add checkboxes for each replacement attribute, add AccessionNumber replacement (000462)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/07
add batch file to start DicomCleaner on windows
DicomCleaner.bat
---------------------
2009/02/07
hardwire windows LAF in DicomCleaner (since it can't be set with web start :() (000467)
DicomCleaner.bat
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/08
Make message logger scroll to end regardless of thread from which append events are received (000468)
com/pixelmed/display/DialogMessageLogger.java
---------------------
2009/02/08
added progress bar to MediaImporter base class to support resolution of (000469); not yet required for public cub-classes
com/pixelmed/dicom/MediaImporter.java
---------------------
2009/02/08
added progress bar on status line for import, clean, export and send, which required refacroring of action listeners to use worker on separate thread to allow GUI to update - do not yet have good source of progress information for query, retrieve and blackout (000469)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/08
improve DicomCleaner logging, including re-using dialog that can be raised and lowered and cleared, and include cleaning, blackout, export and sending operations in log (000466)
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/network/Makefile
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2009/02/08
add more logging, including of receipt in storage SCP, and retrieval requests (000466)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/09
use GridBagLayout in DicomCleaner main panel to prevent status bar changing height on window resize (000470)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/15
add to Attribute class static convenience methods to fetch value from Attribute that may be null, add test class to exercise them, and disambiguate getStringValues() method calls since static and non-static versions are now ambiguous with null argument (000473)
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/Makefile
---------------------
2009/02/15
for numeric database values, check for possibility of empty string and insert NULL rather than (invalid empty) string value, otherwise numeric value only (and never string value itself) (000474)
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2009/02/15
Store rather than discard unrequested SOP Instances (000471), and do not keepin waiting forever for instances that may never come (use timeout value) (000472)
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2009/02/15
make StorageSOPClassSCPDispatcher interruptable, so it can be restarted on different port or with different AET (000475)
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2009/02/15
add ability to configure network properties from user interface (000461)
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
---------------------
2009/02/15
Add user interface and property saving for network properties (000461), and begin experimenting with ability to cancel prolonged activities (currently not turned on)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/16
DicomCleaner should default to replace AccessionNumber with zero length (000480)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/16
do not complain when same DNS SD information is received twice for localname and AE
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/PresentationAddress.java
---------------------
2009/02/18
improve usage description of webstart DicomCleaner
webstart/DicomCleanerUsage.html
---------------------
2009/02/18
recognize private Fuji CR image SOP Class as an image (000483)
com/pixelmed/dicom/SOPClass.java
---------------------
2009/02/21
In DicomCleaner, add support to import and receive JPEG2000 (000484), and only returned one accepted transfer syntax in selection policy
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/22
check for valid range and length of numeric addValue() methods for DS and IS methods, and add utility to support the necessary float formatting with maximum possible precision and add accompanying unit tests (000486)
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/Makefile
---------------------
2009/02/22
check result of pdftodicom is valid with dciodvfy
com/pixelmed/dicom/Makefile
---------------------
2009/02/22
set lossy image compression flag, method and ratio when decompressing from lossy transfer syntax during reading (000485)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/DicomCleaner.java
---------------------
2009/02/22
tidy up javadoc
com/pixelmed/dicom/AttributeList.java
---------------------
2009/03/06
quote file name argument to shell script to allow embedded spaces
validate.sh
---------------------
2009/03/20
Correct webstart JNLP spec version (000487)
webstart/DicomCleaner.jnlp
webstart/DicomImageBlackout.jnlp
webstart/DicomImageViewer.jnlp
webstart/ECGViewer.jnlp
webstart/MediaImporter.jnlp
---------------------
2009/03/23
add support for using UUIDs as UIDs (OIDs) (000488)
com/pixelmed/utils/Makefile
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2009/03/23
tidy up javadoc
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2009/03/23
update DICOM data dictionary to include surface segmentation
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/03/30
Begin work on validating SR templates (000489)
Makefile
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
add template inclusion, deprecated coding scheme check, and context group for languages to SR validation
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
fix VM check and add more templates to SR validator
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
support matching of anonymous (no concept) content items, display numeric path to current content item, factor out locationdescription from error templates when validating SR
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
need to support matching of anonymous (no concept) content items from rule compiler (not just common rules), in order to allow their children to be checked when valiating SR
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
add support for checking units of numeric content items when validating SR
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
add support for checking units of numeric content items when validating SR
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
add check of single value rather than requiring context group when valiating SR
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
add some more templates, including some complex conditions, for SR validation
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
add checks for graphics type and number of points, as well as more templates, for SR validation
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/03/31
update SR templates to correct illegal has obs context relationship with child container
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/02
revise organization of simple measurement template to use num parent scoord child pattern; clean up spurious characters from typos; temprarily support bad document title code in SR validation
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/03
update locations of SR validation test objects; remove unnecessary argument from command line invocation of SR validator (description source file name is hardwired for now)
com/pixelmed/validate/Makefile
---------------------
2009/04/03
start implementing template inclusion conditionality, vm and required type, and use basic diagnostic imaging report as a test case, for SR validation
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/04
match nested included templates, not just content items; implement conditional template inclusion; improve match and no match description when describing parsing; add observation context related conditions and context groups
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/04
describe iteration on matching
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
---------------------
2009/04/04
add more context groups
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/04
add two character language codes to CID 5000
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2009/04/04
support checking for root template based on both in band TID and report title; record content items used in first pass and add second pass to report unused ones as errors
com/pixelmed/validate/CheckSRContentItemsUsed.xsl
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/DicomSRValidator.java
---------------------
2009/04/04
add support for checking presence of content item using CID for Concept Name
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2009/04/04
label path to template content items with concept name of wildcard (not specified) or concept name CID, not just single concept
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2009/04/05
Add panel to display icons for images for future viewer navigation (000490)
com/pixelmed/display/IconListBrowser.java
---------------------
2009/04/05
Add panel to display icons for images for future viewer navigation (000490)
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/Makefile
---------------------
2009/04/05
split descriptions into separate lines
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
---------------------
2009/04/05
make annotations color (000491), allow for choice of icon annotations (000493), check for compression supported before setting parameters (000495)
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2009/04/05
rename convertToThreeChannelImageType() method to reflect that it only changes 4 band images (000492)
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2009/04/05
change to using JList of ImageIcons in IconListBrowser to implement selection mechanism (000494)
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/Makefile
---------------------
2009/04/06
add test of spacing with mag factor on mammo images
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
---------------------
2009/04/06
Update copyright date
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2009/04/06
Factor our pixel spacing selection logic into its own class, comply with CP 586 but allow for IHE Mammo profile case, have it create a description of what type of pixel spacing was chosen, take into account spacing from GeometryOfVolume to make distance measurements on enhanced objects work (000496), and include description of pixel spacing choice in image panel and viewers (000495)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
---------------------
2009/04/06
add javadoc for PixelSpacing; use PixelSpacing in ChestImageViewer
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/display/ChestImageViewer.java
---------------------
2009/04/08
Add data elements, sop classes and transfer syntaxes from sup 141 Enhanced MR Color, sup 137 MPEG2 MP@HL, sup 133 Color Palette, Sup 130 Ophthalmic Refractive Measurements Storage, Sup 123 structured display, Sup 122 ft2 revised pathology identification, Sup 117 ft2 enhanced PET
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2009/04/09
correct code for additional lesion observation datetime
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/12
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
---------------------
2009/04/12
add sup 43 Volume US data elements and UIDs
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/04/14
add CheckSRContentItemsUsed.xsl to jar file, else SR validation fails
Makefile
---------------------
2009/04/14
correct code and nesting level of condition on region raster inclusion
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/15
update with dictionary and IEs for Sup 117 Enhanced PET
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/04/16
remove text alternative to coded finding site
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/17
add psueod-progression time point observation
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/17
Additional Observation can only be yes, and remove redundant initial/additional codes from Lesion Type Modifier (CID RPH_7005)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/04/21
Add utility to rotate and flip DICOM images (000497)
com/pixelmed/apps/Makefile
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/utils/StringUtilities.java
---------------------
2009/04/21
Add utility to rotate and flip DICOM images (000497) - make it work for color images
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2009/04/21
update DicomCleaner webstart
Makefile
icons/DicomCleaner.icns
icons/DicomCleaner.png
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanel.png
webstart/images/DicomCleanerCopyShortcut.png
webstart/images/DicomCleanerLocalConfiguration.png
webstart/images/DicomCleanerMainPanelAfterClean.png
webstart/images/DicomCleanerPasteShortcut.png
webstart/images/DicomCleanerRemoteConfiguration.png
webstart/images/DicomImageBlackoutColorUltrasound.png
webstart/images/PixelMedLogoAndTitle.gif
---------------------
2009/04/21
update DicomCleaner webstart
webstart/DicomCleanerUsage.html
---------------------
2009/04/25
display name of root template; add flag for mandatory (IOD based) root template; add KOS template and context groups
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2009/04/25
Allow DicomCleaner to import J2K files on Mac with WebStart by calling ImageIO.scanForPlugins() before checking supported transfer syntaxes (000498)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/04/25
Allow ConvertAmicasJPEG2000FilesetToDicom to work via WebStart on Mac by calling ImageIO.scanForPlugins()
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2009/04/25
populate additional MR required type 1 and 2 attributes with dummy or empty values (000501)
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2009/04/29
Add support to blackout for display, burning in to pixel data and blackout of overlays (00502)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2009/04/29
make de-identifier descend into sequences other than ContentSequence (000503), remove all attributes in Sup 142 current draft (000504), and use new in Contributing Equipment Sequence from CP 892 (000505)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2009/05/02
Add Windows installable version of DicomCleaner, with and without its own JRE (000507)
DicomCleaner.bat(DEAD)
DicomCleanerAssumingJREInstalled.bat
DicomCleanerWithOwnJRE.bat
DicomImageViewerWithCDJRE.bat(DEAD)
DicomImageViewerWithOwnJRE.bat
Makefile
LICENSES/hypersonic_lic.txt(DEAD)
LICENSES/jwsdp.LICENSE.txt(DEAD)
LICENSES/jwsdp.THIRDPARTYLICENSEREADME.txt(DEAD)
fonts/ARIALUNI.TTF
fonts/Cyberbit.ttf
windows/Makefile
windows/jre-6u13-windows-i586_plus_jai_imageio-1_1_asinstalled.zip
---------------------
2009/05/02
Add MacOS installable version of DicomCleaner, with Linux JIIO codec (000507)
Makefile
DicomCleaner.app/Contents/Info.plist
linux/lib/jai_imageio.jar
---------------------
2009/05/02
Update DicomCleanerUsage page to point to installable versions of DicomCleaner (000507)
webstart/DicomCleanerUsage.html
---------------------
2009/05/02
Include installable versions of DicomCleaner in release target (000507)
Makefile
---------------------
2009/05/02
remove duplicate icon target
Makefile
---------------------
2009/05/02
Replace SpecificCharacterSet after de-identification to be minimum necessary for strings remaining (000506)
com/pixelmed/display/DicomCleaner.java
---------------------
2009/05/02
add URLs for section headings
webstart/DicomCleanerUsage.html
---------------------
2009/05/06
remove trailing spaces from some context group code meanings
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2009/05/06
use SOPClassUID in header not CONTAINER attribute for template selection (000509)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2009/05/06
lookup codes directly in context group XML file rather than using key(), since does not work in Java 6 (000510)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/05/06
add missing context group
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2009/05/06
correct code meanings of various concepts in templates
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/05/06
add support for using quotes in code meanings in template descriptions, escape them so as to not break XSL-T, and check code meanings match for concept names, whether defined in the template or indirected through a context group
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2009/05/06
lesion type modifier is optional in template
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/05/06
consider template inclusion type only when nesting level is top level when checking for mandatory content item (000511)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2009/05/06
add modality modifier to UE and similar lesion content items and increase VM
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/06/07
add support for Quaqua LAF, and fix background bug for multipanel (000520)
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
lib/additional/libquaqua.jnilib
lib/additional/libquaqua64.jnilib
lib/additional/quaqua.jar
---------------------
2009/06/11
correct multi-frame color-by-plane blackout problem, by using full frame stride to calculate pixel offset (000514)
com/pixelmed/display/ImageEditUtilities.java
---------------------
2009/07/07
add overlay description to cleaner usage page
webstart/DicomCleanerUsage.html
webstart/images/DicomImageBlackoutColorUltrasound.png
webstart/images/DicomImageBlackoutOverlayDose.png
---------------------
2009/07/09
add support for overlay data with OB VR
com/pixelmed/dicom/Overlay.java
---------------------
2009/07/17
close input files in StorageSOPClassSCU to avoid running out of file handles (and add tests to support checking this) (000519)
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2009/07/18
Add CP 875 mammo view modifiers (000520)
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2009/07/18
Add CP 875 mammo view modifiers (000520)
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2009/07/18
Remove SpecificCharacterSet if ASCII, rather than inserting (illegal) zero length, since Type 1C (000521)
com/pixelmed/dicom/AttributeList.java
---------------------
2009/07/22
update templates and context groups
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/07/23
update templates and context groups
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/07/27
close FileInputStream in addition to DicomInputStream in read() from file, to prevent blocking of subsequent file delete or rename on Windows (000522)
com/pixelmed/dicom/AttributeList.java
---------------------
2009/08/09
add laterality for procedure and make exam ID a 1-n UIDREF
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/08/09
tidy up input stream test
com/pixelmed/dicom/Makefile
---------------------
2009/08/09
updated data dictionary, including OverlayData OW->OX, and rename BreastImplantPresent
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
---------------------
2009/08/09
Add Breast Tomosynthesis Image Storage SOP Class UID
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2009/08/12
Fix AttributeList.read() performance affected by inefficient AttributeTag.compareTo() (000523)
com/pixelmed/dicom/AttributeTag.java
---------------------
2009/08/12
increase memory for webstart of DicomCleaner
webstart/DicomCleaner.jnlp
---------------------
2009/08/12
when cleaning webstart, do not remove icons folder
Makefile
---------------------
2009/08/12
tidy up text in DicomCleaner usage page
webstart/DicomCleanerUsage.html
---------------------
2009/08/14
Detect and correct occasional odd length PDU in query response caused by use of deflate transfer syntax (000524)
com/pixelmed/network/Association.java
com/pixelmed/network/IdentifierMessage.java
---------------------
2009/08/16
add C-GET test
com/pixelmed/network/Makefile
---------------------
2009/09/15
capitalize Edit Reason in SR
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/09/16
add adjudication templates and related context groups
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/09/17
update some SR context groups
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2009/09/17
Fix incorrect replacement of IMAGE SOP Class and Instance UIDs by Presentation State UID values when constructing ImageContentItems (000527)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2009/09/19
add missing template row in SR
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/09/19
Add support for load and display of single bit images (000528)
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2009/09/23
add more performing roles, add calibration lesion type and conditions to clinical trial SR
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/10/01
text annotation changed from 3 to 2 points
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/10/01
correct SR ellipse or polyline graphic type check
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
---------------------
2009/10/01
add more performing roles to context group for clinical trials SR
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2009/10/22
correct IntegerString addValue() range checks (should be Integer not Short) (000531)
com/pixelmed/dicom/IntegerStringAttribute.java
---------------------
2009/10/23
extent clinical trial SR context groups with local mean and max and pre-coordinated roles
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2009/10/29
add new data elements and SOP class from Oct 2009 WG6
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/11/04
correct VM of images in image library
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/11/04
add flag to supress reading pixel data to DicomFile in SetOfDicomFiles
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2009/11/04
correct copyright date in file
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2009/11/06
improve DICOMDIR error handling (000534)
com/pixelmed/dicom/DicomDirectory.java
---------------------
2009/11/06
add SUVbw calculation to pixel value inspector for PET (000535)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2009/11/06
supress dump of SR after XML parsing
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2009/11/06
include SUV case where pixels already in GML
com/pixelmed/dicom/SUVTransform.java
---------------------
2009/11/06
correct PET default windowing from (non-rescaled) header values (000536)
com/pixelmed/dicom/VOITransform.java
---------------------
2009/11/14
Fix swapped row and column pixel spacing in localizer posting calculation (000537)
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2009/11/14
Fix swapped row and column pixel spacing in localizer posting calculation (000537)
com/pixelmed/geometry/LocalizerPoster.java
---------------------
2009/11/14
tidy up mac app generation and correct typos in Makefile
Makefile
---------------------
2009/11/18
correct context group for unable to measure to handle target and new lesions; fix hypen and apostrophe punctuation in code measnings; use DICOM CP 973 orbit codes
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/11/18
DICOM CP 951 dual energy weighting attributes
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2009/11/18
update DICOM data dictionary per Oct 2009 CPs
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/11/18
add support for old API to removeOrNullIdentifyingAttributes() to recompile old DIS
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2009/11/22
update year on main copyright notice
COPYRIGHT
---------------------
2009/11/22
add Open Source Initiative logo to DicomCleanerUsage
Makefile
webstart/DicomCleanerUsage.html
webstart/images/osi_standard_logo.png
---------------------
2009/12/04
Add utility to move files into folder hierarchy like dicom3tools dcmvhier.datedesc (000539); support it with additional convenience AttributeList.read() methods, a message digest file method to help compare two files for identical content, and byte array dump as a hex string to support that
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/HexDump.java
---------------------
2009/12/05
ensure BitsAllocated is multiple of 8 (000541)
com/pixelmed/dicom/ImageToDicom.java
---------------------
2009/12/05
make PositionReferenceIndicator type 2 (000542), do not attempt to convert non-JP2 (non .demo) files and do not quite on first exception (000543) in Amicas to Dicom conversion
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2009/12/05
add more Amicas to DICOM test cases
com/pixelmed/convert/Makefile
---------------------
2009/12/05
rather than ignore, move same name different content into duplicates hierarchy
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2009/12/05
use predefined folder name for hierarchy, which is peer of duplicate folders
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2009/12/05
use predefined folder name for hierarchy, which is peer of duplicate folders
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2009/12/06
prevent clean looping forever if subdirectory missing
Makefile
---------------------
2009/12/09
add comment about buggy NVIDIA drivers
README
---------------------
2009/12/09
add a utility to watch a disk folder and send to a remote storage SCP; also add method to SetOfDicomFiles.add() that has a File parameter, else gets added to superclass HashSet as an Object and causes class cast exception when used
com/pixelmed/apps/Makefile
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2009/12/09
upgrade jmdns library to 3.0 (modified with longer timeout and IPV6 suppression), which requires manually unregistering services in shutdown hook
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
lib/additional/jmdns.jar
---------------------
2009/12/10
add configuration and logging GUI and properties file for remote network target (only) to WatchFolderAndSend
com/pixelmed/apps/Makefile
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
---------------------
2009/12/10
In WatchFolderAndSend add per file success/failure testing, remove files only on success, attempt only DICOM files and check file not being modified
com/pixelmed/apps/Makefile
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2009/12/10
add JWS for WatchFolderAndSend
Makefile
icons/WatchFolderAndSend.png
webstart/WatchFolderAndSend.html
webstart/WatchFolderAndSend.jnlp
---------------------
2009/12/10
do not crash if sent DICOMDIR, and do not send DICOMDIR in the first place (000544)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2009/12/10
do not crash if sent DICOMDIR, and do not send DICOMDIR in the first place (000544)
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2009/12/16
add constructor from String to AttributeTag, use it in AttributeTagAttribute to allow round trip XMLRepresentationOfDicomObjectFactory with AT attributes to work, add a test main method to AttributeTag, and a makefile XML test case testxmlbackimgwithat (000545)
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/Makefile
---------------------
2009/12/16
fix UnsignedLong to parse string that is large positive integer greater than Integer.MAXVALUE (000546); add get methods for all scalar types to IS, US, SS, SL and UL where missing and add necessary support to ArrayUtils; add minimum and maximum test cases for this and similar VRs for all scaler return types to AttributeTest
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2009/12/16
tidy up javadoc
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/dicom/AttributeTagAttribute.java
---------------------
2009/12/16
add missing icon
Makefile
icons/MediaImporter.png
---------------------
2009/12/16
exclude some residual database files from release; also not that previous 1.110 checkin turned on Mac flags to disable resource fork inclusion in tar file
Makefile
---------------------
2009/12/18
add additional chest amd mammo CAD relationship content constraints per CP 767
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2009/12/18
Add SOPInstanceUIDOfConcatenationSource per CP 809
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2009/12/18
Add more responsible person role defined terms per CP 826
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2009/12/18
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/12/22
add support for circle, ellipse and multipoint drawing from SR (000548)
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/MammoImageViewer.java
---------------------
2009/12/28
dictionary updates from recent CPs and Supplements, and correct UID per Sup 133 FT2
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/TagFromName.java
---------------------
2009/12/28
add support for color palette storage per Sup 133
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/sRGBColorSpaceProfileInputDevice.icc
com/pixelmed/utils/ByteArray.java
---------------------
2009/12/28
add alternate language content descriptions for color palettes and example of pet 20 step
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/Makefile
---------------------
2009/12/28
remove RequestedProcedureID (000550)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2009/12/28
add ability to retain SeriesDescription even if all other descriptions removed (000551)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/display/DicomCleaner.java
---------------------
2009/12/29
factor out color palette main() method, correct names, add remaining standard palettes
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/Makefile
---------------------
2010/01/10
add colon CAD and macular grid thickness SOP Classes per DICOM 2009
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2010/01/11
add count of instances received when finished synchronizing (000555)
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2010/01/14
add support for C-GET to SynchronizeFromRemoteSCP (000556), supply full path not just base file name in C-GET receivedObjectHandler, and add option to remote sync to handle SCPs that do not return anything with completely non-specific query (000557)
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2010/01/27
add elements to dictionary from Jan 2010 WG 6 FT CPs and Sups
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2010/01/31
added back CDJRE batch file, updated for jre6, since needed by nemamfct and nemamfmr builds
DicomImageViewerWithCDJRE.bat
---------------------
2010/01/31
update keywords, descriptions and VRs to match CP850 modified 2009 edition of standard
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/01/31
make FrameVOILUTSequence Type 1 rather than Type 2 as per Sup 83
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/01/31
remove original image requirement from condition on energy weighting in enhanced CT (is not required by standard as per CP 951)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/01/31
update copyright to 2010
COPYRIGHT
---------------------
2010/01/31
update JRE6 to _18
windows/Makefile
windows/jre-6u13-windows-i586_plus_jai_imageio-1_1_asinstalled.zip(DEAD)
windows/jre-6u18-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip
---------------------
2010/02/04
extend quote handling mechanism in concept names to parents in buildFullPathInDefinitionToCurrentContentItem, otherwise show up as empty
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2010/02/04
add validation of CT X-Ray Dose
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/02/04
add validation of CT X-Ray Dose
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/02/06
add Patient Size Code Sequence to Patient Study Module per CP 650
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/02/06
Add separate, multiple, velocity encoding directions for reconstruction versus acquisition in Enhanced MR per CP 998
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/02/06
Changes to diffusion defined terms and sequence conditions per CP 984
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/02/06
Add Arterial Spin Labeling attributes for Enhanced MR Images per CP 981 FT2
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2010/02/07
tidy up javadoc
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2010/02/17
User correct CommandDataSetType keyword in network stuff, which was broken by recent change (000560)
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
---------------------
2010/02/19
change macapp make process to always use include latest JavaApplicationStub (http://neosmart.net/blog/2009/make-old-java-applications-fully-snow-leopard-compatible/); also add specific macapps target and use when doing macapprelease
Makefile
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2010/02/19
do not pop up dialog box for file to display in viewer if no file on command line
com/pixelmed/display/DicomImageViewer.java
---------------------
2010/02/20
refactor inner classes for action listeners et al to use instance variables rather than parameters
com/pixelmed/display/DicomImageViewer.java
---------------------
2010/02/20
add support for registering apple file open event and responding to it (in a way that compiles across all platforms)
Makefile
NOTES
DicomImageViewer.app/Contents/Info.plist
apple/dts/samplecode/osxadapter/OSXAdapter.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2010/02/21
clean up mac plist to allow for filenames without extensions
DicomImageViewer.app/Contents/Info.plist
---------------------
2010/02/21
set parent directory for mac file open events to allow DICOMDIR image references to load
com/pixelmed/display/DicomImageViewer.java
---------------------
2010/02/27
handle spaces in filename for viewer shell script
DicomImageViewer.sh
---------------------
2010/02/27
use current dir in viewer shell script (as before)
DicomImageViewer.sh
---------------------
2010/02/28
tidy up javadoc
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2010/03/08
recognize non-standard ISO_IR 6 equivalent of default character set, since harmless
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2010/03/14
tidy up javadoc
com/pixelmed/dicom/AttributeTreeBrowser.java
---------------------
2010/03/14
add SR display capability to DicomImageViewer (000561)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
---------------------
2010/03/14
add ability to select SR template based on procedure reported qualifier for document title (for dose reports), and modify conditions on root template invocation not to duplicate check if both template identification sequence and document title present
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/03/14
Add projection x-ray dose SR templates (000563)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/03/18
model multiple accumulated dose content items as VM 1-2 on top level container rather than multiple template inclusion (else gives error when checking multiplicity within template
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/03/20
add more private SOP Classes
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2010/03/21
comment out debugging comments related to numeric content item qualifiers
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2010/03/21
add equals() and hashCode() methods for CodedSequenceItem and AttributeList based on Attribute.toString().equals() (000565)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CodedSequenceItem.java
---------------------
2010/03/26
add recognition of dose SR templates for enhanced and comprehensive SOP classes
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/03/26
capitalize X-Ray consistently in radiation dose reports (per CP)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/03/27
define InstanceCreatorUID for toolkit (000567)
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/VersionAndConstants.java
---------------------
2010/03/28
experiment with more compact representation of content in SR tree browser
com/pixelmed/dicom/ContentItem.java
---------------------
2010/03/31
non-zero value checks in dose SR
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/04/08
add CT anatomy extraction
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2010/04/09
call dispose() for JIIO readers and writers to prevent resource leak (000568)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
---------------------
2010/04/09
call dispose() for JIIO readers and writers to prevent resource leak (000568)
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/display/DicomCleaner.java
---------------------
2010/04/09
prevent null pointer exception from SourceImage.getBufferedImage(int) (000569)
com/pixelmed/display/SourceImage.java
---------------------
2010/04/20
handle invalid color palettes (empty or near-empty with zero descriptors) in grayscale images when windowing (000570)
com/pixelmed/display/SourceImage.java
---------------------
2010/04/20
handle content identification macro attributes when de-identifying (000572)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2010/04/22
add contrib directory with Marcel's MWL
contrib/Contrib_ModalityWorklist.zip
contrib/README
---------------------
2010/04/30
add force zero blackout value to handle extreme -ve pixel value when signed causing windowing problems (000573)
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SourceImage.java
---------------------
2010/04/30
add use pixel padding value option to handle extreme -ve pixel value when signed causing windowing problems (000573)
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2010/04/30
document use pixel padding value and force zero blackout value in DicomCleaner (000573)
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerShowVersion.png
webstart/images/DicomImageBlackoutColorUltrasound.png
webstart/images/DicomImageBlackoutOverlayDose.png
---------------------
2010/04/30
show SCP IP address in NetworkApplicationConfigurationDialog (000574)
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
webstart/images/DicomCleanerLocalConfiguration.png
---------------------
2010/05/03
add apple directory to source release and makefiles
Makefile
apple/dts/samplecode/osxadapter/Makefile
---------------------
2010/05/23
add dose, doseocr and test packages, include them with anatproc in distribution, update copyright dates in various packages, comment out anatproc debugging messages
Makefile
Makefile.common.mk
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/apps/package.html
com/pixelmed/database/package.html
com/pixelmed/dicom/package.html
com/pixelmed/display/package.html
com/pixelmed/display/event/package.html
com/pixelmed/displaywave/package.html
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/CompositeInstanceContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/Makefile
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/package.html
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_GEDoseScreen.xml
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
com/pixelmed/doseocr/ocr.sh
com/pixelmed/doseocr/package.html
com/pixelmed/network/package.html
com/pixelmed/query/package.html
com/pixelmed/scpecg/package.html
com/pixelmed/server/package.html
com/pixelmed/test/Makefile
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/package.html
com/pixelmed/utils/package.html
com/pixelmed/validate/package.html
com/pixelmed/web/package.html
---------------------
2010/05/23
include test class in makefile
com/pixelmed/doseocr/Makefile
---------------------
2010/05/23
include junit jar in dependency binary, and include it in javadoc
Makefile
Makefile.common.mk
README
LICENSES/junit_cpl-v10.html
---------------------
2010/05/23
make most OCR internal methods private rather than protected for now; tidy up argument handling, use default glyph file name, and add test cases preparatory to reordering them
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2010/05/23
reorganize arguments to main method
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2010/05/23
find dose screen image while searching acquired images
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2010/05/25
add some formatting options doe dumping CTDose
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/05/28
updated to include person observer at MO level
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/05/28
tidy up javadoc
com/pixelmed/anatproc/package.html
com/pixelmed/convert/package.html
---------------------
2010/05/28
dose utility and accompanying refactoring of OCR and changes to dose classes
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/Makefile
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/05/31
handle OCR of images with bad window values, and factor debug level out to command line
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2010/05/31
handle OCR of images with bad window values, and factor debug level out to command line
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
---------------------
2010/05/31
handle OCR of images with bad window values, and factor debug level out to command line
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/05/31
add debug level to messages
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
---------------------
2010/05/31
make dose toString more pretty for use in reports, add check boxes to utility to control reporting and logging, retrieve only CT modality series
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/Makefile
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2010/05/31
factor out title from attribute list builder from SourceImage and make available in AttributeList, provide title for SR in DicomBrowser
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/SourceImage.java
---------------------
2010/05/31
add image and SR viewer capability to dose utility
com/pixelmed/apps/DoseUtility.java
---------------------
2010/05/31
add button to validate SR report content
com/pixelmed/apps/DoseUtility.java
---------------------
2010/05/31
more adjustments to window center and width logic for OCR
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2010/05/31
add DoseUtility to webstart
Makefile
webstart/DoseUtility.html
webstart/DoseUtility.jnlp
webstart/DoseUtilityUsage.html
webstart/images/DoseUtilityCopyShortcut.png
webstart/images/DoseUtilityDoseSRTree.png
webstart/images/DoseUtilityDoseSRValidation.png
webstart/images/DoseUtilityDoseScreenImage.png
webstart/images/DoseUtilityLocalConfiguration.png
webstart/images/DoseUtilityLogOfReport.png
webstart/images/DoseUtilityMainPanel.png
webstart/images/DoseUtilityPasteShortcut.png
webstart/images/DoseUtilityRemoteConfiguration.png
---------------------
2010/05/31
constrain where doxygen searches
Doxyfile
---------------------
2010/06/04
add Philips dose screen with ExposureDoseSequence
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2010/06/04
clean up number precision in report
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2010/06/04
add debugging to anatomy selection
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2010/06/05
add anatomical terms
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2010/06/05
update webstart doc to describe Philips
webstart/DoseUtilityUsage.html
---------------------
2010/06/05
add support for unknown acquisition type
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/Makefile
com/pixelmed/test/TestCTScanType.java
---------------------
2010/06/05
include UCUM version number in dose SR numeric entries
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2010/06/05
avoid divide by zero in calculating scanning length
com/pixelmed/dose/CTAcquisitionParameters.java
---------------------
2010/06/05
use text values when header values for CTDIvol and DLP missing, and use DOSE_INFO and LOCALIZER image types regardless of other image type values; add test example of total DLP only
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/Makefile
---------------------
2010/06/16
train on yet another different font in GE dose screens
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR_Glyphs_GEDoseScreen.xml
---------------------
2010/06/16
start work on properly handling escape characters in SQL statements for DB insertion and conversion of DICOM query wildcards - still have single quote to do (000575)
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/network/FindSOPClassSCU.java
---------------------
2010/06/16
refactor dose series and instance detection logic, when querying for dose records, descend to instance level when necessary, accomodate old (pre-000575) database hyphen replacing underscore in ImageType
com/pixelmed/apps/DoseUtility.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
---------------------
2010/06/16
adjust threshold (after 8 bit conversion) to handle potential lossy compressed images
com/pixelmed/doseocr/OCR.java
---------------------
2010/06/16
train on yet another different font in GE dose screens
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/06/17
comment out logging message
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2010/06/17
Add ability to export files from DicomCleaner as zip file (000576)
com/pixelmed/display/DicomCleaner.java
---------------------
2010/06/17
Update documentation for ability to export files from DicomCleaner as zip file (000576)
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanel.png
webstart/images/DicomCleanerMainPanelAfterClean.png
---------------------
2010/07/03
train OCR on missed Axial value
com/pixelmed/doseocr/OCR_Glyphs_GEDoseScreen.xml
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/07/13
add windows batch file for dose utility
DoseUtilityAssumingJREInstalled.bat
---------------------
2010/07/14
Add support for multi-select retrieval in query tree browser, and try it in DoseUtility (000577)
com/pixelmed/apps/DoseUtility.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/query/QueryTreeBrowser.java
---------------------
2010/07/14
Add windows executables for DoseUtility
DoseUtilityWithOwnJRE.bat
Makefile
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/Info.plist
DoseUtility.app/Contents/PkgInfo
DoseUtility.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/MacOS/JavaApplicationStub
icons/DoseUtility.icns
icons/DoseUtility.png
icons/MediaImporter.icns
---------------------
2010/07/15
make identification of x-ray source consistent in radiation dose report (Draft CP 1063)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/07/21
use two single quotes in place of one to escape them in SQL statements (000575)
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2010/07/21
start work on Siemens dose screen, by handling text in overlays, and training OCR on glyphs
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_GEDoseScreen.xml
---------------------
2010/08/01
update data dictionary from dicom3tools, including DICOS and Sup 120 extended presentation states
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2010/08/15
Make AttributeList (and hence CodedSequenceItem) equals() insensitive to leading and trailing spaces (000578)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CodedSequenceItem.java
---------------------
2010/08/15
add convenience method to validate from filename
com/pixelmed/validate/DicomSRValidator.java
---------------------
2010/08/15
update context group to include missing code for segmentation method
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2010/08/15
add a method to determine if a 3D point is in the plane of a slice
com/pixelmed/geometry/GeometryOfSlice.java
---------------------
2010/08/15
extend context to include Frame of Reference
com/pixelmed/dose/CompositeInstanceContext.java
---------------------
2010/08/15
use corrected code meaning of the indentification of the x-ray source
com/pixelmed/dose/CTAcquisitionParameters.java
---------------------
2010/08/15
make tree walker static
com/pixelmed/dicom/StructuredReport.java
---------------------
2010/08/15
add another convenience method to find named children from an entire code sequence item
com/pixelmed/dicom/ContentItem.java
---------------------
2010/08/15
make public some coded concept dictionary methods
com/pixelmed/anatproc/DictionaryOfConcepts.java
---------------------
2010/08/15
increase precision of FL when written to string or to XML file, and make sure mapping resource and template ID are capitalized when serializing to CS VR
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2010/08/24
add SOP Class and data elements for Sup 145 whole slide imaging
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2010/08/29
Add class to extract hierarchical reference from SR or KOS (000579)
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StructuredReport.java
---------------------
2010/09/07
More work on Siemens dose screen OCR, based on methods and patterns from giwarden
Makefile
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
com/pixelmed/doseocr/OCR_Glyphs_GEDoseScreen.xml(DEAD)
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
---------------------
2010/09/07
Add patient ID and name to dose report
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/09/08
Selection Siemens dose series for retrieval
com/pixelmed/apps/DoseUtility.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/query/QueryTreeBrowser.java
---------------------
2010/09/08
add data elements and SOP classes from Sup 144 and 146 FT
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2010/09/12
always include a name value for PNAME even if unknown
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/test/TestPersonParticipant.java
---------------------
2010/09/12
factor out common SR context creation for GE and Siemens dose screens
com/pixelmed/doseocr/OCR.java
---------------------
2010/09/12
do not write acquisition type content item, rather than illegal empty code, when unknown (e.g., cannot deteremine from Siemens dose screen)
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2010/09/12
add Siemens dose screen SR creation test case
com/pixelmed/doseocr/Makefile
---------------------
2010/09/12
make SR ContentItem constructor consistent in whether relation is null or empty for de novo values or from an existing AttributeList (000581)
com/pixelmed/dicom/ContentItem.java
---------------------
2010/09/12
make SR ContentItem constructor persist template mapping resource (000582)
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2010/09/12
Begin work on building CTDose from SR, by adding constructors and factory methods and checking round trip fidelity
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/Makefile
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/09/12
start adding convenience methods to get string values when top-down parsing SR content trees
com/pixelmed/dicom/ContentItem.java
---------------------
2010/09/12
detect dose screens and dose SR separately from amongst file collections, and extend DoseUtility to look at SR as well as screens
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
---------------------
2010/09/12
parse out start and end dates and total DLP for accummulated dose from SR
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/09/12
propagate description of CTDose via StudyDescription if not already present in CompositeInstanceContext, since no place for it in content tree
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/09/12
more extraction for reporting of SR dose report content, including acquisition and parameter information
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
---------------------
2010/09/13
update dose utility usage page to correct typos and mention Siemens screen
webstart/DoseUtilityUsage.html
---------------------
2010/09/13
add public constructor in DicomImageBlackout's CineSliderChangeListener (000583)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2010/09/21
Add double arguments for row and column to lookupImageCoordinate to improve accuracy of round trip from 3D to 2d and back (000584)
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2010/09/26
shorten string for DeidentificationMethod when blacking out and burning in overlays to prevent creating invalid LO greater than 64 characters (000585)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2010/10/14
extend kn own safe private elements to include GE and Philips CT dose related
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
---------------------
2010/10/30
update data dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2010/10/30
extend tabulated dose data OCR regression tests to include Siemens screens, which required extending acauisition dose equality to allow for null components and consistent handing of additional trailing zeroes for dose precision in decimal strings
NOTES
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/10/30
more work on Siemens dose screens, including handling decimal fractions when present, footnote on CTDIvol to indicate phantom, and presence of forward slash not just before reference exposure but also in series description; also indented debug levels to separate debugging of OCR process from pattern extraction
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/10/30
more Siemens dose screen regression tests
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/10/31
support Siemens alternative phantom indication in dose screen, and also support dose specification for localizers, adding scan type to regression tests
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/MacOS/JavaApplicationStub
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2010/10/31
do not include missing numeric content items, rather than including as empty, in generated RDSR
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2010/10/31
apply CP 1075 to allow dose information for constant angle acquisitions
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2010/10/31
add test of RDSR creation from Siemens sample for RSNA 2010 demo
com/pixelmed/doseocr/Makefile
---------------------
2010/10/31
use image ExposureTime as total for localizers, and per rotation if not
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2010/10/31
do not recurse below series level if already decided to retrieve entire dose screen or SR series (000587)
com/pixelmed/apps/DoseUtility.java
---------------------
2010/10/31
add accession number to text report from OCR and RDSR
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/10/31
track whether number is series or acquisition and display accordingly; clean up display of null in pretty report options
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2010/10/31
factor out from DoseUtility thee generation of the rendered human-readable report from OCR or SRs into a seperate class that can be invoked from command line
com/pixelmed/apps/DoseUtility.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2010/11/04
add option to remove clinical trial attributes during cleaning
com/pixelmed/display/DicomCleaner.java
---------------------
2010/11/04
add more safe private attributes
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2010/11/05
add scope UID to CTDoseAcquisition to disambiguate series and acquisition number within that scope when processing multiple studies, and also separate earliest and latest acquisition times by study while collecting irradiation event data from images
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2010/11/06
write UN attributes (000253)
com/pixelmed/dicom/UnknownAttribute.java
---------------------
2010/11/06
always use LO for private creator VR, whether implicit or explicitly wrong, which allows knowsn safe private feature to work on implicit VR input files
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
---------------------
2010/11/06
more unit tests of recently added safe private attributes
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
---------------------
2010/11/06
make SR files from dose screens and store them for comparison
com/pixelmed/doseocr/Makefile
---------------------
2010/11/07
process dose reports one study at a time in order of their sorting in the database tree, and only process dose series unless explicitly requested
ECGViewer.app/Contents/MacOS/JavaApplicationStub
com/pixelmed/apps/DoseUtility.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
---------------------
2010/11/07
update javadoc API source from Sun to Oracle
Makefile
---------------------
2010/11/07
include source in doxygen
Doxyfile
---------------------
2010/11/07
process dose reports one study at a time in order of their sorting in the database tree, and only process dose series unless explicitly requested
webstart/DoseUtilityUsage.html
---------------------
2010/11/07
add reporting of sex, age, weight and height to dose report
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCTDose.java
webstart/DoseUtilityUsage.html
---------------------
2010/11/07
add RDSR generation to DoseUtility, with additional changes to supporting classes, including keeping track of source instance in CTDose and additional class to generate SR
com/pixelmed/apps/DoseUtility.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/dose/CTDose.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2010/11/08
stop processing files when dose file encountered and CTDose object made, and document that there can be only one returned, and in the case of Philips dose screens or localizers, make sure that it is the one with the ExposureDoseSequence and ignore the localizers that don't contain it
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
---------------------
2010/11/08
make copy of JAI jar files from java website in case it goes away and we have to source them ourselves
webstart/NOTES
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/linux-i586/clibwrapper_jiio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/linux-i586/jai_imageio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/linux-i586/libclib_jiio.so.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-i586/clibwrapper_jiio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-i586/jai_imageio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-i586/libclib_jiio.so.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-sparc/clibwrapper_jiio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-sparc/jai_imageio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-sparc/libclib_jiio.so.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-sparc/libclib_jiio_vis.so.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-sparc/libclib_jiio_vis2.so.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/windows-i586/clib_jiio.dll.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/windows-i586/clib_jiio_sse2.dll.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/windows-i586/clib_jiio_util.dll.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/windows-i586/clibwrapper_jiio.jar
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/windows-i586/jai_imageio.jar
---------------------
2010/11/08
allow for the possibility that no dose information will be found and hence no RDSR generated, allowing processing of an entire tree to continue
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/09
recognize Siemens patterns that include D suffix on scan #, which apparently signals dual source
com/pixelmed/doseocr/OCR.java
---------------------
2010/11/09
handle Siemens images that contain IrradiationEventUID that spans more than one AcquisitionNumber, and recognize the earliest number as matching the dose in the dose screen
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2010/11/09
turn off debugging messages
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2010/11/11
add convenience methods to test if a code content items concept name and value match a specified cove value and coding scheme designator
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestContentItem_AllTests.java
---------------------
2010/11/11
update DICOM data dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2010/11/11
do not detect PET scans as foot body part, and treat mid body as whole body
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2010/11/12
handle x-ray tube current varying during event by computing mean and recording maximum
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2010/11/12
use supplied scanning length for localizers but override for axials with DLP/CTDIvol derived length for Philips DoseExposureSequence
com/pixelmed/dose/CTDose.java
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2010/11/13
add support for sending RDSR via secure ftp over tls to dose registry; includes adding apache commons net ftp to dependencies and new com.pixelmed.ftp package
DoseUtilityAssumingJREInstalled.bat
DoseUtilityWithOwnJRE.bat
Makefile
Makefile.common.mk
README
LICENSES/LICENSE-commons-net.txt
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/Makefile
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/Makefile
com/pixelmed/ftp/package.html
lib/additional/commons-net-ftp-2.0.jar
---------------------
2010/11/15
add ftp configuration support and use it in dose utility
com/pixelmed/apps/DoseUtility.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/ftp/Makefile
com/pixelmed/network/NetworkApplicationInformation.java
---------------------
2010/11/15
user FTPException in place of plain Exception
com/pixelmed/ftp/FTPFileSender.java
---------------------
2010/11/16
add alternate for missing DeviceSerialNumber based on StationName and InstitutionName
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestDeviceParticipant.java
---------------------
2010/11/16
make testsync headless
com/pixelmed/apps/Makefile
---------------------
2010/11/16
add more reader roles
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2010/11/17
factor out createContextForNewRadiationDoseStructuredReportFromExistingInstance() from OCR and ExposureDoseSequence into GenerateRadiationDoseStructuredReport, and have CompositeInstanceContext constructor copy generic RequestAttributesSequence into SR-specific ReferencedRequestSequence and generic ProcedureCodeSequence into SR-specific PerformedProcedureCodeSequence
com/pixelmed/dose/CompositeInstanceContext.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/OCR.java
---------------------
2010/11/17
add mid-scan time for GE CT as known safe private element
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2010/11/17
use private GE mid-scan time to estimate total exposure time; keep track of patient characteristics in entire image set in case missing in source instance for RDSR, allowing a little floating point tolerance for weight and size (e.g., to deal with trailing decimal point or zero
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/OCR.java
---------------------
2010/11/17
factor out use of patient characteristics from entire image set, so they are available to rendered reports as well as RDSR creator
com/pixelmed/dose/CompositeInstanceContext.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2010/11/17
include commons-net-ftp in webstart for DoseUtility
webstart/DoseUtility.jnlp
---------------------
2010/11/17
remove comment with hardwired registry path
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/17
units for patient size in report are m not cm
com/pixelmed/dose/CTDose.java
---------------------
2010/11/17
add space before filename in log message
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/11/17
units for patient size in report are m not cm
com/pixelmed/test/TestCTDose.java
---------------------
2010/11/17
units for patient size in report are m not cm
com/pixelmed/test/TestCTDose.java
---------------------
2010/11/17
when only processing or retrieving dose related series and instances, include non-specific SR SOP classes, not just RDSR SOP class
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/17
update DoseUtilityUsage webstart page with RDSR generation and registry submission and ftp configuration description
Makefile
webstart/DoseUtilityUsage.html
webstart/images/DoseUtilityLocalFTPConfiguration.png
webstart/images/DoseUtilityMainPanel.png
webstart/images/DoseUtilityRemoteFTPConfiguration.png
---------------------
2010/11/17
factor out list of webstart image, html and jnlp files to use for webstart and source release targets
Makefile
---------------------
2010/11/20
factor out option setting in XSL-T based SR validator to parameter set by caller, add an option to control case sensitivity of matching of code meanings, and use it with user-controlled checkbox in Doseutility because of excessive numver of warnings caused by different capitalization of X-Ray (see DICOM CP 1069)
com/pixelmed/apps/DoseUtility.java
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomSRValidator.java
---------------------
2010/11/21
don't abandon extraction on NumberFormatException from Double() constructor if tube current missing; also make protected get by event UID method public for testing
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2010/11/21
add a scan type of stationary, extract scan type when processing irradiation events, detect when stationary based on zero pitch if present (seen with Siemens) and use it to override unknown dose acquisition scan type when setting acquisition parameters; also discovered that for Siemens the same acquisition number will sometimes span localizers and non-localizers, so disambiguate multiple distinct acquisition parameter sets when choosing them based on acquisition number and prioritize non-localizers over localizers, but otherwise ignore that different sets of parameters are present in different reconstructed series for same nominal acquisition (choice of which to use is arbitrary); also disambigiate acquisition and series number lookup by study instance uid
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTScanType.java
---------------------
2010/11/21
do not include pitch factor in SR when scan type is stationary
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2010/11/23
factor out method to select only RDSRs from vector of file names
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/23
add constructors that take arrays or lists of DICOM file names
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2010/11/23
use refactored SetOfDicomFiles constructor that takes list argument
com/pixelmed/display/DicomCleaner.java
---------------------
2010/11/23
add feature to send RDSRs to remote DICOM node
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/24
need an empty constructor since no longer supplied implicitly because we have constructors with arguments
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2010/11/24
add HTML table formatted report option to DoseUtility, and necessary methods to generate HTML fragments in com.pixelmed.dose classes with accompanying tests
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2010/11/24
add deidentification options to only remove device and institution identity if requested, and change sense of series description flag in DicomCleaner
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomCleaner.java
---------------------
2010/11/24
record in derivation whether keepInstitutionIdentity used or not
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2010/11/24
add default option to deidentify while sending to registry, retaining UIDs, descriptions, patient characteristics, device identity and institution identity
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/24
implement CP 892 Add De-identifying Equipment to Contributing Equipment Sequence
com/pixelmed/apps/DoseUtility.java
com/pixelmed/display/DicomCleaner.java
---------------------
2010/11/24
Only remove ReferencedPerformedProcedureStepSequence if removing UIDs and not otherwise
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2010/11/25
add trefoil symbol from http://en.wikipedia.org/wiki/File:Radiation_warning_symbol.svg made into PNG in AI then pasted into icon PNG in Photoshop then used to make icns file using Icon Composer
icons/DoseUtility.icns
icons/DoseUtility.png
icons/Radiation_warning_symbol.png
icons/Radiation_warning_symbol.svg
---------------------
2010/11/25
use DoseUtility not DicomCleaner icomn when creating and cleaning Mac app
Makefile
---------------------
2010/11/25
update DoseUtilityUsage and images
webstart/DoseUtilityUsage.html
webstart/images/DoseUtilityCopyShortcut.png
webstart/images/DoseUtilityDoseSRTree.png
webstart/images/DoseUtilityDoseSRValidation.png
webstart/images/DoseUtilityDoseScreenImage.png
webstart/images/DoseUtilityLocalConfiguration.png
webstart/images/DoseUtilityLocalFTPConfiguration.png
webstart/images/DoseUtilityLogOfReport.png
webstart/images/DoseUtilityLogOfReportMultiple.png
webstart/images/DoseUtilityMainPanel.png
webstart/images/DoseUtilityRemoteFTPConfiguration.png
webstart/images/DoseUtilityShowVersion.png
---------------------
2010/11/25
tidy up some DicomCleanerUsage images
webstart/images/DicomCleanerCopyShortcut.png
webstart/images/DicomImageBlackoutColorUltrasound.png
webstart/images/DicomImageBlackoutOverlayDose.png
---------------------
2010/11/25
correct typo
webstart/DicomCleanerUsage.html
---------------------
2010/11/25
add Windows icons to use for desktop shortcuts for webstart, and additional instructions for DicomCleaner and DoseUtility
Makefile
icons/ConvertAmicasJPEG2000FilesetToDicom.icns
icons/ConvertAmicasJPEG2000FilesetToDicom.ico
icons/ConvertAmicasJPEG2000FilesetToDicom.png
icons/DicomCleaner.ico
icons/DicomImageBlackout.icns
icons/DicomImageBlackout.ico
icons/DicomImageBlackout.png
icons/DicomImageViewer.ico
icons/DoseUtility.ico
icons/MediaImporter.ico
icons/WatchFolderAndSend.icns
icons/WatchFolderAndSend.ico
webstart/DicomCleanerUsage.html
webstart/DoseUtilityUsage.html
webstart/images/DoseUtilityMacShortcutDialog.png
webstart/images/DoseUtilityMacShortcutDialogWithNameAndIcon.png
webstart/images/DoseUtilityMacShortcutIconDragged.png
webstart/images/DoseUtilityMacShortcutIconInstalled.png
webstart/images/DoseUtilityShortcutIconInstalled.png
---------------------
2010/11/25
update DicomCleaner webstart usage to describe new options
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanel.png
webstart/images/DicomCleanerMainPanelAfterClean.png
---------------------
2010/11/27
add column to record whether files copied or referenced in database, add remove capability to database tree (which required implementing MutableTreeNode), and use to implement local database purge feature in cleaner, viewer and dose utility, as well as updating all uses of insertObject() in other locations to be explicit about copy or reference, and deprecated non-specific insert method
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
---------------------
2010/11/27
stop divider in split pane in query/database tree browser between tree and attributes jumping around, by detecting resize event and forcing attribute pane to collapse
com/pixelmed/apps/DoseUtility.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/query/QueryTreeBrowser.java
---------------------
2010/11/27
pass FTP debug property to registry sender
com/pixelmed/apps/DoseUtility.java
---------------------
2010/11/27
allow for re-try in implicit (non-compliant with RFC 4217 and IHE REM) mode ftp if explicit mode fails to connect
com/pixelmed/ftp/FTPFileSender.java
---------------------
2010/11/27
add free scan type and detect it in GE SmartView series in dose screens
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
com/pixelmed/test/TestCTScanType.java
---------------------
2010/11/27
avoid null pointer exception if no event data to look at to override patient characteristics
com/pixelmed/dose/CompositeInstanceContext.java
---------------------
2010/11/27
always include acquisition parameters container in SR regardless, and put scanning length derived from scanning range OCR'd from screen if nothing available form slice images
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/test/TestCTDose.java
---------------------
2010/11/27
add GE Cine scan type as stationary
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/doseocrcheck.dat
com/pixelmed/test/TestCTScanType.java
---------------------
2010/11/28
com/pixelmed/dicom/StructuredReportTreeBrowser.java
---------------------
2010/11/28
add support for coding scheme identification sequence creation and extraction
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/Makefile
com/pixelmed/test/Makefile
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCodingScheme_AllTests.java
---------------------
2010/11/28
add utility to insert code sequence items
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/Makefile
---------------------
2010/11/29
correct typo in table header for time per rotation
com/pixelmed/dose/CTAcquisitionParameters.java
---------------------
2010/12/01
use single patient record in database and tree browser ignoring presence of trailing empty name component carets (000588)
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2010/12/01
comment out startup ftp remote host config message
com/pixelmed/ftp/FTPRemoteHostInformation.java
---------------------
2010/12/04
rebuild dictionary with no changes
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/01/14
improve cleaner documentation, describing steps, adding image showing pass through checkbox settings, and make headers H2 rather than H1, and fix some typos
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanelPassThru.png
---------------------
2011/01/14
add anchor for Blackout hyperlink
webstart/DicomCleanerUsage.html
---------------------
2011/01/14
more typos
webstart/DicomCleanerUsage.html
webstart/DoseUtilityUsage.html
---------------------
2011/01/19
Add Sup 142 data elements to dictionary and IODs
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2011/01/23
apply CP 1114 change to multiplier in dose units; check DLP and CTDIvol units when parsing SR; fix typo in exposure time per rotation heading
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/01/23
Add file to store private PMP codes as context groups
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2011/01/23
Add Sup 142 and additional PMP private codes for deidentification method code sequence
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2011/01/23
tidy up javadoc
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2011/01/24
add data elements to dictionary for CP 1037 and 1080
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/01/28
correct data element tag for ImplantTemplateGroupName (sup131_ft3)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/01/28
add cp 1044, sup 96 data elements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/02/04
return DicomFile when adding a file to a SetOfDicomFiles, since its attributes may be useful to the caller of the add() method, e.g., to keep track of mappings from attributes to files
com/pixelmed/dicom/SetOfDicomFiles.java
---------------------
2011/02/04
start to work on making SR ContentItems mutable in place, by adding a setConceptValue() method to string valued content items
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2011/02/11
add support for returning CodeMeaning rather than null for concept value for CODE content item in getSingleStringValueOrNullOfNamedChild() convenience method
com/pixelmed/dicom/ContentItem.java
---------------------
2011/02/12
add javac option for full debug information for coverage with emma
Makefile.common.mk
---------------------
2011/02/13
correct failure of TextAttribute and StringAttribute to write() when a multi-byte character set string value has been set or added, due to the VL being number of characters not bytes (000590)
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
---------------------
2011/02/13
Allow has properties person name children for person participant relationships in TID 1020 in Dose SR, as well as basic text, enhanced and comprehensive SR (CP 1076)
com/pixelmed/test/TestCTDose.java
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/02/15
add test for deefault character set
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
---------------------
2011/02/18
Start work on automated regression tests of DicomCleaner using network transfer and GUI injection
com/pixelmed/test/Makefile
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/UserInterfaceUtilities.java
---------------------
2011/02/20
add dialog searching code, perform dialog actions, and add SCP to listen for cleaned images
com/pixelmed/test/Makefile
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/UserInterfaceUtilities.java
---------------------
2011/02/21
center dialogs in main frame where possible
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
---------------------
2011/03/03
handle illegal DICOM files with implicit VR elements mixed within explicit VR transfer syntax (DicomWorks deidentification defect)
com/pixelmed/dicom/AttributeList.java
---------------------
2011/03/03
add cleaner tests using automation of send and receive
com/pixelmed/test/Makefile
com/pixelmed/test/TestCleanerReceiveAndClean.java
---------------------
2011/03/03
start factoring out application text strings into property file resource bundles for localization
Makefile
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2011/03/04
add application to merge composite context at patient level when inconsistent between instances of same patient, as determined by being same study or referencing each others SOP Instance UIDs
com/pixelmed/apps/Makefile
com/pixelmed/apps/MergeCompositeContext.java
---------------------
2011/03/08
tidy up javadoc
com/pixelmed/apps/MergeCompositeContext.java
---------------------
2011/03/08
temporarily disable (incomplete) Japanese translations for web start release
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2011/03/15
removing debugging message
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
---------------------
2011/03/22
make sure image pixel min and max do not include padding values else mess up statistical default windows
com/pixelmed/display/SourceImage.java
---------------------
2011/03/22
detect screen saved GE dose screens that are in series 10999, and add dummy padding value of -32768 since otherwise will not threshold properly (depends on earlier change to SourceImage not including padding values in image min and max)
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2011/03/23
correct constructor to not use application name that is now supplied in resources
com/pixelmed/test/TestCleanerReceiveAndClean.java
---------------------
2011/03/23
improve text strings in Japanese resources
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2011/03/23
use resigned JAI jars from pixelmed not java.net site, since certificate has expired and gives warning
Makefile
webstart/jai-imageio-1.1_DAC.jnlp
---------------------
2011/03/24
background dose reporter that sends to registry
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/Makefile
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/24
make some methods for getting column names public, and add a minimal information model to used, for example, as a persistent queue
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/Makefile
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
---------------------
2011/03/24
select SR files to send, prefer original manufacturers' versions over OCR'd versions if both present, and wait for an interval before processing
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/Makefile
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/24
add polled query of remote AEs
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/25
query for multiple days backwards from today, add option to retain deidentified files, tidy up debugging messages
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/26
fix javadoc typo
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2011/03/26
be more selective about which files to include in rebuild
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
---------------------
2011/03/26
add multiple modality simulator that uses existing database of images as source of simulation for populating PACS with daily work load
com/pixelmed/apps/Makefile
com/pixelmed/apps/MultiModalitySimulator.java
---------------------
2011/03/26
add modalities in study filter to query
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
---------------------
2011/03/26
test with simulated PACS
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/26
explain property for number of days back
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/26
more filter patterns
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
---------------------
2011/03/26
identify HTML character set as UTF-8, else strings with accents do not render properly in browser
com/pixelmed/web/AppletDisplayTemplate.tpl
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
---------------------
2011/03/26
make names proper DICOM form
com/pixelmed/apps/MultiModalitySimulator.java
---------------------
2011/03/26
sort patient list by ID in web server
com/pixelmed/web/PatientListRequestHandler.java
---------------------
2011/03/27
add recovery for transient failures to send to repository at per instance level, and also purge unneeded legacy OCR'd SRs from database when processing for sending
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
---------------------
2011/03/27
discard but register non-RDSR SR files (else keeps retrieiving them again); clean up debugging levels
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/03/27
keep track of whether instance is dose SR or not in database, to make consistent the pattern of sending both real RDSRs and other SR SOP Classes with the correct document title (which were being saved but not sent)
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
---------------------
2011/03/27
document and reorganize properties and suggest plausible production values
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/04/04
note that CP 1075 was cancelled, because unnecessary
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/04/04
add dose OCR service
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/Makefile
---------------------
2011/04/04
increase memory for server apps
com/pixelmed/server/Makefile
---------------------
2011/04/04
use experimental simulator properties
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/04/04
use experimental settings
com/pixelmed/apps/Makefile
---------------------
2011/04/04
start to clean up database including properties for hsqldb 2.x, removal of explicit lengths for VARCHAR and properties for 2.x to allow that, primary key change from CHAR to VARCHAR, and specification of column names as upper case in the first place for consistency with names returned in result sets, rather than requiring callers to call toUpperCase() every time, and use of upper rather than lower case string values for boolean SQL types
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/MacOS/JavaApplicationStub
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequestHandler.java
---------------------
2011/04/06
update data elements, sop classes and transfer syntaxes after WG 6 2011/04
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2011/04/06
BUILDATE is not needed in source archive and may not be available
Makefile
---------------------
2011/04/20
add junit library to repository
lib/junit/junit-4.8.1.jar
---------------------
2011/04/20
time database rebuild; read file only as far as pixel data, ten fold increase in speed on medconn mix
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
---------------------
2011/04/20
read file only as far as pixel data when inserting into database (including javadoc example)
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/network/ReceivedObjectHandler.java
---------------------
2011/04/21
avoiding throwing exception when instance number missing when comparing sort order for image request
com/pixelmed/web/ImageDisplayRequestHandler.java
---------------------
2011/04/21
do not display exception when image is potentially legitimately missing geometry information
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2011/04/21
support C-GET when SOPClassUID not present in C-FIND by using SOPClassesInStudy or guessing from Modality or using all storage SOP Classes known; includes adding listing of plausible SOP Classes by Modality to com.pixelmed.dicom.SOPClass; also revise verbosity levels and time retrievals
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/dicom/SOPClass.java
---------------------
2011/04/24
use comma delimiters for large numbers in performance figures, and total across all retrievals
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2011/04/24
use acquisition time to separate multiple passes within a single series as distinct irradiation event UIDs (and use generated UID rather than series number when possible), and add regression tests for GE and Siemens patterns of irradiatin event data from images
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
---------------------
2011/04/24
tidy up javadoc (use # not . between class and method in fully qualified external reference as described in http://download.oracle.com/javase/1.5.0/docs/tooldocs/windows/javadoc.html#@see)
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2011/04/24
add regression testing of generated SRs from real dose screens
com/pixelmed/doseocr/Makefile
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.DicomSRValidator.log
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dciodvfy.log
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dciodvfy.log
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.dciodvfy.log
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/04/24
unsuccessful experiments at MacOSX events for DoseUtility
Makefile
DoseUtility.app/Contents/Info.plist
ECGViewer.app/Contents/MacOS/JavaApplicationStub
com/pixelmed/apps/DoseUtility.java
---------------------
2011/04/27
add some more neck, chest and abdomen synonyms
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2011/04/27
provide string value access method for UN VR to allow access to private data elements in implicit VR (000593) - relatively crude and ignores delimiters and specific character set
com/pixelmed/dicom/UnknownAttribute.java
---------------------
2011/04/28
do not need to copy test file to EVRLE any more, since providing string value access method for UN VR to allow access to private data elements in implicit VR (000593)
com/pixelmed/test/Makefile
---------------------
2011/04/28
add Polish chest, abdomen and pelvis
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2011/04/28
rewrite irradiation event extraction logic to separate overlapping scan ranges by walking through acquisition time then scan location; make internal methods private rather than protcted to simplify documentation of public interface; clean up some exceptions when missing or multiple screens; relocate test images; add SOPClassUID to irraditation event tests since now filters files by SOPClass
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
---------------------
2011/04/30
add DICONDE standard data elements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/05/01
make sure to remove CHANGES in case cvsps is not installed else uses old file
Makefile
---------------------
2011/05/01
correct spelling in properties description
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/05/01
tidy up debugging output, move testresults folder and factor out path as common Makefile parameter
Makefile.common.mk
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/Makefile
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.DicomSRValidator.log(DEAD)
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log(DEAD)
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dciodvfy.log(DEAD)
testpaths/testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log(DEAD)
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log(DEAD)
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log(DEAD)
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dciodvfy.log(DEAD)
testpaths/testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log(DEAD)
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log(DEAD)
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.build.log(DEAD)
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.dciodvfy.log(DEAD)
testpaths/testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log(DEAD)
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log
testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testresults/testphilipsonedcm/dosesrfile.dcm.dciodvfy.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/05/02
tidy up javadoc
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2011/05/04
add support for combining anatomic concepts for contiguous body regions and use it when extracting anatomy from images for irradiation events
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/Makefile
com/pixelmed/test/Makefile
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
---------------------
2011/05/04
include aliases for old keywords (pre CP 850) in generated Java dictionary, in order to support code compiled against releases prior to 20100206 release
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/05/06
add equality() and hashCode() basde on list content to CompositeInstanceContext, and add methods to remove all but patient, and all but patient and study
com/pixelmed/dose/CompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
---------------------
2011/05/06
factor out composite instance context tests into separate test suite than with CT dose
com/pixelmed/test/Makefile
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
---------------------
2011/05/06
add support for combining anatomic concepts for contiguous body regions and use it when extracting anatomy from images for irradiation events
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
---------------------
2011/05/06
factor out generic from dose-specific CompositeInstanceContext and put one in dicom package and the other in dose package (renaming the latter to avoid ambiguity when both packages imported)
Makefile
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/dicom/Makefile
com/pixelmed/dose/CompositeInstanceContext.java(DEAD)
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/Makefile
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2011/05/12
add some more convenience methods to read meta information header attributes from file
com/pixelmed/dicom/AttributeList.java
---------------------
2011/05/12
do not read pixel data for command line invocation of validator ... just wastes or runs out of memory and is slow ... make PixelData attribute non-mandatory in IOD defintions so as not to complain whether present or absent
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/DicomInstanceValidator.java
---------------------
2011/05/16
add randomized worklist types
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2011/05/23
detect ORIGINAL frame type condition in MR spectroscopy objects for MR transmit and receive coil macros (000594)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2011/05/25
add button to black out and save all remaining images
com/pixelmed/display/DicomImageBlackout.java
---------------------
2011/05/25
com/pixelmed/display/DicomImageViewer.java
---------------------
2011/05/25
experiment with 'bad' single bit image bit order
com/pixelmed/display/SourceImage.java
---------------------
2011/05/25
capitalize code meaning for 121017 per submitted CP
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/05/25
correct geometry 2D to 3D conversions to account for sub-pixel resolution for 2D coordinates
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
---------------------
2011/05/25
capitalize code meaning for 121017 per submitted CP
com/pixelmed/dose/RecordingDeviceObserverContext.java
---------------------
2011/05/27
capitalize code meaning for 121017 per submitted CP
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/05/29
update dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/06/06
allow deidentification method description and code to be present even if other is not present condition not satisfied, per Sup 142
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2011/06/06
clean up message
com/pixelmed/display/SourceImage.java
---------------------
2011/06/06
leave large OX PixelData on disk even when using BufferedInputStream (000596)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/BinaryInputStream.java
---------------------
2011/06/07
Do not attempt to send instances or open an association with no presentation contexts if no instances to actually send (000597)
com/pixelmed/apps/DoseUtility.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2011/06/07
timing experiment
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2011/06/07
make graphic lines display not image relative thickness (000598)
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2011/06/07
add more numeric key magnifying shortcuts
com/pixelmed/display/SingleImagePanel.java
---------------------
2011/06/14
add test case for OCR in which adding PixelPaddingValue outside valid pixel range causes problems, and make the application of pixel padding handle both cases (in range and out of range); also defer debuggin messages for OCR glyph loading to higher debugging level
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/SourceImage.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2011/06/14
add a webstart entry for an experimental cleaner build
webstart/DicomCleanerExperimental.html
webstart/DicomCleanerExperimental.jnlp
---------------------
2011/06/16
add experimental webstart link for viewer, and debugging message for interpolation type in resampleWithGraphicsDraw
com/pixelmed/display/BufferedImageUtilities.java
webstart/DicomImageViewerExperimental.html
webstart/DicomImageViewerExperimental.jnlp
---------------------
2011/06/16
restore interpolation and turn off interpolation and pixel padding and min/max debugging messages
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SourceImage.java
---------------------
2011/06/21
correct typo in comment
com/pixelmed/network/AssociationFactory.java
---------------------
2011/06/21
make public the command request and response message classes and the constructor in the composite response handler, to allow code outside the package to build a simple SCUs and SCPs rather than depending on the provided SCU and SCP classes
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
---------------------
2011/06/21
parameterize copy methods to allow for different size buffered streams or to not interpose buffered streams at all for performance testing, and default to unbuffered
com/pixelmed/utils/CopyStream.java
---------------------
2011/06/21
add option of using asynchronous IO while handling incoming C-STORE bulk data, to decouple network read from file write, since sometimes slow wire transfer rate, and mess with various related debugging level settings
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2011/06/21
tidy up javadoc
com/pixelmed/dicom/AsynchronousOutputStream.java
---------------------
2011/06/21
update copyright notice with current date
COPYRIGHT
---------------------
2011/06/26
remove debugging messages for release
com/pixelmed/display/SourceImage.java
---------------------
2011/06/30
add utility to convert palette color to grayscale
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/Makefile
---------------------
2011/07/09
refactor version from display application to dicom package to make it available for headless code
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/display/ApplicationFrame.java
---------------------
2011/07/09
include clinical trial patient module in composite instance context
com/pixelmed/dicom/CompositeInstanceContext.java
---------------------
2011/07/09
allow multiple source directories, process context in supplied order, and merge context as relationships become apparent through references encountered later
com/pixelmed/apps/Makefile
com/pixelmed/apps/MergeCompositeContext.java
---------------------
2011/07/09
update data dictionary with 2011 supplements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/07/10
expose internal methods used in hierarchical move, so that they can be re-used by other apps
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2011/07/10
user hierarchical structire for destination folder
com/pixelmed/apps/MergeCompositeContext.java
---------------------
2011/07/14
exposure index etc are DS not FD (CP 1024)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/07/14
remove 'unified' from names of various attributes (per Sup 96 FT)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/07/16
measure transfer time
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2011/07/16
implement CP 1068 scanning length template, both in validator as well as in dose classes and OCR, trying to use the actual image range (plus thickness), the scan range from the dose screens if not actual images (recognizing that the reconstructable volume will be short by one slice thickness due to limited information), and only override the range with the DLP-derived value if it is greater (e.g., for helical overranging) to allow for skip (e.g., for sequenced acquisitions), and try to do the same for the exposure dose sequence values using the specified scan length
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/07/16
do not throw null pointer exception for dose screens with missing scan range when computing scanning length
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2011/07/16
add CP 1107 LB feature using private PMP codes to label irradiation events
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2011/07/17
fix silly bug in ScanRange test that compared string literal pool handles rather than string value equality for S and I modifiers when computing absolute range
com/pixelmed/dose/ScanRange.java
com/pixelmed/test/TestScanRange.java
---------------------
2011/07/17
add some debugging messages
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/OCR.java
---------------------
2011/07/17
use equals() rather than == just in case in tracking encoding in SpecificCharacterSet class, even though probably OK since private to class - should fix this to use an enumeration
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
---------------------
2011/07/17
add CP 1107 LB feature using private PMP codes to label irradiation events, and include in validator (temporarily, until FT)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/07/17
factor out reusable getSingleStringValueOrNull() method from getSingleStringValueOrNullOfNamedChild()
com/pixelmed/dicom/ContentItem.java
---------------------
2011/07/17
make round trip SR to CTDose to SR test really work by implementing rebuild flag to constructor, and fix identified gaps in round trip related to device and person observer stuff not being de-serialized from SR
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/test/TestCTDose.java
---------------------
2011/07/17
add classes, tests and validation for CT Dose Check RDSR feature (CP 1047)
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/Makefile
com/pixelmed/doseocr/Makefile
com/pixelmed/test/TestCTDose.java
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/08/03
Correct wrong code used in RDSR DoseCheck CTDIvol forward notification conditions (000599)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/08/03
Do not complain about missing device info in TID 10013 since OK since CP 1065 in RDSR validator; also fix TID 10002 and 10003 and add CID 7445 as per CP 1065 (000600)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/08/04
Additional sources of information in radiation dose reports (CP 1070)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2011/08/04
Additional sources of information in radiation dose reports (CP 1070)
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/Makefile
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestSourceOfDoseInformation.java
---------------------
2011/08/08
add support for echecking condition on UC type content items and complain if present without mbpo
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2011/08/08
add additional signature reasons and numeric time point observations for clinical trial results; also needed to change a UC to U where the condition was real world and too hard else caused error in styleshett compilation now that UC is supported
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/08/08
support palettes larger than 256 entries, and also add contributing equipment (000603)
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
---------------------
2011/08/22
update data dictionary (only) for CPs for FT Aug 2011 WG 6 meeting
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/08/25
add more time point observations and change pseudo-progression to yes/no question style with post-baseline check; note that using conceptNameCID did NOT work with UC condition on same type of content item, so fully enumerated concepts in CID (see defect 000604)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/08/31
add utility to convert planar configuration (000605)
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/Makefile
---------------------
2011/08/31
Support display of YBR_FULL (uncompressed) color images (000515)
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2011/08/31
Use correct color (black) for background when blacking out YBR images (000517)
com/pixelmed/display/ImageEditUtilities.java
---------------------
2011/08/31
Add application to convert YBR_FULL to RGB (000606)
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/Makefile
---------------------
2011/08/31
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2011/08/31
tidy up javadoc
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2011/09/01
Implement irradiation event label CP 1107 FT to replace LB with PMP codes
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/09/01
Include CP 1107 irradiation event label and CP 1068 scanning length template in test results
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log
testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/09/01
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2011/09/01
Sup 152 FT ophthalmic thickness map dictionary and SOP class
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/09/02
Add ability to toggle display shutter application on or off (000608)
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/Makefile
---------------------
2011/09/02
do not hide identity information behind display shutters when blacking out (000607)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2011/09/03
Change to using stock jmdns 3.4.1, which required compensation for some API changes to compile and run (000609),(000610),(000611); also added (new) persistent flag to requestServiceInfo, which seems to make detection of services more reliable (000612)
README
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
lib/additional/jmdns.jar
---------------------
2011/09/04
Add tests for multiple identical DICOMDIR records, make DicomDirectoryRecordFactory inner classes for each reecord type public so that they are accessible for the tests, disambiguate two otherwise identical directory record nodes in the Set in which they are maintained so that the children of all the duplicate records are shown, not just one of them (000614); an alternative fix would have been to merge the child lists on adding duplicate parents, but that would loose visibility of the actual encoded structure
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
---------------------
2011/09/04
Add a method to know when ready to receive (000616)
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2011/09/04
do not depend on existing DicomCleaner properties, but add our own for the test, saving and restoring whatever was there before (000617)
com/pixelmed/test/Makefile
com/pixelmed/test/TestCleaner.properties
---------------------
2011/09/04
do not activate jmdns for cleaner test, since may cause default send target to not be the desired target (000615); also test for SCP actually being ready, though this was not the problem in this case
com/pixelmed/test/Makefile
com/pixelmed/test/TestCleanerReceiveAndClean.java
---------------------
2011/09/07
update JIIO binary builds pointer since java.net got all messed up
README
---------------------
2011/09/21
Correct wrong VM for DeviceObserverIdentifyingAttributes Row 7 and wrong CID number (000618)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/09/28
unjar and re-jar jmdns sign it will not sign for webstart due to duplicate classes
lib/additional/jmdns.jar
webstart/NOTES.signingjmdns
---------------------
2011/10/24
apply CP 1114 change to multiplier in dose units for projection x-ray dose templates
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/10/29
update DICONDE; add (restore from trial) Observation UID (per CP 1147)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2011/11/01
Add mechanism to detect association release as SCP, as trigger to process received objects as a set (000626)
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
---------------------
2011/11/01
Do not wait for ARTIM before closing connection if already closed by other end (000627)
com/pixelmed/network/Association.java
---------------------
2011/11/06
work on Toshiba dose screen glyphs and spacing
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/11/06
work on Toshiba dose screen glyphs and spacing
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/11/06
work on Toshiba dose screen glyphs and spacing
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/11/06
work on Toshiba dose screen glyphs and spacing
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/11/06
work on Toshiba dose screen glyphs and spacing
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/11/06
work on Toshiba dose screen glyphs and spacing - different font
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/11/07
recognizing toshiba dose series and screens; using manufacturer data element if known; toshiba tests
com/pixelmed/apps/DoseUtility.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/07
recognizing toshiba dose series and screens; using manufacturer data element if known; toshiba tests
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/09
add recognizer for single line Toshiba dose pattern
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/09
Treat two periods as colon for Toshiba total screens
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/09
Track numbered protocol entries Toshiba detail screens
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/09
Tolerate .e suffix on CTDIvol and DLP parameter names in Toshiba total screens
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/10
multiline Toshiba pattern
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/11
Allow series 503 for Siemens dose screen as well as 501
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/11
For Toshiba require series 1000, otherwise will return every CT image, esp. when Manufacturer not returned in query response
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/15
add dump method separate from toString
com/pixelmed/database/DatabaseTreeRecord.java
---------------------
2011/11/19
add window to query for Toshiba, though unlikely to be returned
com/pixelmed/apps/DoseUtility.java
---------------------
2011/11/19
check supplied screen path is file not folder, restore default behavior of GE when non-DICOM screen image file, add debug level to older tests to get output
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/19
add content date and time to instance level composite context, e.g., to propagate from dose screen to generated RDSR
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
---------------------
2011/11/20
allow selection of phantom from head or body description with trailing numeric size, e.g. for toshiba
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/test/TestCTPhantomType.java
---------------------
2011/11/20
add toshiba localizer description
com/pixelmed/dose/CTScanType.java
com/pixelmed/test/TestCTScanType.java
---------------------
2011/11/20
add multipage support to OCR class to support Toshiba
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/21
add methods to extract binary float and double values from UN VR to assist with reading private attribute values
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
---------------------
2011/11/23
add Toshiba CTDIvol and DLP from images
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/11/23
add multifile (multipage) support to OCR main method and constructors for Toshiba
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/24
use Z location when SliceLocation missing when extracting irradiation event from slices and partitioning into ranges
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/11/24
use explicitly specified dose screen file if supplied
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/24
add mutiple page handling to report generation
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2011/11/24
factor out common report fragment and context setting stuff
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2011/11/24
add a pattern to totalDLP from single page format for Toshiba; also correct max arg number for main method in javadoc
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/11/25
add another toshiba pattern with start and end positions on detail screen, additional scan types
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestScanRange.java
---------------------
2011/11/25
add multipage RDSR generation for Toshiba
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/Makefile
---------------------
2011/11/25
delay processing for multipage screens based on NumberOfSeriesRelatedInstances for Toshiba; also separate out network debugging flag
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
---------------------
2011/11/25
add manufacturer and model to rendered report and get it from header or device observer; populate header from device observer if necessary; include abbreviation of source in rendered report
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/doseocr/Makefile
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestSourceOfDoseInformation.java
---------------------
2011/11/25
do not add the optional irradiation event label if we do not have a value for it
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2011/11/25
process files by series after timeout if no NumberOfSeriesRelatedInstances
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
---------------------
2011/11/27
add multi-page support by deferring OCR until SR sending step
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/testdosereporter.properties
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
---------------------
2011/11/27
Add toshiba and multi-page and other useful class info to html page
webstart/DoseUtilityUsage.html
---------------------
2011/11/27
add support for more toshiba (ACR DIR sample) patterns
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/01
increase stack size for webstart DoseUtility else overflows during OCR on Windows sometimes
webstart/DoseUtility.jnlp
webstart/DoseUtilityExperimental.html
webstart/DoseUtilityExperimental.jnlp
---------------------
2011/12/04
be more selective about creating content items when content missing to allow for full fidelity round trip
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2011/12/04
add support for separate head and body total DLP in same study, as well as OCR patterns for toshiba examples of such
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2011/12/04
another multi-line Toshiba pattern, which sometime has lines left out
com/pixelmed/doseocr/Makefile
---------------------
2011/12/04
another multi-line Toshiba pattern, which sometime has lines left out
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/04
two line toshiba pattern with just dose reduction on second line
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/04
add toshiba five (!) line detail pattern
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/04
add more toshiba series patterns (9000, summary)
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/04
yet another Toshiba pattern, single line with SD, CTDIvol and DLP
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/12/04
another toshiba single line pattern
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/04
handle i in Exposure Time being split into i and period when lower case
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/04
another toshiba pattern with one line exposure time, ctdivol, dlp, sd and volume scan type
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/12/04
another toshiba single line pattern, with mean after CTDIvol.e
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2011/12/04
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/12/08
increase stack size for webstart DoseUtility else overflows during OCR on Windows sometimes
DoseUtilityAssumingJREInstalled.bat
DoseUtilityWithOwnJRE.bat
---------------------
2011/12/19
increase stack size more
webstart/DoseUtility.jnlp
---------------------
2011/12/19
additional derived calculations at time point and per measurement, acquisition date alias, subject and protocol context, correct code meaning that was too long
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/12/19
acquisition date aloas condition needs to check for date not code
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/12/19
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/12/19
add mandatory requirement type missing from templates in trials results, and make worklist dependent content items in subject and protocol context U rather than M
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2011/12/23
detect GE screen even if missing ImageType attribute; set scan type to stationary if scan range is zero
com/pixelmed/dose/ScanRange.java
com/pixelmed/doseocr/OCR.java
---------------------
2011/12/23
add to bad words list so chest is not spuriously detected
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2011/12/23
extract GE ExposureDoseSequence present in newer dose screens
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2011/12/23
rename getCTDoseFromPhilipsDoseScreen() to getCTDoseFromExposureDoseSequence() since no longer Philips-specific
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2011/12/23
consistent sort order of events for log
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/12/23
Merge acquisition parameters from GE ExposureDoseSequence if present in screen during OCR
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDoseAcquisition.java
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.build.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dciodvfy.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/23
set scan type to stationary if scan range is zero
com/pixelmed/doseocr/doseocrcheck.dat
---------------------
2011/12/23
add GE SmartStep
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2011/12/25
open external sql access to instance database
com/pixelmed/apps/DoseUtility.java
---------------------
2011/12/25
add test case for GE with head and body in same study
com/pixelmed/doseocr/Makefile
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dciodvfy.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/25
do not assume anything about maximum tube current if absent
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2011/12/25
do not assume anything about maximum tube current if absent
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.build.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log
testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/25
merge acquisition parameters if obtained from images and exposure dose sequence in screen
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/doseocr/Makefile
com/pixelmed/test/TestCTAcquisitionParameters.java
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dciodvfy.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/26
handle GE cardiac helical scan type, and allow for matching of axial and stationary when merging exposure dose sequence values
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.build.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dciodvfy.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/26
remove group lengths (which are no longer valid) from nested sequences when copying lists in composite context
com/pixelmed/dicom/CompositeInstanceContext.java
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dciodvfy.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.dciodvfy.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/26
include dcdump in SR regression tests
com/pixelmed/doseocr/Makefile
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/26
tidy up documentation
com/pixelmed/apps/testdosereporter.properties
---------------------
2011/12/26
include Contributing Equipment Sequence in RDSR
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/dose/CTDose.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/27
rename ExposureDoseSequence method
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2011/12/27
add command line options to minimize heap usage for large dose utility runs
com/pixelmed/apps/Makefile
---------------------
2011/12/27
use minimal database for DoseUtility and add necessary attributes to it
com/pixelmed/apps/DoseUtility.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
---------------------
2011/12/27
rename ExposureDoseSequence method
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
---------------------
2011/12/27
do not throw exception whilst reporting when datetime is too short
com/pixelmed/dose/CTDose.java
---------------------
2011/12/27
improve main method for testing by having it optionally write the RDSR file
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/Makefile
---------------------
2011/12/27
improve main method for testing by having it optionally write the RDSR file
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
---------------------
2011/12/27
improve main method for testing by controlling summary and format
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/RenderedDoseReport.java
---------------------
2011/12/27
prevent infinite loop processing files due to illegal DICOMDIR with null ReferencedFileID by both detecting the cause (000645) and checking for directory rather than file references and repeat requests to process files already done
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/12/27
handle comparison without throwing null pointer exception when some CTAcquisitionParameters are null, strengthen parameter type of equalsApartFromIrradiationEventUID() method since no need for generic type, and refactor equals() method to re-use rather than repeat equalsApartFromIrradiationEventUID()
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTAcquisitionParameters.java
---------------------
2011/12/28
handle space filled string values where double is expected as zero when extracting irradiation event values
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/12/28
Be more selective about copying Request Attributes Sequence values into Referenced Request Sequence and account for attribute requirement types when creating composite context that includes SR Document General module
com/pixelmed/dicom/CompositeInstanceContext.java
---------------------
2011/12/28
when there is no per-acquisition anatomy available, use a common anatomy extracted from either the common attribute list or the irradiation events or both if they can be combined, rather than just assuming entire body
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
---------------------
2011/12/28
be sure to extract and organize before trying to return earliest and latest acquisition datetimes for study (i.e., happens lazily so check flags)
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/12/28
disambiguate multiple irradiation events with same key for acquisition parameters by only using axials and choosing that with the longest reconstruction
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
---------------------
2011/12/28
disambiguate multiple irradiation events with same key for acquisition parameters by only using axials and choosing that with the longest reconstruction
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
---------------------
2011/12/28
when there is no per-acquisition anatomy available, use a common anatomy extracted from either the common attribute list or the irradiation events or both if they can be combined, rather than just assuming entire body
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2011/12/29
add neck and larynx translations
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2011/12/29
tidy up javadoc
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2011/12/29
Change to typed generic form of TreeMap parent class of AttributeList, removed redundant untyped put() method that now has same erasure, type Iterators and remove class cast from next() methods, and use enhanced for loops in place of Iterators except when remove() is used
com/pixelmed/dicom/AttributeList.java
---------------------
2011/12/29
improved anatomy using common default of not present per acquisition, more anatomical terms recognized, more constrained population of Referenced Request Sequence, incorporation of orientation when considering acquisiton parameters from irradiation events
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dciodvfy.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dciodvfy.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dciodvfy.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.dciodvfy.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2011/12/29
add frame set test case and populate per-frame with all non-sequence top-level attributes that are not handled specially and recurse in main method to find files
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SetOfFrameSets.java
---------------------
2011/12/29
add method to detect meta information group
com/pixelmed/dicom/AttributeTag.java
---------------------
2011/12/29
index by tag rather than keyword, use only string values for now, cache keywords for toString() methods
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/SetOfFrameSets.java
---------------------
2012/01/05
change liver code to T-62000 from T-62002, which CP 722 should have done
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2012/01/11
Use called, not calling, AET in file meta-information of stored images when using C-GET (000646)
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2012/01/19
extract shared attributes
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
---------------------
2012/01/19
index frames within set by SOPInstanceUID, and add extraction of sort order based on InstancNumber
com/pixelmed/dicom/FrameSet.java
---------------------
2012/01/19
handle exception if missing SOPInstanceUID; add SeriesNumber to sort since may be multiple series in one FrameSet
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SetOfFrameSets.java
---------------------
2012/01/28
ignore group lengths in frame sets
com/pixelmed/dicom/FrameSet.java
---------------------
2012/01/28
add file command line argument and more heap for ECG viewer script
ECGViewer.sh
---------------------
2012/01/28
add script to invoke DICOMDIR/SR/IMAGE/SCOPRD test browser
DicomBrowser.sh
---------------------
2012/01/31
add shell script for move into hierarchy
MoveDicomFilesIntoHierarchy.sh
---------------------
2012/02/01
Prevent DecimalString.addValue(double) from failing when default Locales with different decimal point character are in use (000648)
com/pixelmed/test/Makefile
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/utils/FloatFormatter.java
---------------------
2012/02/01
make control over Locale-related behavior of FloatFormatter explicit, using the default (not Locale.US) if not explicitly specified in method invocation)
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/utils/FloatFormatter.java
---------------------
2012/02/01
make double constructor for NumericContentItem generate correct decimal string value when in non-default Locale that affects float formatting
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
---------------------
2012/02/01
use Locale.US in toString() and XMLRepresentationOfStructuredReportObjectFactory node creation methods for SCOORD coordinates to assure period is always returned as decimal point regardless of default Locale; also fix XMLRepresentationOfStructuredReportObjectFactory to create correct strings when toLowerCase() is affected by default Locale (as it is for Turkish Locales), which was encountered in testing the SCOORD node creation method using XPath to extract the result (000649)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
---------------------
2012/02/01
Change all upper and lower case conversions to use Locale.US rather than the default Locale, to avoid problems when the default is Turkish (000650)
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/Syslog.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/WadoRequest.java
---------------------
2012/02/01
Change all current uses of FloatFormatter.toString() methods to use Locale.US explicitly to avoid decimal point problems, including the status updates in SingleImagePanel (which could arguably have been left localized)
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2012/02/01
Change all current uses of NumberFormat.getInstance() to use Locale.US explicitly to avoid decimal point problems, all of which are in com.pixemed.dose, and use the French Locale for all the dose tests to force checking that it works
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestScanRange.java
---------------------
2012/02/02
extend SUV calculations to derive SUVlbm, SUVbsa and SUVibw if sufficient information
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
---------------------
2012/02/08
implement (some of) the unable to measure lesion conditions; condition modality, acquisition date and alias, and measurement object type on not being unmeasurable or unevaluable (!)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2012/02/18
add experimental TCGA context group
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2012/02/18
Switch to using deployJava.js from java.com to do auto-install; works on Safari as well as other platforms that were OK before
webstart/ConvertAmicasJPEG2000FilesetToDicom.html
webstart/DicomCleaner.html
webstart/DicomCleanerUsage.html
webstart/DicomImageBlackout.html
webstart/DicomImageViewer.html
webstart/DoseUtility.html
webstart/DoseUtilityUsage.html
webstart/ECGViewer.html
webstart/MediaImporter.html
webstart/WatchFolderAndSend.html
---------------------
2012/02/18
Be tolerant of inability to load BUILDDATE file from jar file
com/pixelmed/dicom/VersionAndConstants.java
---------------------
2012/03/02
Handle -ve VOI LUT Descriptor -ve first value mapped when no explicit SS VR (000652)
com/pixelmed/dicom/VOITransform.java
---------------------
2012/03/12
add Philips private SOP Classes from interventional workstation
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2012/03/12
update DICOM dictionary with surface segmentation elements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2012/03/14
tolerate null arguments when dumping
com/pixelmed/geometry/LocalizerPosterFactory.java
---------------------
2012/03/14
add a method to return the geometry of a slngle slice to avoid having to repeat the common pattern of getting the array and checking the index bounds
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2012/03/14
add debugging messages related to SR annotation shape extraction
com/pixelmed/display/DicomBrowser.java
---------------------
2012/03/14
start work in superimposed image extraction and display to support segmentation display
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedImage.java
---------------------
2012/03/14
test frameset extraction on QIBA CT 1B images
com/pixelmed/dicom/Makefile
---------------------
2012/03/20
Add known safe Hologic mammo attributes including private tomo encoded pixel data, and since this is first use of known safe private sequences with content that may be unsafe, add recursion through unremoved private sequences to remove unsafe method
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2012/03/20
Add checkbox to use hierarchical folders and files when exporting, and tooltip warning about the dangers of it
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2012/03/24
more safe Hologic mammo private attributes
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2012/03/24
check coding scheme as well as code value, and experiment with different XPath and procedural accessors for TotalDLP in support of AM post (http://www.auntminnie.com/forum/tm.aspx?m=342290)
com/pixelmed/test/TestCTDose.java
---------------------
2012/03/25
tidy up javadoc
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2012/03/25
use environment variable for home directory in tests
com/pixelmed/dicom/Makefile
---------------------
2012/03/25
use environment variable for home directory in tests
com/pixelmed/anatproc/Makefile
com/pixelmed/apps/Makefile
com/pixelmed/display/Makefile
---------------------
2012/03/25
tidy up javadoc
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2012/03/25
tidy up private extraction method names in FrameSet
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/SetOfFrameSets.java
---------------------
2012/03/26
Create enhanced images from classic single frame images using FrameSet extracted information; add method to detect if AttributeList isEnhanced so as not to convert these; factor out test methods for SetOfFrameSets processing of paths and files to re-use as utility methods; add accessor methods to FrameSet to get sets of distinguishing, shared and (common) per-frame tags
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/SetWithEnhancedImages.java
---------------------
2012/03/26
add more functional group sequence extraction; consider possibility that functional group will have some attributes shared and some per-frame and hence make them per-frame, and also consider distinguished attributes as shared since may be in fucntional groups not top level, and hence exclude from top level copying; add pixel data copying using in memory buffer for now; create meta information, new UIDs, new SpecificCharacterSet, and write files
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SetWithEnhancedImages.java
---------------------
2012/03/27
update DICOM dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TagFromName.java
---------------------
2012/04/04
Add missing Device Observer UID (added in CP 1065) in X-Ray Dose template (000653)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2012/04/04
Tidy up javadoc and debugging messages prior to release
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/04/04
factor out tests from main method to Junit tests and add a constructor to produce Type 3 UUID hash-based deterministic OIDs (000654)
com/pixelmed/test/Makefile
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2012/04/04
Add support for Device Observer UID in classes and tests and use a deterministic synthetic UID in the RDSR generation from OCR, etc. (000655)
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestDeviceParticipant.java
---------------------
2012/04/04
Use a proper namespace UUID when creating a Type 3 hash based UUID for an OID and define a namespace UUID for Device Observer UID
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2012/04/04
Fixed problem with every file getting a duplicate patient record when constructing DICOMDIR, a defect that was introduced by the fix for (000614), by parameterizing whether comparisons return equality only if the same class instance (for sort order) or not (for insertions); also added more tests to check for this, added an empty constructor and made some methods public to allow tests to get at them (000656)
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
---------------------
2012/04/08
Add more static methods to return information about whether transfer syntax UID is encapsulated or not
com/pixelmed/dicom/TransferSyntax.java
---------------------
2012/04/08
Return byte offset of where reading stopped (which is tracked internally but has not been exposed using public methods before), for use, for example, when one wants to know where the pixel data is in a file
com/pixelmed/dicom/AttributeList.java
---------------------
2012/04/08
Turn off debugging message
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/04/08
Make frame set related classes and methods public
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/SetOfFrameSets.java
---------------------
2012/04/08
Correct VR of (0014,3022) Sensor Name from DS to ST per ASTM E2699-11
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2012/04/08
Check VL is reasonable during read, and if it is not, throw a specific exception rather than failing with an out of memory exception (000657)
com/pixelmed/dicom/AttributeList.java
---------------------
2012/04/08
Give up if too many bad attributes, usually caused by non-DICOM input causing out of memory exceptions with a VL that is within a plausible range but sill excessive (000657)
com/pixelmed/dicom/AttributeList.java
---------------------
2012/04/11
Fix (000658) TID 1020 Person Participant is not mandatory in Dose Check Details TID 10015
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2012/04/17
Add CP 1064 float and rational numerator and denominator in SR numeric content items
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/Makefile
---------------------
2012/04/17
Add CP 1064 float and rational numerator and denominator in SR numeric content items
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/Makefile
---------------------
2012/04/18
Use specific divide by zero rather than NaN qualifier in numeric content item
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
---------------------
2012/05/07
make derived database columns protected rather than package private so that can be accessed from sub-classes outside package
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2012/05/07
make getTableNameForInformationEntity() method public rather than package private so that can be accessed from sub-classes outside package
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2012/05/08
add known safe GE MR attributes required for NeuroQuant gradient correction
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
---------------------
2012/05/08
remove redundant removal of issuers
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2012/05/08
add test methods for removal of identifying attributes
com/pixelmed/test/Makefile
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
---------------------
2012/05/08
tidy up javadoc
com/pixelmed/dicom/AttributeList.java
---------------------
2012/05/08
correct icon for DoseUtility.app
Makefile
---------------------
2012/05/11
Add change reason for resolving lesion inconsistency caused by supplemental read
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2012/06/06
correct supplemental read code
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2012/06/07
Do not attempt to shutdown storageSOPClassSCPDispatcher during configuration dialog if null, which may occur if networkApplicationProperties threw exception during construction (000659)
com/pixelmed/display/DicomCleaner.java
---------------------
2012/06/08
update multi-frame dimensions as per Sup 43
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2012/06/12
Add check that DimensionIndexValues and InStackPositionNumber are not zero
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2012/06/12
Restrict characters permitted in local name, especially spaces, so as not to create corrupt preferences file (000660)
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
---------------------
2012/06/26
add utility class to calculate DICOM age string between two dates
com/pixelmed/test/Makefile
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/Makefile
---------------------
2012/06/27
Add date-derived PatientAge if absent and keep patient characteristics
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
---------------------
2012/06/28
make sure date-related conversions for age between calculations are not lenient and reject invalidly format dates with an exception
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/utils/DateUtilities.java
---------------------
2012/06/28
test leap year handling in age calculations
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/utils/DateUtilities.java
---------------------
2012/06/28
Add NQ result safe private tags
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
---------------------
2012/07/02
Move main method of color palette classes from base class to sub-classes in order to construct the correct palette; store the resulting palette instances in a non-temporary location for uploading to NEMA
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/Makefile
---------------------
2012/07/03
Add PMOD private MF SOP Class
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2012/07/06
Add DICOS v02 elements and SOP Class UIDs
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2012/07/25
add float access methods similar to double access methods, since the latter do not work for FL as opposed to FD (000667)
com/pixelmed/dicom/Attribute.java
---------------------
2012/07/31
Update Windows JRE from 6u18 to 6u33
windows/Makefile
windows/jre-6u18-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip(DEAD)
windows/jre-6u33-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip
---------------------
2012/07/31
Update to hsqldb 2.2.8
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/server/testserver.properties
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WebServerApplicationProperties.java
lib/additional/hsqldb.jar
---------------------
2012/07/31
Set web server debugging off; note that a bunch of web server experimental changes were checked in previously under the message updating hsqldb (which was updated, but has nothing to do with the web server changes)
com/pixelmed/server/testserver.properties
---------------------
2012/08/05
Supress exception on broken pipe when web browser scrolled past requested frame
com/pixelmed/web/WadoRequestHandler.java
---------------------
2012/08/05
Remove slider experiment in Javascript viewer since does not work on mobile, tidy up text related to left mouse function, add comments about BIR mouse direction compliance, and start at middle not first slice of series
com/pixelmed/web/ImageDisplayTemplate.tpl
com/pixelmed/web/stylesheet.css
---------------------
2012/08/05
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2012/08/10
Include a delimited string value for SequenceAttributes in addition to ordinary (scalar) attributes, in order to allow simple comparison of values (e.g., for finding shared attributes in frame sets
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
---------------------
2012/08/10
Add some rudimentary Java Date parsing capability to DateTimeAttribute, to help with comparing earlier or later dates
com/pixelmed/dicom/DateTimeAttribute.java
---------------------
2012/08/10
More work on creating frame sets and converting to legacy enhanced, including a private experimental Sup 157 storage SOP Class; also check if CT otherwise make multi-frame SR depending on Photometric Interpretation
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SetWithEnhancedImages.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2012/08/11
Tidy up javadoc related to framesets and making enhanced images, make more methods static or public, and fall back to RawData object if no suitable MFSC fallback
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/SetWithEnhancedImages.java
---------------------
2012/08/11
Rename SetWithEnhancedImages to MultiFrameImageFactory
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/SetWithEnhancedImages.java(DEAD)
---------------------
2012/08/11
Elaborate on distinguishing attributes in javadoc and make getAttributeTagsInMapWithValues() public since static and may be useful
com/pixelmed/dicom/FrameSet.java
---------------------
2012/08/11
Tidy up javadoc
com/pixelmed/apps/MergeCompositeContext.java
---------------------
2012/08/11
Tidy up javadoc
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2012/08/11
Start work on updating references to converted multiframe instances by tracking correspondence of old to converted, and finding all references in any instance
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2012/08/11
Factor out multiframe pixel data class to allow use of static methods
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/MultiFramePixelData.java
---------------------
2012/08/11
Replace constructors in multi-frame factory with convertImages() methods, now that all methods are static
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2012/08/15
add adjudication choice reasons related to PET reads
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2012/08/20
Do not try to apply negative window widths; like zero, use as trigger to apply statistical defaults (000669)
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/08/29
Add a class to identify duplicate images based on having the same pixel data hash and constructing collections of their duplicate Study, Series, SOP Instance and Frame of Reference UIDs
com/pixelmed/apps/Makefile
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/utils/FileUtilities.java
---------------------
2012/08/30
Add CPs 1137, 1138 and 1204 to dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2012/09/03
fix type in comment
com/pixelmed/server/testserver.properties
---------------------
2012/09/03
Modify verification class so that constructor fails not only if no connection or association, but also if status is failure, making it more useful as a utility class
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2012/09/03
Make canConnectToPort public and make a variant of it that permits control of connection timeout
com/pixelmed/network/ProbeCapability.java
---------------------
2012/09/03
Add methods to get address of endpoints (and make base class and these methods abstract)
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2012/09/03
If the C-MOVE destination is not recognized, and it matches the Calling AE, probe some common ports to see if a connection and a successful C-ECHO can be performed, and if so move to that port on the caller
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2012/09/03
Add experimental app to download DICOM instances and save to local file system, or transmit elsewhere via DICOM, ftp, etc.
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/Makefile
---------------------
2012/09/03
Quieten canConnectToPort()
com/pixelmed/network/ProbeCapability.java
---------------------
2012/09/03
Push all network debugging levels down one level of detail so that level 1 is simple connection and transfer information only
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2012/09/03
Add timestamp to network debugging entries for better logging
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2012/09/04
Detect when no transfer syntax in C-GET, rather than allowing to fall through to NullPointerException during write (000670)
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2012/09/04
Prevent C-FIND from failing when an SQ is present in the request identifier (000671); also add debugging level switch to query response generator
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/network/FindSOPClassSCU.java
---------------------
2012/09/06
add utility to remap UIDs
com/pixelmed/apps/Makefile
com/pixelmed/apps/RemapUIDs.java
---------------------
2012/09/07
Close database properly at end of rebuild to make sure everything is persisted (000672)
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
---------------------
2012/09/07
Add utility to delete database records and associated (copied) files (000673)
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/Makefile
---------------------
2012/09/07
tidy up parameter name in Javadoc
com/pixelmed/dicom/InformationEntity.java
---------------------
2012/09/07
Add more logging
com/pixelmed/apps/MergeCompositeContext.java
---------------------
2012/09/07
Close database properly at end of delete to make sure everything is persisted (000672)
com/pixelmed/database/DeleteFromDatabase.java
---------------------
2012/09/08
When matching pixel data to detect duplicate UIDs and remapping UIDs, list them in order encountered and deem the first set to be the canonical ones to which later alternatives are remapped, to give the user control of which set is which by the ordering the input files on the command line; also elide SOP Classes, Transfer Syntaxes, etc. during remapping
com/pixelmed/apps/Makefile
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/database/Makefile
com/pixelmed/dicom/SOPClass.java
---------------------
2012/09/08
Factor out findAllNestedReferencedSOPInstanceUIDs() method from MergeCompositeContext and put in AttributeList as general utility method; activate more logging in MergeCompositeContext and update tests to account for hierarchical folders for output files
com/pixelmed/apps/Makefile
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/dicom/AttributeList.java
---------------------
2012/09/08
Add a utility application to copy only head SR (those without successors in PredecessorDocumentsSequence) and their referenced files
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/Makefile
---------------------
2012/09/08
Add a utility to check that all referenced SOP Instance UIDs in a set of files resolve (i.e., no files are missing)
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/Makefile
---------------------
2012/09/08
Add utility to build evidence sequence for structured reports from set of SRs and referenced files
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/Makefile
---------------------
2012/09/10
Correct swapped row and column offset in pixel data tags for whole slide imaging (incorrectly incorporated Sup 145)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2012/09/11
Add IVOCT SOP Classes per Sup 151
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2012/09/19
Add jai-imageio JNLP and index.html files to repository, which for some reason were not added before
webstart/download.java.net/media/jai-imageio/webstart/early-access/index.html
webstart/download.java.net/media/jai-imageio/webstart/early-access/jai-imageio-1.1-latest.jnlp
webstart/download.java.net/media/jai-imageio/webstart/early-access/jai-imageio-1.1.jnlp
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/index.html
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/linux-i586/index.html
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-i586/index.html
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/solaris-sparc/index.html
webstart/download.java.net/media/jai-imageio/webstart/early-access/1.1/windows-i586/index.html
---------------------
2012/09/20
Add support for experimental (non-standard) Other Double (OD) value representation
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2012/09/20
test make multiframe in DCE-MR images
com/pixelmed/dicom/Makefile
---------------------
2012/09/20
Add preliminary support for creating display source images from OF and OD pixel data, and resampling and windowing float data, and returning minim, maximum and stored pixel values for SUV and RWV calcaulations from floating point rather than just integer values
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2012/09/20
Add application to scale floating point (OF or OD) pixel data to 16 bit integer (OW) values
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/Makefile
---------------------
2012/09/20
Add preliminary (primitive, incomplete) convertors from NIfTI and NRRD to DICOM
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
---------------------
2012/09/20
correct extraction of separate spatial and temporal units
com/pixelmed/convert/NIfTI1Header.java
---------------------
2012/09/20
add conversion of FLOAT64 using OD
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2012/09/21
add method to get AttributeList of numbered item within Sequence
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2012/09/21
Add a PrivatePixelMedLegacyFloatingPointImageStorage SOP Class
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2012/09/21
Use PrivatePixelMedLegacyFloatingPointImageStorage SOP Class for floating point integer conversions, and clean up SC grayscale attributes including Modality and PresentationLUTShape
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
---------------------
2012/09/21
Add per-frame and shared functional group sequences for the geometry for NIfTI and NRRD conversions, clean up various other attributes during conversion, use private floating point SOP Class is floating point
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
---------------------
2012/09/23
Correct an integer truncation defect in floating point and double data buffer resampling
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2012/09/23
adding OD attribute class
com/pixelmed/dicom/OtherDoubleAttribute.java
---------------------
2012/09/23
Add support for exact rather than DICOM algorithm window calculation to handle small floating point values (esp. less than 1.0), and add choice of acceleration factors to increase or decrease acceleration o windowing when holding down the shift key, again foro small floating point numbers
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/event/Makefile
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
---------------------
2012/09/23
Turn off debugging message
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/09/28
tidy up javadoc
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
---------------------
2012/09/28
Improve parsing and formatting of date time strings, including support of all legal DICOM DT variants, correct handling of milliseconds and timezones, specification of timezone explicitly during formatting rather than relying on current device default
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
---------------------
2012/09/28
Add a convenience mathod for frequently used pattern of adding contributing equipment sequence using current date formatted in default time zone, and use it throughout
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/dose/CTDose.java
---------------------
2012/09/28
For computing SUV, add method to use scan date time derived from HalfLife, AcquisitionDateTime, FrameReferenceTime and ActualFrameDuration, and use it when SeriesTime unavailable or suspicious and no alternative private attributes; also take care to account for presence of time zone information consistently for all real world dates and times
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/test/TestSUVTransformValues.java
---------------------
2012/09/29
Add support for Acquisition Protocol in RDSR and report derived from Protocol Name in slices
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
---------------------
2012/09/29
Populate comments at irradiation event level with series description value extracted from slices
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
---------------------
2012/10/05
Add per-frame drawing shapes
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/10/05
Turn off debugging messages
com/pixelmed/display/SuperimposedDicomImage.java
---------------------
2012/10/05
Rearrange ImageToDicom test
com/pixelmed/dicom/Makefile
---------------------
2012/10/05
Add support for converting multiframe images, not just single frame images, to consumer formats, and add tests for output formats for 8 bit converted result other than JPEG, including BMP, GIF, PNG, PNM, TIF and JPEG 2000
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
---------------------
2012/10/05
Add control over whether annotations rendered onto consumer format images are color or not, and use color for web server
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/web/WadoRequestHandler.java
---------------------
2012/10/05
Handle color DICOM images when converting to consumer format even without explicitly requested color annotations using platform's most favorable image type
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
---------------------
2012/10/05
tidy up debugging messages
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2012/10/06
When cannot or do not need to convert to most favorable, return original, not null
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2012/10/06
Add superimposed image and per frame drawing shapes to ConsumerFormatImageMaker, and correct null pointer exception if not drawing demographic annotations and add tests for both, including main method extension for SuperimposedDicomImage that writes to consumer format file rather than displaying interactively
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SuperimposedDicomImage.java
---------------------
2012/10/06
Add region and frame range selection to ConsumerImageFormatMaker
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
---------------------
2012/10/21
Add non-hierarchical image and SOP Instance reference classes, for use as objects in maps, etc.
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPInstanceReference.java
---------------------
2012/10/21
return list of converted files
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2012/10/21
Add a convertImages method that takes an array of files
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2012/10/21
Restore constructor for superimposed images but without region selection
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2012/10/23
In selective match model, avoid images with traling caret delimiter in patient name splitting single study into one study per image (000675)
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
---------------------
2012/10/23
Add test case to convert Talairach NIfTI file to DICOM
com/pixelmed/convert/Makefile
---------------------
2012/10/23
Turn off debuggin messages
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2012/10/26
OphthalmicTomographyImageStorage is enhanced family; extend demographics annotations to detect larger number of enhanced family objects that use plane position, orientation and pixel measures functional group macros
com/pixelmed/dicom/SOPClass.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2012/10/29
Update javadoc to warn about aspect ratio of output image and selected sub-region needing to be the same to prevenet distortion
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2012/11/03
add experimental code values for cross-sectional image library
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2012/11/05
codes for image library extensions and segmentation conversions
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2012/11/05
Update data element dictionary and SOP classes for Nov 2012 WG 6 FT, including optical surface scanners
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2012/11/08
Turn off debugging message
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/11/18
Add a utility method to create a new path that re-creates the relative path of the source file in the destination folder
com/pixelmed/utils/FileUtilities.java
---------------------
2012/11/18
More private codes for segmentation work
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2012/11/18
Add a utility application to replace Frame of Reference UIDs when not consistent within a series or study
com/pixelmed/apps/Makefile
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
---------------------
2012/11/21
Add utility to change TLHC offset
com/pixelmed/apps/Makefile
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2012/11/21
Add control over superimposed closest slice required tolerance
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/SuperimposedImage.java
---------------------
2012/11/21
Add control over superimposed closest slice required tolerance
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2012/11/23
Add public DICOM storage SCPs by default from resource file if no remote AEs configured when initializing network properties
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/publicstoragescps.properties
---------------------
2012/11/23
Tidy up javadoc
com/pixelmed/display/SingleImagePanel.java
---------------------
2012/11/23
Comment out experimental addition to toString() method of Distance of TLHC from Origin along Normal, since upsets some tests that expect specific results from this method
com/pixelmed/geometry/GeometryOfSlice.java
---------------------
2012/11/30
Tidy up javadoc
com/pixelmed/doseocr/ExposureDoseSequence.java
---------------------
2012/12/01
Tidy up javadoc
com/pixelmed/apps/ConvertPlanarConfiguration.java
---------------------
2012/12/01
Report number of samples per pixel in unsupported image format exception
com/pixelmed/display/SourceImage.java
---------------------
2012/12/08
Add utility to copy DICOM image retaining only minimal attributes to describe pixel data
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/Makefile
---------------------
2012/12/08
Add bone age read type
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2012/12/09
Improvements to extraction and display of images and coordinates from SR, including detecting and supressing display of image library only images, keeping coordinates in sync when referenced images missing in collection supplied to browser, making cross-hairs and text annotation offset smaller, supressing some unhelpful parent concepts in extracted accompanying text annotation, and handline ellipses whose width and height are negative if coordinates are not swapped
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/display/DicomBrowser.java
---------------------
2012/12/15
Add conversion from multiple raw RGB files (such as for visible human) to multiframe DICOM SC, and add a few utility classes for file name filtering and creating OB attributes that gather pixel data values from multiple files
com/pixelmed/convert/Makefile
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/Makefile
---------------------
2012/12/15
Handle gzip compressed input files when converting raw RGB to multiframe DICOM
com/pixelmed/convert/Makefile
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
---------------------
2012/12/30
Update copyright notice for 2013
COPYRIGHT
---------------------
2013/01/01
Include both CUI and SNOMED Concept ID in constructor for concepts, and add values from UMLS for CUI throughout
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
---------------------
2013/01/07
Fix DicomImageBlackout failing on Windows (only) with large enough file to be memory mapped, by copying to new file first and closing before renaming, and aggressively garbage collecting and finalized to hopefully release buffers (000676)
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
---------------------
2013/01/14
Tidy up javadoc
com/pixelmed/validate/ExecuteTranslet.java
---------------------
2013/01/14
Include anatomy test in all target
com/pixelmed/test/Makefile
---------------------
2013/01/14
Add entire DX View context group to projection view extraction (with corrected codes per CP for RAO and sagittal), and turn off debugging messages
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2013/01/19
Improve setting of background color in user interface on aqua and use UIManager to do it since JFrame.setBackground() does not propagate in Java 7 on Mac; leave other L&Fs alone; check for Windows platform in code in ApplicationFrame and always use native L&F rather than metal if so rather than depending on command line definition to set it; tidy up createGUI() related stuff in ApplicationFrame to use methods that are static when possible and make them public; remove unnecessary overrdiding of window closing in applications since already handled with shutdown hook; detect Java 7 on Mac and use FileDialog instead of JFileChooser which causes a deadlock (though correct fix would be to not call from a separate thread since Swing is not thread safe)
DicomCleanerAssumingJREInstalled.bat
DicomCleanerWithOwnJRE.bat
DicomImageBlackout.bat
DicomImageViewer.bat
DicomImageViewerWithCDJRE.bat
DicomImageViewerWithOwnJRE.bat
DoseUtilityAssumingJREInstalled.bat
DoseUtilityWithOwnJRE.bat
ECGViewer.bat
ECGViewerWithCDJRE.bat
MammoImageViewer.bat
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2013/01/19
detect Java 7 on Mac and use FileDialog instead of JFileChooser which causes a deadlock (though correct fix would be to not call from a separate thread since Swing is not thread safe); also provide methed to get directory path that was last used, to help users of this class revisit same directory next time
com/pixelmed/dicom/MediaImporter.java
---------------------
2013/01/19
Add Image Library classes
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
---------------------
2013/01/19
Factor out JRE target for javac options into parameter
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/dose/Makefile
com/pixelmed/doseocr/Makefile
com/pixelmed/geometry/Makefile
com/pixelmed/test/Makefile
com/pixelmed/validate/Makefile
---------------------
2013/01/19
Solve problem of deadlock on non-Swing thread with JFileChooser in DicomCleaner simply by doing the file choosing on the main thread, not dfelegating it to MediaImporter
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/display/DicomCleaner.java
---------------------
2013/01/20
Work on making applications and classes that use Swing properly thread safe with respect to using Event Dispatcher Thread for file dialogs, loggers, progress bar updates, using DicomCleaner and MediaImporter as first candidates; also add progress bar support to retrieval in DicomCleaner by making a RetrieveWorker (else progress bar never updates); clean up all progress bars when work is complete (show as blank not 100%)
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/Makefile
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/ThreadUtilities.java
---------------------
2013/01/20
Factor out JRE target for javac options into parameter
Makefile.common.mk
---------------------
2013/01/20
Switch to fgrep since MacOS 10.8 whines about repitition operator when making change log
Makefile
---------------------
2013/01/20
Add Swing thread safe cursor change and use it in DicomCleaner
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/Makefile
com/pixelmed/display/SafeCursorChanger.java
---------------------
2013/01/20
Use Swing thread safe cursor in DicomImageBlackout
com/pixelmed/display/DicomImageBlackout.java
---------------------
2013/01/21
Missed one place where SafeFileChooser should be used instead of JFileChooser to check which thread it is invoked on
com/pixelmed/display/DicomCleaner.java
---------------------
2013/01/21
Use thread safe update of progress bar; add a default connect timeout, since apache default is none
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
---------------------
2013/01/21
Make DicomCleaner Swing thread safe
com/pixelmed/apps/DoseUtility.java
---------------------
2013/01/21
Set default security type to NONE else throws null pointer exceetion if user chooses nothing during configuration for FTP client
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
---------------------
2013/01/21
Do NOT exit in WindowClosing, since may not be the only ApplicationFrame (incorrectly reactivated in recent refactoring and clean up for Java 7)
com/pixelmed/display/ApplicationFrame.java
---------------------
2013/01/21
Use message logger and progress bar in send
com/pixelmed/display/DicomCleaner.java
---------------------
2013/01/21
Make DownloadOrTransmit swing thread safe, and use DicomCleaner retrieve worker pattern rather than DoseUtility pattern since it supports retrieval of everything
com/pixelmed/apps/DownloadOrTransmit.java
---------------------
2013/01/21
Make DownloadOrTransmit swing thread safe, and use DicomCleaner retrieve worker pattern rather than DoseUtility pattern since it supports retrieval of everything
com/pixelmed/apps/DownloadOrTransmit.java
---------------------
2013/01/22
Make DicomImageViewer swing thread safe
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SafeFileChooser.java
---------------------
2013/01/22
Make DialogMessageLogger Swing EDT thread safe
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomCleaner.java
---------------------
2013/01/23
Add more support for constructing and parsing referenced content items including roundtrip XML and test, by refactoring ContentItem class into separate abstract by-value and by-reference sub-classes
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
---------------------
2013/01/24
Correct code for outline in test
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
---------------------
2013/01/24
Make image library entry internal classes public, add get/set for laterality and add a utility class to anatproc to convert generic laterality codes to mammography CAD specific codes
com/pixelmed/anatproc/Makefile
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestLaterality.java
---------------------
2013/01/25
Implement multi-select for database browser and applications that use it
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageViewer.java
---------------------
2013/01/26
Extend use of memory mapped buffers for SourceImage to color images; factor out commonality in large attributes on disk; add conventional getXXXValues() methods to large attributes on disk in case AttributeFactory makes them but caller does not know to memory map them; lower threshold for leaving on disk (? temporarily for testing or a good idea in the long term ?)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2013/01/26
Update experimental cleaner html to use more recent Oracle-recommended install java mechanism; point to recent build
webstart/DicomCleanerExperimental.html
webstart/DicomCleanerExperimental.jnlp
webstart/icons/DicomCleaner.png
---------------------
2013/01/26
Restore cursor during blackout if exception (e.g., out of memory)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2013/01/26
Make GeometryOfVolume concrete rather than abstract and provided constructor from an array of GeometryOfSlice
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2013/01/26
Tidy up javadoc and turn off some debugging messages
Makefile
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/display/SourceImage.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoServer.java
---------------------
2013/01/30
Prevent null child in query tree derailing rest of retrieval request
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2013/01/30
Modify decision to apply YBR inverse transform based on whether pixel data was decompressed, and whether or not decompressed photometric interpretation is still YBR; involves factoring out decisions made during AttributeList reading, and setting flag in SourceImage accordingly
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/SourceImage.java
---------------------
2013/01/30
Cache host name lookup for duration of association, just in case is slow to lookup and times out; alleviates but does not entirely fix (000677)
com/pixelmed/network/Association.java
---------------------
2013/02/01
Add javadoc
com/pixelmed/dicom/CompositeInstanceContext.java
---------------------
2013/02/01
add missing ident strings
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
com/pixelmed/anatproc/Combination.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/Makefile
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/ThreadUtilities.java
---------------------
2013/02/03
Use generic SOPClass detection of enhanced multi-frame image (or not) when parameterizing demographic and technique annotations for display, rather than checking for specific SOP Classes manually (allows Frame Laterality detection to work, for say, mammo tomo images)
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2013/02/03
Add view code sequence and slice progression direction for cardiac views (CP 739)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/02/05
Add not applicable option for time point observations that may be made redundant if retrospective change to baseline observation, with corresponding change reason
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/02/08
Handle illegal zero byte and pair of hyphen explicit VR, and incorrect short form of VL when long form expected (based on reserved bytes not being zero)
com/pixelmed/dicom/AttributeList.java
---------------------
2013/02/09
tidy up javadoc and indentation
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
---------------------
2013/02/09
Deal with invalid dates and times causing failure of database insertion due to derived datetime stamps (000679)
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
---------------------
2013/02/09
Update data dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/02/09
Restore maximumInMemoryOtherDataValueLength to previous large value
com/pixelmed/dicom/AttributeFactory.java
---------------------
2013/02/12
Add private legacy MR and PET SOP Classes
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2013/02/12
Correct check for rescale attributes for pixel value transformation sequence
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2013/02/12
com/pixelmed/dicom/AttributeTag.java
---------------------
2013/02/12
Add PET test case for multiframe factory
com/pixelmed/dicom/Makefile
---------------------
2013/02/12
Make excludeFromCopyingIntoTopLevel initializer static, else not executed in time for its use (manifests as SliceThickness, etc., getting copied to top level dataset
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2013/02/15
When making enhanced multiframe images, do not just copy distinguishing attributes (selectively), but explicitly handle Image Pixel Module and others, choose earliest ContentDate and Time (including handling timezone correctly for this and AcquisitionDateTime, with a new static method and some tests), and replace InstanceCreationDate and Time
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
---------------------
2013/02/17
When reading raw source image, correctly handle largest gray with respect to image min and max extractuion, otherwise default window is incorrect
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2013/02/17
Add some more convenience methods for extractuing named attributes from with selected items of sequences, in addition to existing methods for just first item
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2013/02/17
Moving debugging mesdsages prior to arraycopy in case it throws exception
com/pixelmed/dicom/MultiFramePixelData.java
---------------------
2013/02/17
Improved timezone handling in multiframe image factory, with unit tests; also factored out separate factory method to build from and return AttributeLists rather than files, to simplify testing but probably generally useful; make factory methods public; also clean up DateTimeAttribute epoch and formattedf string methods to handle missing date by throwing an exception rather than returning garbage
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
---------------------
2013/02/20
Add SCOORD3D content item and Comprehensive 3D SR (Sup 162) and unit tests for creation of content item and round-trip xml
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/02/20
Add SCOORD3D content item and Comprehensive 3D SR (Sup 162) and unit tests for creation of content item and round-trip xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/02/20
Do file choosing on EDT for ECG viewer
com/pixelmed/displaywave/ECGViewer.java
---------------------
2013/02/20
Add more control over whether or not to exit the application when user closes the frame, and restore exit as the default (inadvertently removed when adding windowClosing() method to ApplicationFrame recently
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/TestAppMultiFrameCompare.java
---------------------
2013/02/20
New experimental webstart version
webstart/DicomCleanerExperimental.jnlp
---------------------
2013/02/20
Use JFrame.setDefaultCloseOperation() to control window closing exit when possible rather than always setting a windowClosing WindowListener, and use its int argument in ApplicationFrame() constructors instead of a boolean exitApplicationOnClose; i.e., don't reinvent the wheel; cannot do this for JDialog sub-classes though, since EXIT_ON_CLOSE is not an option for that class
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
---------------------
2013/02/20
Factor out and generalize SafeFileChooserThread and use in ConvertAmicasJPEG2000FilesetToDicom
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/displaywave/ECGViewer.java
---------------------
2013/02/20
Exit conversion application when log window is closed
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
---------------------
2013/02/20
Bring back logging message with file name in StorageSOPClassSCPDispatcher.DefaultReceivedObjectHandler.sendReceivedObjectIndication() otherwise automated test for WatchFolderAndSend fails
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2013/02/20
Add fileSelectionMode parameter to SafeFileChooserThread and use it in WatchFolderAndSend and ConvertAmicasJPEG2000FilesetToDicom
com/pixelmed/apps/Makefile
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/display/SafeFileChooser.java
---------------------
2013/02/20
Use SafeFileChooserThread in DicomBrowser with no arguments
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/Makefile
---------------------
2013/02/20
Use SafeFileChooserThread in DicomImageBlackout with no arguments
com/pixelmed/display/DicomImageBlackout.java
---------------------
2013/02/20
Handle status change events that are not received on EDT
com/pixelmed/display/StatusBarManager.java
---------------------
2013/02/22
Add modify dates capability for deidentification
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
webstart/DicomCleanerExperimental.jnlp
---------------------
2013/02/22
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2013/02/22
During date modification, handle time attributes like RadiopharmaceuticalStartTime that do not have a date sibling by using another date value, and make sure that they are found during search for earliest to avoid midnight crossing if a later datetime is moved to the epoch, which is always 0000 hours; otherwise PET SUV calculations, for example, will be wrong
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/03/05
turn off debugging messages related to memory mapped buffers
com/pixelmed/display/SourceImage.java
---------------------
2013/03/06
Debug failing database insert object
com/pixelmed/database/DatabaseInformationModel.java
webstart/DicomCleanerExperimental.jnlp
---------------------
2013/03/07
Modify dates even if corresponding time attribute is absent by assuming 000000
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/03/07
Ignore ridiculous dates when finding earliest
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/03/07
Add separate pane for modify dates, with year handling options including earliest, random and default
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2013/03/07
update experimental cleaner
webstart/DicomCleanerExperimental.jnlp
---------------------
2013/03/11
Detect private safe SQ that are EVRLE UN fixed length and treat as SQ to prevent entire sequence being treated as safe rather than checking its contents, since otherwise it would need to be removed entirely (affects Hologic Marker Sequence)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/03/16
Turn off database insertion SQL statement dump
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2013/03/16
Turn off SR XML template debugging identification messages
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2013/03/16
Improve handling of large array writes by buffering in chunks for both byte and short writes
com/pixelmed/dicom/BinaryOutputStream.java
---------------------
2013/03/16
Add file copy utility that decompresses if compressed
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2013/03/16
Use dummy value not removal of DeviceSerialNumber, since Type 1 in Enhanced General Equipment Module
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
---------------------
2013/03/23
Experiment with building breast tomo objects from single frame MG, including calculation of position and orientation from tomo angle and height and extraction of anatomy
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2013/03/23
Add option to keep (acquisition) protocol name during de-identification
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2013/03/25
Correct code meaning that was longer than 64 chars
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/01
Do not include in earliest date search those attributes not related to patient events, such as detector calibration
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/04/07
Add DownloadOrTransmit to webstart
Makefile
icons/DownloadOrTransmit.icns
icons/DownloadOrTransmit.ico
icons/DownloadOrTransmit.png
webstart/DownloadOrTransmit.html
webstart/DownloadOrTransmit.jnlp
---------------------
2013/04/08
tidy up comments
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2013/04/08
Update notes related to anatomic codes used in de-identification
com/pixelmed/anatproc/NOTES
---------------------
2013/04/08
Update DICOM data dictionary include WSI IE changes and CP 1246 Autosequence Flag
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/04/09
Tidy up javadoc
com/pixelmed/apps/ConvertNonRGBToRGB.java
---------------------
2013/04/09
Add utility to convert 8 to 16 bit image
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/Makefile
---------------------
2013/04/15
allow attributes with VL > maximumShortVRValueLength for histograms (000683)
com/pixelmed/dicom/AttributeList.java
---------------------
2013/04/20
Update projection x-ray dose report templates, including CP 1077
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/20
Add reconstruction algorithm (CP 1232)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/20
Add AAPM 204 Size-Specific Dose Estimates to CT RDSR (CP 1170) and also fix condition on effective dose conversion factor
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/20
Report error in projection X-Ray RDSR if obsolete Exposure Time code is used
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/21
Update DicomCleaner webstart documentation to include date handling, protocol name and Windows 7 screenshots
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanel.png
webstart/images/DicomCleanerControlPanelDates.png
webstart/images/DicomCleanerControlPanelPassThru.png
webstart/images/DicomCleanerMainPanelAfterClean.png
webstart/images/DicomCleanerShowVersion.png
webstart/images/DicomImageBlackoutColorUltrasound.png
---------------------
2013/04/21
Add matchRelationship parameter when checking content item, to allow for TID 14xx mutually exclusive R- and SELECTED FROM relationships with same type; helps with TID 2000
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/21
Factor our TID 2002
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/21
Improve multiple inclusion of TID 1400
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/22
Populate CID 4009 DX Anatomy Imaged by copying icluded 4031 in place
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2013/04/22
correct condition on device observer, make device role in procedure mandatory
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/22
Add check for IFF inclusion of templates and report content items included when template condition not satisfied
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/04/26
Throw exception on failure status for C-FIND, C-GET and C-MOVE, just like C-ECHO
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/VerificationSOPClassSCU.java
---------------------
2013/04/28
Use JIIO rather than native com.sun JPEG writer for screenshots (000684) (Debian 678383)
com/pixelmed/display/ApplicationFrame.java
---------------------
2013/04/28
add more shell scripts for applications
DicomSRValidator.sh
StructuredReportBrowser.sh
---------------------
2013/06/08
add revised eddy current data elements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/06/08
Add DICONDE Eddy Current SOP Classes
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2013/06/14
Use Sup 157 data elements and SOP Classes
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/06/15
CP 1248, 1258, 1269 data elements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/06/19
Handle distance measurements for non-square pixels on 3D images
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
---------------------
2013/06/25
Used final text assigned DCM code for conversion equipment
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2013/06/26
Use Sup 157 data elements and SOP Classes
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
---------------------
2013/07/03
Add QualityControlSubject to CompositeInstanceContext (CP 1123)
com/pixelmed/dicom/CompositeInstanceContext.java
---------------------
2013/07/03
Add Quality Control Intent (CP 1123)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2013/07/05
Remove mbpo on Number of Pulses per CP 1151 after CP 1077
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/07/13
Check in Association Initiator that Transfer Syntax returned by Acceptor is one that was offered in Presentation Context (000689)
com/pixelmed/network/AssociateRequestAcceptPDU.java
---------------------
2013/07/18
Exclude favicon.ill from release package, since contains embedded Adobe Illustrator copyright statements, and isn't necessary
Makefile
com/pixelmed/web/favicon.svg
---------------------
2013/07/24
Add command line options to validator to control describe and case matching
com/pixelmed/validate/DicomSRValidator.java
---------------------
2013/07/24
Factor out commonality of TID 10004 and 10007 so as not to generate spurious errors on common content (per proposed cp_dac226_RefactorRDSRAccumulated)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/07/24
Do not check included templates when parent template condition (if any) is not satisfied; still probably not strictly correct, since if parent template is optional and included template is mandatory, how is one to know that the parent has actually been included?
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2013/07/24
Do not quote arguments to shell script, since now have more than one argument possible, since adding validator options for describe and match case
DicomSRValidator.sh
---------------------
2013/08/15
Add STOW attributes (Sup 163)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/08/19
Use standard codes for image library (CP 1266)
com/pixelmed/dicom/CrossSectionalImageLibrary.java
---------------------
2013/08/19
Continue to look for proprietary codes as well as standard codes for image library (CP 1266)
com/pixelmed/dicom/CrossSectionalImageLibrary.java
---------------------
2013/08/23
Add method to find min and max in float array
com/pixelmed/dicom/ArrayCopyUtilities.java
---------------------
2013/08/23
retain IIOMetadata during compressed pixel data read in case needed later, and remove unused IIO read progress lisetner
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
---------------------
2013/09/08
Add mouse wheel event for scrolling through frames (to support Mighty Mouse)
com/pixelmed/display/SingleImagePanel.java
---------------------
2013/09/09
Add convenience method to get array of string values from named attribute within items of named sequence attribute in list
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
---------------------
2013/09/09
Add UTF8 encoding parameter when making javadoc, else Java 8 EA fails
Makefile
---------------------
2013/09/09
Cleanup some funky characters in comments that upset javadoc in Java 8 EA
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
---------------------
2013/09/09
Tidy up javadoc
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StringAttribute.java
---------------------
2013/09/11
Add suitable SpecificCharacterSet when making DICOM from XML Structured Report with non-default character strings
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
---------------------
2013/09/18
Add utility to unencapsulate compressed bit stream for multiple frames, with supporting to changes to AttributeList reader and new attribute class
com/pixelmed/convert/Makefile
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2013/09/19
Add utility to unencapsulate compressed bit stream for multiple frames, with supporting to changes to AttributeList reader and new attribute class
com/pixelmed/convert/EncapsulateCompressedPixelData.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
---------------------
2013/09/19
Add trial retired Sup 23 SOP Classes
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2013/09/23
Add utility to unencapsulate compressed bit stream for multiple frames, with supporting to changes to AttributeList reader and new attribute class
com/pixelmed/convert/Makefile
---------------------
2013/09/23
Add utility to converted indexed label map (such as from SPL brain atlas) to DICOM segmentation object
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
---------------------
2013/09/23
Add standard background as part of adding unrecognized label
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/23
Add color and CIELab conversion
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
---------------------
2013/09/24
Populate PixelData with bit values and add per-frame functional groups including copied position, and referenced segment number
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/24
Add more mandatory IOD attributes, including control of content descriptors from command line, and hokey population of serial number and software versions
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/24
Add segment and position dimensions
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/24
Add ident string
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/24
Add new series and instance UIDs, other series attributes, and dates and times
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/24
Test manually specifying series attributes
com/pixelmed/convert/Makefile
---------------------
2013/09/25
Add derivation image functional group macro and common instance reference module, clean up to also support 2012/2013 atlas, including side for unrecognized codes, and code meanings that are too long
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
com/pixelmed/server/testserver.properties
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
com/pixelmed/web/InstanceListRequestHandler.java
---------------------
2013/09/25
Undo bad commit
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
com/pixelmed/server/testserver.properties
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
com/pixelmed/web/InstanceListRequestHandler.java
---------------------
2013/09/25
Distinguish missing label information from label information without code in warnings
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/25
Use Study and FoR attributes of reference image
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
---------------------
2013/09/26
Replace background label in supplied index map with standard label if no code supplied
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/26
Correct VR of replaced StudyDate and Time
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2013/09/26
Add segmentation conversion test cases for release 1.0 of 2013 brain atlas and HNCMA versions
com/pixelmed/convert/Makefile
---------------------
2013/09/26
Add skin segment test and select property categories using CUI lookup
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
---------------------
2013/09/26
Correct swapped sense of toFLOAT/toINT command line arguments to integer scaling and beef up testing
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
---------------------
2013/09/26
Integer scale grayscale file for 2012 HNCMA atlas
com/pixelmed/convert/Makefile
---------------------
2013/09/30
More attributes to deindetify (cp_dac235)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/09/30
More attributes to deindetify (cp_dac235)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2013/10/05
Factor out sRGB to/from CIELab PCS conversions and add utility class and round trip tests
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/Makefile
---------------------
2013/10/05
Add javadoc
com/pixelmed/utils/ColorUtilities.java
---------------------
2013/10/05
Add Lab integer scaling tests for ICC Table 14
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
---------------------
2013/10/14
Update names for private Philips SOP Classes
com/pixelmed/dicom/SOPClass.java
---------------------
2013/10/14
Add utility to unencapsulate compressed bit stream for multiple frames, with supporting to changes to AttributeList reader and new attribute class
com/pixelmed/dicom/Makefile
---------------------
2013/10/15
Add CornealTopographyMapStorage SOP Class (Sup 168)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2013/10/16
Improve lookup of 2D from 3D coordinates, using revised substitution method for slice and matrix inversion solution of linear equations for volume, and finding major components of each axis to prevent division by zero and support all orientations (was failing on sagittals)
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2013/10/16
Preliminary work on Mammo CAD templates (incomplete)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2013/10/16
Factor out WADO paramaters identifying instance
com/pixelmed/web/InstanceListRequestHandler.java
---------------------
2013/10/16
Check roundtrip use of 2D<->3D coordinate lookup of cursor location to monitor behavior of revised GeometryOfSlice lookup of coordinates
com/pixelmed/display/SingleImagePanel.java
---------------------
2013/10/16
Experiment with production of floating point DICOM pixel data from NIfTI
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2013/10/16
Extend superimposition to support multiple segments including application to subset of frames, handling os specified segment color and improved control of transparency
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
---------------------
2013/10/16
Add forgotten test app
com/pixelmed/display/TestAppMultiFile.java
---------------------
2013/10/16
Add support of ICC profile to SourceImage
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2013/10/16
Check geometry of slice exists before derferencing it for roundtrip check
com/pixelmed/display/SingleImagePanel.java
---------------------
2013/10/16
Experiment with extraction of ICC profile from consumer formats like JPEG - fails because JIIO codecs actually ignore the profile, do not apply it, and return a default sRGB profile instead, which isuseless
com/pixelmed/dicom/ImageToDicom.java
---------------------
2013/10/16
Set properties to instance list
com/pixelmed/server/testserver.properties
---------------------
2013/10/18
Update data dictionary, including CP 1268, Sup 168, DICONDE corrections
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/10/18
Correct condition on reference point code and text, which were swapped
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/10/18
Tidy up decoding of single bit images and overlays ... no impact on execution
com/pixelmed/dicom/Overlay.java
---------------------
2013/10/18
Use same iteration pattern for big endian as little endian ... no effect on behavior
com/pixelmed/dicom/BinaryInputStream.java
---------------------
2013/10/18
Always trust explicit OW for PixelData, else single bit images in big endian with explicit OW have wrong byte order
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/display/SourceImage.java
---------------------
2013/10/20
Make superimposed BufferedImage large enough to include row and column offset when a subregion to prevent clipping
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
---------------------
2013/11/20
Make Shared Functional Group Sequence Type 1 again per Type 1 SQ Empty Items in Functional Groups (CP 1274)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/11/20
Additional Items for Dose SR (by IEC PT 61910-1) (CP 1223)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2013/11/24
Add Private eRAD PracticeBuilder Report Text and Dictation SOP Classes
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2013/11/24
Update data dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/12/11
add some more utility methods and contructors for file sets
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/utils/FileUtilities.java
---------------------
2013/12/11
Tidy up some requirements and conditions on DerivationImageSequence and CTDIvol
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/12/11
Add another isPointInSlicePlane() method that takes array rather than Point
com/pixelmed/geometry/GeometryOfSlice.java
---------------------
2013/12/17
Handle zero length defined term specially, in that absence is equivalent to presence with an empty value, and use it to support improved SpecificCharacterSet multivalue checking, without causing spurious errors for single valued use
com/pixelmed/validate/CompileDicomIODDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/12/18
Update list of BodyPartExamined defined terms to match Annex L of 2013
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/12/18
Update list of BodyPartExamined defined terms to match Annex L of 2013
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/12/18
Incorrectly committed change
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/12/18
FlowCompensationDirection may not be present otherwise
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2013/12/18
Avoid excessive splits on floating point jitter in ImageOrientation due to literal string comparison of DS as encoded; handle all DS/FL/FD specially by converting to 4 digit precision scientific string values before comparison
com/pixelmed/dicom/FrameSet.java
---------------------
2013/12/23
Add XSD schema for context groups, but do not use it (specify it in xml files) yet else causes failure (in URI resolver?)
com/pixelmed/validate/contextgroups.xsd
---------------------
2013/12/23
Modify context group XSD types, make extensible xs:boolean, add optional csv attribute, make name xs:NMTOKEN, add versions where missing to context group source, correct typos in 10031; remove target namespace in schema; now works so activate it
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/PixelMedContextGroupsSource.xml
com/pixelmed/validate/contextgroups.xsd
---------------------
2013/12/24
final names of DICONDE IQI elements
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2013/12/27
Treat absent, empty and space filled string attribute values, including PN and PatientName as the same with respect to database insertion (and in creating description for tree model for patient entity) (000694)
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/DescriptionFactory.java
---------------------
2014/01/03
Add main method to ColorUtilities to convert sRGB and CIELab
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/Makefile
---------------------
2014/01/04
If frame anatomy can be derived, but not laterality, add U for unpaired if derived anatomy is unpaired
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2014/01/05
Cleanup legacy enhanced CT and MR multiframe creation, including adding contrast/bolus stuff, removing attributes repeated per-frame from unassigned shared, adding MR image module attributes, and not making up burned in annotation, content qualification, etc. if not known
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2014/01/05
Add final text of legacy converted enhanced CT and MR (Sup 157), as well as tidy up Specimen (Sup 122) and Device modules, and hierarchical SOP instance reference macro (CP 700)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2014/01/05
Change method used when copying sequences from source
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2014/01/05
Use TriggerTime to offset AcquisitionTime in MR if present (illegal but useful pattern observed in non-cardiac MR images such as DCE-MR)
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2014/01/05
Update Mac JavaApplicationStub
DicomCleaner.app/Contents/MacOS/JavaApplicationStub
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub
DoseUtility.app/Contents/MacOS/JavaApplicationStub
ECGViewer.app/Contents/MacOS/JavaApplicationStub
---------------------
2014/01/05
When creating multiframes, use existing stack or temporal position attributes if present, else build a (single) stack if all slices parallel
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/validate/Makefile
---------------------
2014/01/05
Factor out stack handling into separate class, and re-use existing stacks if same area traversed in different frame sets when creating multi-frame images, and incremenatlly assigning different stack IDs within set of frame sets being converted
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/validate/Makefile
---------------------
2014/01/05
Don't replace existing stack
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2014/01/05
Add validity check for stack constructor and use it
com/pixelmed/dicom/StackOfSlices.java
---------------------
2014/01/05
Do not inadvertently add default timezone to AcqusitionDateTime
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/validate/Makefile
---------------------
2014/01/05
Update copyright file
COPYRIGHT
---------------------
2014/01/06
Add control over whether or not to add SR-specific request and procedure stuff when creating or updating CompositeInstanceContext, and do not add it when not making SRs (e.g., when making MF images)
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/validate/Makefile
---------------------
2014/01/06
Add final text attribtues and SOP classes for Breast Tomo Projection (Sup 165)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/01/07
Update data dictionary with CPack 74
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/01/11
Tidy up some data element names and keywords whilst resolving inconsistencies between parts 3 and 6
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/01/19
Tidy up more data element names and keywords whilst resolving inconsistencies between parts 3 and 6
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/01/20
Change case of Multi-Frame to Multi-frame in element description
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/01/26
Fix writing of multiple frames read from single file (000695)
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
---------------------
2014/01/28
Implement Jim Irrer's read termination strategy pattern
com/pixelmed/dicom/AttributeList.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeList_AllTests.java
---------------------
2014/01/28
Add check that non-empty value is present for all string content items
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
---------------------
2014/01/28
Imperfect fix for ambiguous multiple TID 1021 inclusion in TID 10003a and 10003b
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/02/03
Add manifest permissions and application name to allow webstart applications that require all-permissions to run on recent more security-conscious JREs
Makefile
webstart/Manifest.txt
---------------------
2014/02/03
Include manifest for webstart permissions in source distribution
Makefile
---------------------
2014/02/03
Start work on per-attribute class methods to validate and repair values that do not comply with VR (000402)
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
---------------------
2014/02/21
Prelimimary efforts at bad attribute values for VR repair methods
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/test/TestRepairAttributeValues.java
---------------------
2014/03/01
Assign a UID for 99PMP, add full list of coding schemes to CodingSchemeIdentification including standard and known private schemes, add a convenience method to add/replace CodingSchemeIdentificationSequence for AttributeList and document it, and use it in app/InsertCodeSequence and dose/CTDose, and allow for registry (or any other attribute of CodingSchemeIdentification) to be empty or null and not write it if so
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2014/03/01
Remove debugging messages
com/pixelmed/dicom/CompositeInstanceContext.java
---------------------
2014/03/01
Update data dictionary
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/03/03
Separate template ID detected in template identification sequence from template ID used in defintions file, since may be different (e.g., for private mapping resources)
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2014/03/03
Add draft QIICR measurement template, and supporting standard templates including planar and volumetric ROIs (with corrected relationships), and necessary context groups
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/03/03
Make CID 5001 countries use Title Capitalization rather than all caps
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2014/03/04
More batch and shell files in release; move validate.sh to DicomInstanceValidator.sh for consistency with naming of others
DicomInstanceValidator.sh
Makefile
validate.sh(DEAD)
---------------------
2014/03/09
tidy up comment
com/pixelmed/dicom/VersionAndConstants.java
---------------------
2014/03/09
Switch to using private float and doubel Pixel Data elements rather than reusing existing Pixel Data element with special Pixel Representation
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/display/SourceImage.java
---------------------
2014/03/09
use list.getPixelData() method throughout, and change name of PrivatePixelMedLegacyFloatingPointImageStorage to PrivatePixelMedFloatingPointImageStorage since there is nothing legacy about it
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2014/03/09
use list.getPixelData() method throughout
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/Overlay.java
---------------------
2014/03/09
Factor out method to replace Pixel Data (including private float or double), to avoid ending up with both during conversion, and add method to remove entire group of tags from list
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/PrivatePixelData.java
---------------------
2014/03/09
Add utility method to remove a specific functional group
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/Makefile
---------------------
2014/03/09
During scaling, remove any existing (now incorrect) PixelValueTransformation functional group, and use ModalityTransform to extract either top level or PixelValueTransformation rescale values to use
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/Makefile
---------------------
2014/03/09
Use private float and double Pixel Data for NRRD conversion too
com/pixelmed/convert/NRRDToDicom.java
---------------------
2014/03/11
Factor out VOI and Pixel Value Transformation macros into functional group utilities, and add window generation for double as well as float value types based on range encountered
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
---------------------
2014/03/11
insert window and rescale values at top level or into functional group macros depending on generated SOP Class
com/pixelmed/convert/NRRDToDicom.java
---------------------
2014/03/11
Add double scaling round trip test
com/pixelmed/apps/Makefile
---------------------
2014/03/11
Add functional group pointer to multiframe functional groups if creating SC Word SOP Class, and move rescale attributes into functional group from to level if creating floating point SOP Class
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
---------------------
2014/03/11
Correct VR of RescaleType to LO
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
---------------------
2014/03/11
Add choice of OD or OF for reversing integer scaling
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/Makefile
---------------------
2014/03/11
Remove pixel data related attributes like Bits Stored if not used when converting to floating point, and add frame increment pointer
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
---------------------
2014/03/11
Add round trip scaling tests when converting nifti and nrrd, and use andiff rather than dcdiff since former handles OF and OD pixel data whereas latter does not yet
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
---------------------
2014/03/12
Include factored out measurement method and finding site content items in parent of numeric measurement
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/03/12
Begin work on inserting real world value maps
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
---------------------
2014/03/12
Add a constructor to created CodedSequenceItems from a single string tuple
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
---------------------
2014/03/12
define some private codes for RWVM experiments
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2014/03/12
Extend factory to support creation of NUMERIC as well as NUM Value Type for content item to allow reuse when creating acquisition/protocol context template items
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2014/03/12
Add quantity definition content items from command line when inserting real world values
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2014/03/13
Add CFBundleTypeExtensions and CFBundleIdentifier to assist with having DicomImageViewer being associated with (used to open) '.dcm' files
DicomImageViewer.app/Contents/Info.plist
---------------------
2014/03/19
Add setValues() method for US, SS, UL, SL
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2014/03/20
Add support for nonSR variants of numeric content item that have a different value type by adding constructors makeXXX methods
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2014/03/20
Extend range of content items that can be inserted in RWVM for quantity descriptors
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/Makefile
---------------------
2014/03/20
Avoid forbidden SegmentNumber of 0 by adding 1 to index value from source image
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2014/03/20
Add text of NCI-ISBI_2013_ProstateChallenge training segmentation
com/pixelmed/convert/Makefile
com/pixelmed/display/Makefile
com/pixelmed/display/SuperimposedImage.java
---------------------
2014/03/20
Use UMLS CUI as code value if no other code available
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2014/03/23
Correct byte buffer and offset returned in debugging message in EncapsulatedInputStream.read()
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2014/03/23
Debugging message
com/pixelmed/dicom/AttributeList.java
---------------------
2014/03/23
Do NOT assume that first reader found is the best one ... check them all and make explicit choices; also handle new vendor name (Oracle rather than Sun) for the standard JPEG reader (that we want to avoid if possible)
com/pixelmed/dicom/AttributeList.java
---------------------
2014/03/24
Add RLE Transfer Syntax decompression, which involved messing with EncapsulatedInputStream to control whether or not to look for JPEG EOI markers for fragment spanning
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/display/Makefile
com/pixelmed/test/Makefile
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestRepairAttributeValues_hold.java
---------------------
2014/03/24
Add support for two byte (16 bit) RLE
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/display/Makefile
---------------------
2014/03/24
Allow RLE for file import, and test RLE with DecompressDicomFiles
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/Makefile
com/pixelmed/display/DicomCleaner.java
---------------------
2014/03/24
Handle color by pixel as well as color by plane 8 bit RLE images
com/pixelmed/dicom/AttributeList.java
---------------------
2014/03/24
Only included CHANGES on HEAD branch
Makefile
---------------------
2014/03/25
decompressPixelData should not be declared static - must be explicitly set to false for each instance constructed
com/pixelmed/dicom/AttributeList.java
---------------------
2014/03/26
Correct conditional check for Exposure present to use NUM not CODE in TID 10003b
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/03/26
Change message about Content Item not in template to be a Warning rather than an Error
com/pixelmed/test/TestCTDose.java
com/pixelmed/validate/CheckSRContentItemsUsed.xsl
---------------------
2014/03/27
Use quaternion (NIfTI 'method 2') if present as source for orientation and position if no affine transform (NIfTI 'method 3') available, and default to axial (with warning) if only translation ('method 1')
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2014/03/27
allow DICOM code in label map file, and test with prostate label map
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
---------------------
2014/03/28
More private PMP codes for SUV quantity experiments
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2014/03/29
Windowing of true color images
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2014/03/31
New data elements from WG 6 March CPs
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/04/03
Color JPEG lossless images are not color converted by codecs, so do not set colorSpaceWasConvertedToRGBDuringDecompression (000704)
com/pixelmed/dicom/AttributeList.java
---------------------
2014/04/03
Handle RLE images with odd length segments not correctly padded (000705)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2014/04/06
Set imgMin and imgMax for single bit images to allow useful default window values (000706)
com/pixelmed/display/SourceImage.java
---------------------
2014/04/09
TID 1204 is U not M in KOS TID 2010 (000709)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/04/16
Update Javadoc
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/SchemeAndValuePair.java
---------------------
2014/04/17
Extract RWVM from top level dataset as per CP 1252
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/display/SingleImagePanel.java
---------------------
2014/04/17
Allow for 8 bit packed palette color LUTs
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2014/04/17
Require explicit indication that intent for color palette is to be supplemental rather than applied to all pixel values, to allow for standard extended SOP Classes (?legal given conditions on attributes) that add palettes to parametric maps in, e.g., monochrome MR images (000710)
com/pixelmed/display/SourceImage.java
---------------------
2014/04/19
Query test
com/pixelmed/query/Makefile
---------------------
2014/04/19
Sup 159 SOP Class UID and data element
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/04/20
Add Sup 124 data element tags
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/04/25
Add private codes for PET quantitiative indices
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2014/04/29
Correct condition on Exposure in X-Ray RDSR when X-Ray Tube Current and Exposure Time are present (000716)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/05/02
Add specific exceptions to report when codecs not available or codec fails due to JPEG component zero issue in standard JPEG codec
com/pixelmed/dicom/AttributeList.java
---------------------
2014/05/06
More work on whether or not to throw exception reading AttributeList
com/pixelmed/dicom/AttributeList.java
---------------------
2014/05/22
Generalize combined anatomic concept classes to support combining more than two concepts, require all concepts or self to be included, and handle (some) permutatations of synonyms and combinations of combinations
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
---------------------
2014/05/27
More combination body parts
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
---------------------
2014/05/27
QIICR private codes
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2014/05/27
Add various context groups automatically extracted from 2013 PS3.16 to support measurement templates
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2014/05/27
Don't try to include equation template when no appropriate concept present, use temporary CP codes for QIICR measurement templates for test
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/05/28
Fix nesting of content items in QIICR_1001 and add refactored RWVM references per updated CP 1386 and 1388
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/06/08
stop complaint about missing file if zero length string argument (000717)
com/pixelmed/display/DicomImageViewer.java
---------------------
2014/06/08
update to hsqldb 2.3.2 (seems to be seamless; no code changes)
lib/additional/hsqldb.jar
---------------------
2014/06/11
Trim space from private creators (sometimes see trailing space in Philips creators in old objects) and add Philips MR known safe scaling attributes (CP 1307)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2014/06/22
Correct multipler for SUVbsa (000719)
com/pixelmed/dicom/SUVTransform.java
---------------------
2014/06/22
Comment out SourceImage RealWorldValueTransforms debugging
com/pixelmed/display/SourceImage.java
---------------------
2014/06/26
Add utility to find and copy selected DICOM files
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2014/06/26
Add utility to find and copy selected DICOM files using database
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/Makefile
---------------------
2014/07/03
More private storage SOP Classes
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2014/07/03
Update dictionary to 2014a
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/07/17
Add trademark symbol to webstart usage and logo
webstart/DicomCleanerUsage.html
webstart/DoseUtilityUsage.html
webstart/images/PixelMedLogoAndTitle.gif
---------------------
2014/08/16
Add to list of permissable RT attributes too long toe encode in explicit VR that are allowed through
com/pixelmed/dicom/AttributeList.java
---------------------
2014/08/16
Add all RT attributes too long to encode in explicit VR mentioned in Bosch article and allow them through
com/pixelmed/dicom/AttributeList.java
---------------------
2014/08/16
Correct multipler for SUVbsa (000719)
com/pixelmed/test/TestSUVTransformValues.java
---------------------
2014/08/16
Throw exception if VL will not fit in short EVR (000722)
com/pixelmed/dicom/Attribute.java
---------------------
2014/08/16
Do not stop cleaning if one file throws exception, and improve logging of failed cleaning (000723)
com/pixelmed/display/DicomCleaner.java
---------------------
2014/08/31
Update Doxyfile configuration for newer Doxygen version
Doxyfile
---------------------
2014/08/31
Time steps during Association Initiation if debugging
com/pixelmed/network/AssociationInitiator.java
---------------------
2014/08/31
Add retention and reuse of associations for query and retrieval, counting of pending responses during move without progress in terms of receipt of instances used to limit waiting indefinetly, modify MoveDicomFilesIntoHierarchy methods to return file name rather than boolean, and modify replaced dangerous characters in path to allow hyphen, and to not remove runs of spaces or underscores entirely, and use these in SynchronizeFromRemoteSCP, including moving received files into hierarchy after receipt (and reading only up to end of relationship group in AttributeList to achieve that), and additional options including study rather than (default, old) instance level retrieval, and a filename containing a list of PatientName query patterns
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/StudyRootQueryInformationModel.java
---------------------
2014/08/31
Make sure list.write() is consistent with actual TransferSyntax and what is used in FileMetaInformation header, and always convert Implicit to Explicit VR as a matter of policy
com/pixelmed/dicom/AttributeList.java
---------------------
2014/08/31
Do not decompress pixel data when building DICOMDIR (not actually sure why we even read it, since not building icons)
com/pixelmed/dicom/DicomDirectory.java
---------------------
2014/09/03
Add a method to select a specific column (key, attribute)
com/pixelmed/database/DatabaseInformationModel.java
---------------------
2014/09/03
Add StudyReceiver application to wait for composite instances, store them, and when study is complete based on nothing received after elapsed time, move into destination folder with hierarchy
com/pixelmed/apps/Makefile
com/pixelmed/apps/StudyReceiver.java
---------------------
2014/09/04
Retarget compilation for Java 1.7 (was Java 1.5)
Makefile
Makefile.common.mk
com/pixelmed/apps/Makefile
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/doseocr/Makefile
com/pixelmed/ftp/Makefile
com/pixelmed/geometry/Makefile
com/pixelmed/network/Makefile
com/pixelmed/test/Makefile
---------------------
2014/09/04
Export JAVAVERSIONTARGETJARFILE before javac
Makefile.common.mk
---------------------
2014/09/09
Cleanup javadoc and some method signatures
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2014/09/09
Add UR VR (CP 1324)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/UniversalResourceAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
---------------------
2014/10/15
Add recursive directory search for files to performance test
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2014/10/15
Parameterize target environment variable
Makefile.common.mk
---------------------
2014/10/16
Add segmented cerebellum on PET test case for superimposition
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
---------------------
2014/10/16
Add Segmentation IOD to validator (000731)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2014/10/16
Do not write empty Laterality when converting (000732)
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
---------------------
2014/10/16
When making segmentation from originals and reusing Shared FGs, remove everything except PixelMeasures and PlaneOrientation (000733)
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2014/10/20
write SOP Instance not Class UID in Common Instance Reference Module (000734)
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2014/10/23
Handle dimensions greater than 3D with respect to computing position; add support for qform (method 2) calculation, including application of qfac (reflection); more test samples
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2014/10/23
Reinsert teststudyreceiver.properties into cvs, since was causing cvsps to fail for unknown reason
com/pixelmed/apps/teststudyreceiver.properties
---------------------
2014/10/23
Synchronize dictionary with dicom3tools (no changes)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/10/23
Update JNLP java version requirement to 1.7 to match jar file
webstart/ConvertAmicasJPEG2000FilesetToDicom.jnlp
webstart/DicomCleaner.jnlp
webstart/DicomCleanerExperimental.jnlp
webstart/DicomImageBlackout.jnlp
webstart/DicomImageViewer.jnlp
webstart/DicomImageViewerExperimental.jnlp
webstart/DoseUtility.jnlp
webstart/DoseUtilityExperimental.jnlp
webstart/DownloadOrTransmit.jnlp
webstart/ECGViewer.jnlp
webstart/MediaImporter.jnlp
webstart/WatchFolderAndSend.jnlp
---------------------
2014/10/26
Update MacOS apps to use JavaAppLauncher rather than JavaApplicationStub (still using native rather than bundled JRE)
Makefile
DicomCleaner.app/Contents/Info.plist
DicomCleaner.app/Contents/MacOS/JavaAppLauncher
DicomCleaner.app/Contents/MacOS/JavaApplicationStub(DEAD)
DicomImageViewer.app/Contents/Info.plist
DicomImageViewer.app/Contents/MacOS/JavaAppLauncher
DicomImageViewer.app/Contents/MacOS/JavaApplicationStub(DEAD)
DoseUtility.app/Contents/Info.plist
DoseUtility.app/Contents/MacOS/JavaAppLauncher
DoseUtility.app/Contents/MacOS/JavaApplicationStub(DEAD)
ECGViewer.app/Contents/Info.plist
ECGViewer.app/Contents/MacOS/JavaAppLauncher
ECGViewer.app/Contents/MacOS/JavaApplicationStub(DEAD)
---------------------
2014/10/27
Make MessageServiceElementCommand class public (000736)
com/pixelmed/network/MessageServiceElementCommand.java
---------------------
2014/11/06
Correct VR of Patient ID in query (000738) and add Accession Number as query key (000737)
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
webstart/DicomCleanerExperimental.jnlp
---------------------
2014/11/06
Add new DICONDE data elements for E2663-11
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/11/06
Japanese text for remove (acquisition) protocol name
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2014/11/07
Add previous button to blackout (000739)
com/pixelmed/display/DicomImageBlackout.java
---------------------
2014/11/10
Move Previous button to left
com/pixelmed/display/DicomImageBlackout.java
---------------------
2014/11/10
Add Sup 172 data elements and SOP Class, and use standard pixel data attributes in conversions
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/11/13
Do not use MeasuredValueSequence for non-SR numeric content items (000740)
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2014/11/13
Do not use MeasuredValueSequence for non-SR numeric content items (000740)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
---------------------
2014/11/13
Add data elements CPs 1350, 1383, 1399
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/11/13
Do not use MeasuredValueSequence for non-SR numeric content items (000740)
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2014/11/13
Use Sup 172 Parametric Map instead of private floating point SOP Class - created FP objects will be missing Dimensions, Anatomy, Frame Content
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
---------------------
2014/11/13
Use CP 1387 quantity in reporting pixel values in status bar from RWVM
com/pixelmed/dicom/RealWorldValueTransform.java
---------------------
2014/11/14
Change Sup 172 data elements to FT2, using 08 and 09 to avoid conflict with old ACR-NEMA PS3.2 data compression
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2014/11/26
Merge mddx-redaction branch
DeidentifyAndRedact.bat
DeidentifyAndRedact.sh
DeidentifyAndRedactWithOriginalFileName.bat
Makefile
StudyReceiver.bat
studyreceiver.properties
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/Makefile
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/Makefile
---------------------
2014/11/26
Restore logging of successful import in DicomCleaner now that not logged by MediaImporter
com/pixelmed/display/DicomCleaner.java
---------------------
2014/11/26
Add control over one fragment per frame or one frame per fragment if not JPEG in EncapsulatedInputStream; allows for RLE writing what was written in DicomCleaner (000741)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
---------------------
2014/11/26
Include video SOP Classes in image storage category (000742)
com/pixelmed/dicom/SOPClass.java
---------------------
2014/11/26
Detect when frames are seperable (JPEG, RLE) versus lumped together in one fragment (MPEG) to allow writing of uncompressed encapsulated MPEG input (000743)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/TransferSyntax.java
---------------------
2014/11/27
If cannot convert Transfer Syntax, only propose the actual encoded Transfer Syntax (000747)
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2014/11/27
Set trapped exceptions flag when failure occurs during sending of instance, not just when connection/Association established (000751)
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2014/11/27
Consider encoded TransferSyntax when given set of multiple files in PresentationContextListFactory, to allow sending instances encoded in recognized but unsupported Transfer Syntaxes (000750)
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCStore.java
---------------------
2014/11/27
Make DicomCleaner configurable to accept any Transfer Syntax (000752)
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/test/TestCleanerReceiveAndClean.java
---------------------
2014/11/27
Document JPEG and any transfer syntax changes to DicomCleaner
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanel.png
webstart/images/DicomCleanerControlPanelPassThru.png
webstart/images/DicomCleanerMainPanelAfterClean.png
webstart/images/DicomImageBlackoutJPEG.png
---------------------
2014/11/28
Only reject JPEG Extended .51 for standard reader if not 8 bit (000753)
com/pixelmed/dicom/AttributeList.java
---------------------
2014/11/29
Turn off debugging messages
com/pixelmed/display/DicomCleaner.java
---------------------
2014/12/06
Correct units from dGy to mGy for average glandular dose in TID 10003b as per CP 1194 (TID 10005 already fixed)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2014/12/06
Add pixelmed_codec.jar to webstart
Makefile
lib/additional/pixelmed_codec.jar
webstart/DicomCleaner.jnlp
webstart/DicomCleanerExperimental.jnlp
---------------------
2014/12/06
Factor out path to pixelmed_codec and point it to lib/additional
Makefile.common.mk
com/pixelmed/apps/Makefile
com/pixelmed/display/Makefile
---------------------
2014/12/06
Update documentation to describe pixelmed_codec dependency
README
---------------------
2014/12/06
Update to 20141206 release of pixelmed_codec
lib/additional/pixelmed_codec.jar
---------------------
2014/12/06
Add com.pixelmed.utils.CapabilitiesAvailable class with haveJPEGBaselineSelectiveBlockRedaction() and use it to detect presence or absence of necessary codec at runtime
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
com/pixelmed/test/Makefile
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/Makefile
---------------------
2014/12/06
Factor out test for bzip2 codec present (000744)
Makefile.common.mk
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/utils/CapabilitiesAvailable.java
---------------------
2014/12/06
Factor out test for lossless JPEG and JPEG 2000 codecs present (000744)
Makefile.common.mk
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/utils/CapabilitiesAvailable.java
---------------------
2014/12/06
Add support for JPEG-LS import and network reception in various apps if codec available (000757)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/utils/CapabilitiesAvailable.java
---------------------
2014/12/08
Add explicit control over all or safe private data element retention in main() method, and make default safe (rather than all) (000758)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/Makefile
---------------------
2014/12/10
Add main() method to CapabilitiesAvailable for convenience of using from command line, and include dumpListOfAllAvailableReaders() factored out of AttributeList where it was a private method used for debugging
com/pixelmed/dicom/AttributeList.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/Makefile
---------------------
2014/12/13
Update JIIO codec documentation
README
---------------------
2014/12/13
Remove clibwrapper_jiio.jar from JIIOADDITIONALJARS, since not used in pure Java settings
Makefile.common.mk
---------------------
2014/12/13
Update JIIO codec documentation
README
---------------------
2014/12/17
Improve request handler comparators when input values not weel formed, and avoid throwing 'Comparison method violates its general contract' exception (000760)
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
---------------------
2014/12/17
Window RGB image in ConsumerFormatImageMaker (000700)
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2014/12/17
Include JPEG selective redaction codec in Mac binary of DicomCleaner
Makefile
---------------------
2015/01/03
More QIICR private codes
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2015/01/03
Switch from deprecated excalibur to current commons-compress for bzip2, since may also want to use other decompressors
DeidentifyAndRedact.bat
DeidentifyAndRedact.sh
DeidentifyAndRedactWithOriginalFileName.bat
DicomBrowser.sh
DicomCleanerAssumingJREInstalled.bat
DicomCleanerWithOwnJRE.bat
DicomImageBlackout.bat
DicomImageViewer.bat
DicomImageViewer.sh
DicomImageViewerWithCDJRE.bat
DicomImageViewerWithOwnJRE.bat
DicomInstanceValidator.sh
DicomSRValidator.sh
DoseUtilityAssumingJREInstalled.bat
DoseUtilityWithOwnJRE.bat
Makefile
Makefile.common.mk
MammoImageViewer.bat
MammoImageViewer.sh
MoveDicomFilesIntoHierarchy.sh
NetworkMediaImporter.bat
NetworkMediaImporter.sh
README
StructuredReportBrowser.sh
StudyReceiver.bat
LICENSES/excalibur.LICENSE.txt(DEAD)
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/server.bat
docs/DicomImageViewer/UserManual.doc
docs/DicomImageViewer/UserManual.pdf
lib/additional/commons-compress-1.9.jar
lib/additional/excalibur-bzip2-1.0.jar(DEAD)
webstart/DicomCleaner.jnlp
webstart/DicomCleanerExperimental.jnlp
webstart/DicomImageViewer.jnlp
webstart/DicomImageViewerExperimental.jnlp
webstart/DoseUtility.jnlp
webstart/DoseUtilityExperimental.jnlp
webstart/DownloadOrTransmit.jnlp
---------------------
2015/01/03
Tidy up javadoc
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
---------------------
2015/01/03
Extend support of making pixel data from compressed files from gzip to unix compress and bzip2, and use it for making DICOM from visible human true color raw images; also handle interleaved versus non-interlaved formats as planar configuration
com/pixelmed/convert/Makefile
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/utils/CapabilitiesAvailable.java
---------------------
2015/01/07
Remove dependence on filename being listed by storage SCP for C-GET test to work, since it isn't any more
com/pixelmed/network/Makefile
---------------------
2015/01/07
Restore insertion of default list of transfer syntaxes when making presentation context if none supplied, to prevent C-GET SCU failing with missing presentation context for Abstract Syntax exception (000765)
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2015/01/07
Update RawRGBToDicomMultiFrame to better handle VHM position and orientation, as well as handling pixel data VL greater than signed integer max and checking for maximim encodeable length; more test cases
com/pixelmed/convert/Makefile
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
---------------------
2015/01/08
Treat Presentation Context ID as unsigned in debugging output
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2015/01/08
Start presentation contexts from 0x01, not 0x03 (000767)
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2015/01/08
Create presentation context for ourChoice when TransferSyntax supplied as unknown, e.g., for C-GET used in SynchronizeFromRemoteSCP, and throw exception when failure to create any presentation contexts (000766)
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2015/01/08
Create presentation context for ourChoice when TransferSyntax supplied as unknown, e.g., for C-GET used in SynchronizeFromRemoteSCP, and throw exception when failure to create any presentation contexts (000766)
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2015/01/17
Add tests for redaction without meta information header
com/pixelmed/apps/Makefile
---------------------
2015/01/17
Add data elements for long codes (CP 1031)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/01/17
Add UC VR (CP 1031)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/UnlimitedCharactersAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/test/TestRepairAttributeValues.java
---------------------
2015/01/18
Change UniversalResourceAttribute to use String rather than Text base class (allowing multiple values) and use constructors without SpecificCharacterSet since not affected by it, otherwise constructor not found during exception during read (000767)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/UniversalResourceAttribute.java
---------------------
2015/01/18
Skip bytes to keep stream in sync if exception in newAttribute(), e.g., if internal inconsistency such as constructor not found during exception during read (000767)
com/pixelmed/dicom/AttributeList.java
---------------------
2015/01/27
Add new KOS reasons (CP 1340, CP 1152)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2015/01/27
Update webstart notes
webstart/NOTES
---------------------
2015/01/27
Guess from first few bytes rather than assume when empty or missing Transfer Syntax UID in meta information header (000768)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomInputStream.java
---------------------
2015/01/28
Restore ability to perform selective query with command line option (000769)
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2015/02/01
Do not assume vecmath is available in runtime when testing geometry and multiframe
Makefile.common.mk
com/pixelmed/test/Makefile
---------------------
2015/02/11
Correct typo in SR IOD name for 3D SR
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/02/11
Correct VR of Referenced Segment Number created for SR Content Item
com/pixelmed/dicom/ContentItemFactory.java
---------------------
2015/02/11
Keep logs of selected SR validator output for regression testing
com/pixelmed/validate/testvalidatechestcad.txt.bz2
com/pixelmed/validate/testvalidateko.txt.bz2
com/pixelmed/validate/testvalidatemammocad4.txt.bz2
com/pixelmed/validate/testvalidatesr.txt.bz2
---------------------
2015/02/11
Add TID 1500 and its support (CP 1386) and remove experimental precursor TID QIICR_1000; disambiguate inclusion of TID 1410 versus 1411 included from 1500 by conditions looking inside; also fix incorrect use of requirementType instead of correct requiredType in some templates, and add conditions that are needed as a result (including those by reference versus by value) or remove conditional requirement when real world
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/02/25
Add static to initialization block of excludeFromCopyingIntoFunctionalGroups to prevent Specific Character Set being included in shared functional group (000772)
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2015/02/25
Copy TextAttributes (000773)
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2015/03/10
Add experimental QIICR_2000 SR template and friends for Iowa PET clinical data
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/03/17
Extend readUnsigned16 and writeUnsigned16 of short[] to handle size between 1GB and 2GB, which was failing before because multiplied by 2 for length of byte[], which can be avoided (000774)
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
---------------------
2015/03/19
Correct coding scheme for time point in TID 1502 (000775)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/03/19
Update data dictionary with data elements for CP 1420, CP 1430, CP 1434
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/03/19
Add Activity Session row to measurement groups (in anticipation of CP 1466)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/03/19
Remove debugging message
com/pixelmed/dicom/VOITransform.java
---------------------
2015/03/19
Just report unsupported SOP Class rather than aborting handling of other selected files in browser
com/pixelmed/display/DicomBrowser.java
---------------------
2015/04/03
Correct classpath to include pixelmed_codec (000776)
DicomCleanerAssumingJREInstalled.bat
DicomCleanerWithOwnJRE.bat
---------------------
2015/04/03
Add data elements for Sup 173
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/04/24
Use quadruped letters (per Smallwoord) on displayed annotations (000777)
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2015/04/26
Add test for populating/extracting value from Original/Modified Attributes Sequence
com/pixelmed/test/Makefile
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
---------------------
2015/04/26
Handle attribute value in implicit VR that is too large for VL field of explicit VR by switching to writing UN VR per proposed CP 1066 (000778)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
---------------------
2015/04/26
Correct typos in comment
com/pixelmed/dicom/Makefile
---------------------
2015/04/28
Allow use of encapsulated PixelData even if incorrectly terminated (missing or bad Sequence Delimiter), whether decompressing or not, rather than silently failing to create PixelData attribute and ignoring IOException from EncapsulatedInputStream.readSequenceDelimiter() (000779)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2015/04/28
Allow display of RT Dose SOP Class in DicomImageViewer, even though not SOPClass.isImageStorage() (000782); will display 16 bit image, but still not 32 bit (see unfixed 000657)
com/pixelmed/display/DicomImageViewer.java
---------------------
2015/04/28
Handle endianness issues with respect to UN VR as replacement for actual VR when too large for short VR attributes, when reading, writing and copying (000778); also block conversion of UN to dictionary VR if bytes need to be swapped (000781)
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
---------------------
2015/04/28
Update copyright header throughout to this year
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2015/04/30
Add a keyboard shortcut (S) to set the window statistically (000783)
com/pixelmed/display/SingleImagePanel.java
---------------------
2015/05/13
Do not decompress for display if we don't have to in DicomImageBlackout (000784) in order to take advantage of not needing to when reacting JPEG; do it by copying AttributeList JIIO decompression frame stuff into new class CompressedFrameDecoder (still need to factor out of AttributeList, so code mostly duplicated); need to recreate BufferedImage rather than using that returned by Reader due to difference in behavior between standard and native JIIO codecs (000785)
DeidentifyAndRedact.bat
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/Makefile
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2015/05/13
Selectively use CompressedFrameDecoder by setting setDecompressPixelData() true only if cannot decompress; currently suppprted only for JPEG Baseline .50; add some RLE and J2K tests to make sure they still work (still decompress on read rather than being deferred)
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
---------------------
2015/05/14
Make use of Dicom.StorageSCUDebugLevel property in DicomCleaner (000788)
com/pixelmed/display/DicomCleaner.java
---------------------
2015/05/14
Move Association debugging to level 2 rather than 3 (000789)
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
---------------------
2015/05/17
Add pixelmed_codec.jar to Windows DicomCleaner executable release (000791)
Makefile
---------------------
2015/05/17
Add correct JIIO license files to Windows executables (000792)
Makefile
---------------------
2015/05/17
Correct failure to convert PhotometricInterpretation to RGB when decompression is deferred by anticipating this possibility during AttributeList.read(), allowing dependence on actually being decompressed to be overridden, and use this in DicomImageBlackout (000793); also correct LossyImageCompressionRatio if present but has zero value (000794)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/utils/CapabilitiesAvailable.java
---------------------
2015/05/21
Correct typo in comment
com/pixelmed/display/SuperimposedImage.java
---------------------
2015/05/21
Add different default colors for different segments in same instance when RecommendedDisplayCIELabValue absent (000795)
com/pixelmed/display/SuperimposedDicomSegments.java
---------------------
2015/05/21
Add CID 4020 PET radionuclide and CID 4021 PET Radipharmaceutical since referenced by Measurement templates (000797)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2015/05/21
Warn about rather than silently ignore extra CODE or TEXT content items in measurement templates even though the standard allows generic question/answer pairs of this form with no suggested content groups (000798)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/05/21
Add Finding to measurement templates (draft CP 1465)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/05/28
Add another color to SRGB Lab round trip test
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
---------------------
2015/05/31
Add UID for 99IPCMR Coding Scheme
com/pixelmed/dicom/VersionAndConstants.java
---------------------
2015/05/31
Add support separate header and data files for NIfTI
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2015/05/31
Add Analyze to DICOM converter (000761)
com/pixelmed/convert/AnalyzeException.java
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/Makefile
---------------------
2015/05/31
Add ability to merge study, equipment, frame of reference not just patient context, with separate utility than MergeCompositeContext since latter requires cross references (000799)
com/pixelmed/apps/Makefile
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/convert/Makefile
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
---------------------
2015/05/31
Use original patient, study and frame of reference context for mouse mtr parametric map converted from Analyze
com/pixelmed/convert/Makefile
---------------------
2015/05/31
Add a mechanism to selectively merge functional groups from one file to others, to allow original acquisition information (e.g., spatial) to be propagated to processed images converted from other formats (000800)
com/pixelmed/apps/Makefile
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/convert/Makefile
com/pixelmed/dicom/FunctionalGroupUtilities.java
---------------------
2015/05/31
Add MTR RWVM to mouse PCK sample
com/pixelmed/convert/Makefile
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2015/06/01
Merge Dimensions Module if -framecontent specified during functional groups merge
com/pixelmed/apps/MergeFunctionalGroups.java
---------------------
2015/06/01
Clean up added attributes to make as compliant as possible when SOP Class requires Enhanced Equipment, Content stuff, etc.
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/Makefile
---------------------
2015/06/01
Add ability to set top level and shared functional group attributes and test with mouse conversion
com/pixelmed/apps/Makefile
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/convert/Makefile
lib/additional/javax.json-1.0.4.jar
lib/additional/javax.json-api-1.0.jar
---------------------
2015/06/01
Add JSON jar files to lib/additional in release and readme, used for com.pixelmed.apps.SetCharacteristicsFromSummary
Makefile
---------------------
2015/06/01
Add JSON jar files to lib/additional in release and readme, used for com.pixelmed.apps.SetCharacteristicsFromSummary
Makefile
README
---------------------
2015/06/02
Add Spacing Between Slices to Pixel Measures functional group produced during conversion (CP 1427); NB. will be overridden if later apply com.pixelmed.apps.MergeFunctionalGroups -spatial
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
---------------------
2015/06/02
Update CodingSchemeIdentification before writing or rewriting
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
---------------------
2015/06/02
Add data elements from CP packet 81 (CPs 1321,1322,1402,1411,1438)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/06/02
Handle unexpected SequenceItemDelimiter specially (warn, ignore) rather than reading VR bytes that are not there (000801)
com/pixelmed/dicom/AttributeList.java
---------------------
2015/06/02
Populate Analyze mouse conversion header with more attributes for demonstration
com/pixelmed/convert/Makefile
---------------------
2015/06/03
Tidy up javadoc
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/06/03
Update javadoc and doxygen; doxygen does not link fully qualified links to class names, or unqualified links to methods that are used on deprecation page
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
---------------------
2015/06/04
Correct missing space in exception message
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2015/06/15
Improve javadoc
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2015/06/15
Add Extensible SR SOP Class (Sup 186)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2015/06/15
Add MPEG 4.2 Transfer Syntax UIDs and Stereo Pairs Present to IODs (Sup 180)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2015/06/15
Renove experimental mouse conversion of processed data with additional attributes
com/pixelmed/convert/Makefile
---------------------
2015/06/15
Add private code for ILCR laboratory registry
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2015/06/15
Factor out creation of new attribute and add list postprocessing emthod to allow subclasses to add private attributes
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/06/23
Add known safe GE private DBT data elements (000802)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2015/06/23
Add DBT test target for MammoImageViewer
com/pixelmed/display/Makefile
---------------------
2015/06/26
Factor out common attribute generation for conversion classes
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
---------------------
2015/06/26
Correct NIfTI conversion of mm and micron units for spacing and thickness (000803)
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2015/06/26
Manually set characteristics of prostate parametric map example
com/pixelmed/convert/Makefile
---------------------
2015/06/26
Populate Dimensions Module and indices with StackID and InStackPositionNumber using NRRD spatial volume and slice within spatial volume
com/pixelmed/convert/NRRDToDicom.java
---------------------
2015/06/30
Detect ambiguous content items, i.e., content items that match multiple rows in the same template or different rows in different templates, and warn about them even though they are likely not errors in the encoded instance but the template design (000804)
com/pixelmed/validate/CheckSRContentItemsUsed.xsl
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomSRValidator.java
---------------------
2015/06/30
Encode CT Acquisition Type before rather than after Irradiation Event UID in RDSR (000805)
com/pixelmed/dose/CTDoseAcquisition.java
---------------------
2015/06/30
Attempt to check ordering of content items within the same template (does not yet handle non-numeric row numbers), and does not check ordering across template invocations, i.e., is based on immediate predecessor being an actual content item entry in a template, and does not yet check if order is deemed significant in the template definition (000806)
com/pixelmed/validate/CheckSRContentItemsUsed.xsl
---------------------
2015/06/30
Begin work on disambiguating content items when concept name is a CID rather than a single code; handle filtering of match list as it is iterated through, but not VM calculations yet due to difficulty filtering a node-set declaratively in XSLT 1.0 (000807)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/07/01
Increase max heap size
DicomSRValidator.sh
---------------------
2015/07/01
Check explicitly encoded template ID in top level container matches template (000808)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2015/07/03
Update hsqldb to 2.3.3
README
lib/additional/hsqldb.jar
---------------------
2015/07/04
Increase memory and do not stop on excessive garbage collection
DicomSRValidator.sh
---------------------
2015/07/04
Add ability to insert empty code sequence (000813)
com/pixelmed/apps/Makefile
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/07/04
Add coding scheme identification for 99IPCMR
com/pixelmed/dicom/CodingSchemeIdentification.java
---------------------
2015/07/04
Fix validator complaint about item multiplicity for 2C PatientBreedCodeSequence and correct name of BreedRegistrationSequence (no leading Patient...) (000814)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2015/07/04
Synchronize common, CT and MR image/frame type values 3 and 4 with current lists in 2015c (includes values from Sup 117, CPs 1278, 1332)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2015/07/05
Do not add HU if not CT for RescaleType (000815) and use Units for PET for RescaleType if latter is absent or empty (000816)
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2015/07/05
Add ability to insert generic sequence content to top level data set, recursively (000818)
com/pixelmed/apps/Makefile
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/07/07
Switch to using AttributeList instead of Map<AttributeTag,String> when extracting and comparing FrameSet distinguishing, shared and pre-frame attributes, and then include SequenceAttributes (which previously being excluded and not copied at all), though still using string matching (including limited precision to account for floating point jitter) for comparison of all attributes, including SequenceAttributes (000817); this allows, for example, recognition of commonality and copying of shared Radiopharmaceutical Information Sequence into shared unassigned list
com/pixelmed/dicom/FrameSet.java
---------------------
2015/07/07
Add private code for Panitumumab ^89^Zr
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2015/07/07
Tidy up javadoc
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2015/07/08
Do not attempt to parse UN known safe SQ as SQ if explicit VR and unable to rewind input stream since otherwise fails to parse nested implicit VR encoding correctly (000819)
com/pixelmed/convert/Makefile
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
---------------------
2015/07/09
Add private code for Source images resampled to precision of segmentation
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2015/07/11
Accept files to set characteristics even if compressed, do not decompress pixel data, and write in same TransferSyntax as read
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/07/11
Add ability to remove named attributes, and options to control addition to ContributingEquipmentSequence and replacement of CodingSchemeIdentificationSequence
com/pixelmed/apps/Makefile
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/07/11
Allow data elements to be specified by group and element number, not only keyword
com/pixelmed/apps/Makefile
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2015/07/12
Add control over addition of ContributingEquipmentSequence during DeidentifyAndRedact since its presence freaks out Philips QLAB (000821)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/Makefile
---------------------
2015/07/12
Add Philips 3D US private data elements to known safe list (000822)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2015/07/12
Remove ReviewerName during de-identification (000823)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2015/07/12
Add more Philips 3D US private data elements to known safe list (000822)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2015/07/13
Yet more Philips 3D US private data elements added to known safe list (000822)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2015/07/13
Yet more Philips 3D US private data elements added to known safe list (000822)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2015/07/15
Add options to control checking for amiguous templates, out of order content items and encoded template ID matches expected template ID, and turn them off by default
com/pixelmed/validate/CheckSRContentItemsUsed.xsl
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/DicomSRValidator.java
lib/additional/pixelmed_codec.jar
---------------------
2015/07/17
Remove -XX:+UseCompressedString that causes recent JREs to fail to start and various other spurious options in text make targets
com/pixelmed/apps/Makefile
---------------------
2015/07/17
Add station name to HTML output of CTDose (000828)
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCTDose.java
---------------------
2015/07/17
Handle tab before phantom type letter in Siemens screen (000829)
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2015/07/22
Add more DICONDE data elements (E2339 update)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/07/28
Add ContourData to list elements to exclude from maximum explicit VR value length sanity check
com/pixelmed/dicom/AttributeList.java
---------------------
2015/07/28
Add script file that is included in distribution
DicomAttributeBrowser.sh
---------------------
2015/07/30
Restore YBR color conversion for RLE that was broken when refactoring to support deferred JPEG decompression (000832)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/Makefile
---------------------
2015/07/30
Make default to add ContributingEquipmentSequence consistent and document it in javadoc
com/pixelmed/apps/DeidentifyAndRedact.java
---------------------
2015/07/31
Allow for floating point jitter in distinguishing attributes, specifically ImageOrientationPatient, since was broken by switch to using AttributeList instead of Map<AttributeTag,String> that used AttributeList.equals(); shared list comparisons were already accounting for it (000839)
com/pixelmed/dicom/FrameSet.java
---------------------
2015/08/01
Update links to where to get JIIO codecs since no longer at download.java.net and need to go to Internet Archive
README
---------------------
2015/08/03
Update status bar values when frame changes but cursor not moved since transformation may differ per frame (000840)
com/pixelmed/display/SingleImagePanel.java
---------------------
2015/08/06
Add more Mammo CAD context groups, especially for composite features (000842)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/NOTES
---------------------
2015/08/06
Correct VM of inclusion of TID 4006 from TID 4004 - should be 1-n not 1 (000842)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/08/09
Increase heap and stack size for all OCR tests
com/pixelmed/doseocr/Makefile
---------------------
2015/08/09
Move SiemensAndToshiba_20150629 test source from DoseSR to DoseImages
com/pixelmed/doseocr/Makefile
---------------------
2015/08/09
Add Toshiba OCR pattern for CTDIvol DLP +/- SD
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2015/08/09
Do not skip VL bytes twice when encountering value with VL that does not match VR (000843)
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
---------------------
2015/08/09
Update OCR regression tests with comparison with saved with and without content item identifiers, and change several test cases
com/pixelmed/doseocr/Makefile
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dciodvfy.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dciodvfy.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.build.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.build.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log
testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2015/08/09
Add CommentsOnRadiationDose to common attribute list in order to expose DLP values in text that are not in ExposureDoseSequence for GE images
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2015/08/09
Tidy up javadoc
com/pixelmed/display/SingleImagePanel.java
---------------------
2015/08/21
Improve javadoc about getBufferedImage
com/pixelmed/display/SourceImage.java
---------------------
2015/08/24
To minimize contiguous memory use that causes heap exhaustion for image with very large numbers of frames, use per-frame memory mapped buffers rather than single large contiguous array, use memory mapped short buffers when 8 bit images encoded as OW, add ability to get and use per-frame short arrays rather than single large contiguous array when not memory mapped
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/display/SourceImage.java
---------------------
2015/08/24
When blacking out, to minimize contiguous memory use that causes heap exhaustion for image with very large numbers of frames, use per-frame byte arrays
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2015/08/24
Turn off debugging comments
com/pixelmed/display/SourceImage.java
---------------------
2015/08/25
Handle per-frame arrays returned from ImageEditUtilities.blackout() for single channel, not just RGB, images
com/pixelmed/display/SourceImage.java
---------------------
2015/08/26
Correct parsing of UN VR Sequences by passing parameter to force treatment as implicit VR little endian, rather than depending on detecting supposedly incorrect (but actually correct) implicit VR pattern per data element, which fails if value length happens to be zero; also eliminates dependence on input stream being buffered to allow rewinding (000845)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
---------------------
2015/08/26
Update copyright notice to 2015
COPYRIGHT
NOTES.updatecopyright
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/anatproc/package.html
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/apps/package.html
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/package.html
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/database/package.html
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/SOPInstanceReference.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/package.html
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/package.html
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/TaskChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
com/pixelmed/display/event/package.html
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/displaywave/package.html
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/dose/package.html
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/package.html
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/SelfRegisteringListener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/ftp/package.html
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/geometry/package.html
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/RequestCommandMessage.java
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/network/package.html
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
com/pixelmed/query/package.html
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/scpecg/package.html
com/pixelmed/server/package.html
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestCodingScheme_AllTests.java
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
com/pixelmed/test/TestLaterality.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSourceOfDoseInformation.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
com/pixelmed/test/UserInterfaceUtilities.java
com/pixelmed/test/package.html
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/MessageLogger.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/ThreadUtilities.java
com/pixelmed/utils/package.html
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/validate/package.html
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/package.html
---------------------
2015/08/26
Type in comment
com/pixelmed/display/DicomImageBlackout.java
---------------------
2015/08/27
Verbose errors during compilation to shiw location where incorrect return type is specified
Makefile.common.mk
---------------------
2015/08/27
Report more specific error than null pointer exception when SOP Class UID is missing when loading file (000849)
com/pixelmed/display/DicomImageViewer.java
---------------------
2015/08/27
Update path to classes and test files in image display test
com/pixelmed/display/Makefile
---------------------
2015/08/27
Report actual VR when incorrect short Value Length form detected in explicit VR (000850)
com/pixelmed/dicom/AttributeList.java
---------------------
2015/08/27
Recognize old private GE CT and MR image SOP Classes (000852)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2015/08/27
Lower threshold to leave bulk attribute values on disk and memory map them instead
com/pixelmed/dicom/AttributeFactory.java
---------------------
2015/08/27
Extend deferral of per-frame decompression to JPEG lossless, not just JPEG baseline, do not make copy of decompressed BufferedImage unless it is 8 bit and more than one channel, and reorganize Source image to generalize handling of all sources of 8 and 16 bit grayscale data whether byte or short per frame buffers, byte or short per-frame or contiguously allocated memory, or compressed frames with deferred decompression (000848)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/SourceImage.java
---------------------
2015/08/27
Do not need to reconstruct SourceImage after blackout twice
com/pixelmed/display/DicomImageBlackout.java
---------------------
2015/08/27
Trace offset when memory mapping disk files
com/pixelmed/display/SourceImage.java
---------------------
2015/08/27
Add mechanism to mark files on disk backing OtherAttributeOnDisk as temporary (to be deleted), and add utility thread to delete them in the background when able, once the OtherAttributeOnDisk attribute that references them is no longer needed
com/pixelmed/utils/FileReaper.java
---------------------
2015/08/27
Add mechanism to mark files on disk backing OtherAttributeOnDisk as temporary (to be deleted), and add utility thread to delete them in the background when able, once the OtherAttributeOnDisk attribute that references them is no longer needed
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/utils/FileReaper.java
com/pixelmed/utils/Makefile
---------------------
2015/08/27
Use single large temporary file for pixel data result of blackout operation, to reduce heap use when above a threshold size
com/pixelmed/display/ImageEditUtilities.java
---------------------
2015/08/28
Use multiple (per-frame) temporary files for pixel data result of blackout operation, to reduce heap use when above a threshold size and deal with memory mapping failures when single temporary file too large, and extend SourceImage to handle this pattern, conventionally reading into per-frame arrays on demand, rather than memory mapping small per frame files (too many of which seem to stress out JRE on Windows)
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SourceImage.java
---------------------
2015/08/28
Generalize ability to retrieve all frames or selective frame from other attribute left on disk, to use, e.g., if memory mapping fails, rather than resorting to reteiving entire value as a contiguous array
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
---------------------
2015/08/28
Add control over memory mapping and use per-frame rather than contiguous arrays whenever possible if memory mapping fails or is disabled, and when extracting byte arrays from OW short contiguos array, create per-frame arrays instead of contiguous arrays
com/pixelmed/display/SourceImage.java
---------------------
2015/08/28
Add control over whether to never leave on disk, always leave on disk, or use threshold
com/pixelmed/dicom/AttributeFactory.java
---------------------
2015/08/28
Increase heap size
DeidentifyAndRedact.sh
---------------------
2015/08/28
Add programatic control of whether or not to use memory mapping when constructing SourceImage, and disable it on Windows for DeidentifyAndRedact, since it causes memory allocation issues after mapping fails despite heap being relatively spacious (presumably some native memory allocation issue)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/display/SourceImage.java
---------------------
2015/08/28
Add a mechanism to get a listed of files that failed to be deidentified and redacted (000854)
com/pixelmed/apps/DeidentifyAndRedact.java
---------------------
2015/08/28
Tidy up javadoc
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
---------------------
2015/08/28
Comment out debugging messages at per-frame level and related to finalization
com/pixelmed/display/SourceImage.java
---------------------
2015/08/28
Turn off debugging messages
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/utils/FileReaper.java
---------------------
2015/08/28
Rename method returning failures
com/pixelmed/apps/DeidentifyAndRedact.java
---------------------
2015/08/28
Swap sense of message about failure or disabled state of memory mapping to correct order
com/pixelmed/display/SourceImage.java
---------------------
2015/09/03
Activate debugging messages to track leave on disk
com/pixelmed/dicom/AttributeFactory.java
---------------------
2015/09/03
Activate debugging messages to track timing and start and end of blackout
com/pixelmed/display/ImageEditUtilities.java
---------------------
2015/09/03
Allow (and default to, if memory mapping inactive or fails) reading of per-frame data from a file to be deferred for byte data, including little-endian byte data explicitly encoded as OW
com/pixelmed/display/SourceImage.java
---------------------
2015/09/05
Improve javadoc
com/pixelmed/dicom/ImageLibrary.java
---------------------
2015/09/05
Add convenience method to getPositionInTreeToUseAsReferencedContentItemIdentifier()
com/pixelmed/dicom/ContentItem.java
---------------------
2015/09/05
Improve javadoc
com/pixelmed/dicom/ImageLibrary.java
---------------------
2015/09/05
Tidy up javadoc
com/pixelmed/dicom/ImageLibrary.java
---------------------
2015/09/07
Add ReferencedPatientPhotoSequence to composite instance context at patient level, and remove during de-identification (CP 1343)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CompositeInstanceContext.java
---------------------
2015/09/07
Update test file paths
com/pixelmed/dicom/Makefile
com/pixelmed/dose/Makefile
---------------------
2015/09/07
Include TimezoneOffsetFromUTC in created objects, as long as it is not different from any source objects that were used as a source of composite instance context that includes dates (e.g., Study Date), since those are not fixed up to match (000855)
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/Makefile
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
---------------------
2015/09/10
Add data elements assigned for CPs 1441, 1454 and 1461
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/09/10
Detect and handle Papyrus Implicit VR Transfer Syntax (000859)
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
---------------------
2015/09/10
Make sure an Iterator is returned even if there is no SOP Class UID to drive demographics layout (000860)
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
---------------------
2015/09/12
Fix 8 bit multi-frame images encoded in OW when read as contiguous short array, which was broken when refactoring SourceImage to allow deferred reads (etc.) since offset of start of each frame was not no longer being accounted for; fix it by refactoring extraction of byte values from short into two common utility methods, one for single frame short arrays and one for multi-frame contiguous short arrays; also use memory mapping control flag for >8 bit values from OW, allow deferred reads of those too, and if not deferring, read into per-frame rather than contiguous short arrays, and cleanup checking of little endian to defer to TransferSyntax method rather than checking UIDs against String values directly (000861)
com/pixelmed/display/SourceImage.java
---------------------
2015/09/12
Check OW is on disk before expecting it to be, and restore method to read it when it isn't
com/pixelmed/display/SourceImage.java
---------------------
2015/09/15
Add UIDs and data elements for Sup 156
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/09/15
Handle single channel <= 8 bit image left on disk but encoded as OW
com/pixelmed/display/SourceImage.java
---------------------
2015/09/15
Handle single channel <= 8 bit image left on disk but encoded as OW
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
---------------------
2015/09/17
Add CP 1458 Data Element Tags
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/09/17
Handle OtherByteAttributeMultipleFrameArrays for single channel 8 bit images; turn off debugging and reactivate memory mapping
com/pixelmed/display/SourceImage.java
---------------------
2015/09/17
Reactivate threshold for leaving attribute on disk
com/pixelmed/dicom/AttributeFactory.java
---------------------
2015/09/17
Add test target for subset
com/pixelmed/display/Makefile
---------------------
2015/09/17
Turn off debugging messages related to tracing SourceImage paths
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/utils/CapabilitiesAvailable.java
---------------------
2015/09/18
Add UIDs and data elements for Sup 181 (note that new OL VR is not yet supported by rest of code)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/09/18
Add support for OtherLongAttribute (OL) (Sup 181)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
com/pixelmed/test/TestBinaryAttribute_AllTests.java
---------------------
2015/09/28
Use Iterator rather than for loop to avoid ConcurrentModificationException when shared attribute not present in every frame (000871)
com/pixelmed/dicom/FrameSet.java
---------------------
2015/10/05
Reduce size of cross hair for centroid for CAD display in mammo viewer
com/pixelmed/display/MammoImageViewer.java
---------------------
2015/10/16
Add ability to search supplied directory for files to main() method of DicomDirectory when creating a DICOMDIR to handle case when command line supplied file list is too long for shell to handle
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/utils/FileUtilities.java
---------------------
2015/10/16
Speed up DICOMDIR creation from files by not reading Pixel Data for each files, which is not needed because we are not creating icons
com/pixelmed/dicom/DicomDirectory.java
---------------------
2015/10/16
Alternate way of iterating through list of files found in root directory of main() method
com/pixelmed/dicom/DicomDirectory.java
---------------------
2015/10/16
Improve JavaDoc and remove unnecessary assignment to unused variable of return value from getImageContentItem()
com/pixelmed/dicom/ImageLibrary.java
---------------------
2015/10/17
Use ImageIO.setUseCache(false) to prevent (slow) use of disk cache when decompressing
com/pixelmed/dicom/AttributeList.java
---------------------
2015/10/17
Handle reserved bytes incorrectly set to ASCII zero characters, not zero :) ! (000872)
com/pixelmed/dicom/AttributeList.java
---------------------
2015/10/18
Use ImageIO.setUseCache(false) to prevent (slow) use of disk cache when decompressing
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2015/10/18
Add pixelmed_imageio.jar file to use for pure Java lossless JPEG codec, supply it in place of pixelmed_codec.jar for redaction, since it includes it and use throughout display applications; also add test target that uses SingleImagePanel to display test images (faster than using viewer but sufficient), and prevent SingleImagePanel from attempting to display stuff that SourceImage cannot make a BufferedImage from, and add an isImage() method to SourceImage to signal that
DeidentifyAndRedact.bat
DeidentifyAndRedact.sh
DeidentifyAndRedactWithOriginalFileName.bat
DicomBrowser.sh
DicomCleanerAssumingJREInstalled.bat
DicomCleanerWithOwnJRE.bat
DicomImageBlackout.bat
DicomImageViewer.bat
DicomImageViewer.sh
DicomImageViewerWithCDJRE.bat
DicomImageViewerWithOwnJRE.bat
DoseUtilityAssumingJREInstalled.bat
DoseUtilityWithOwnJRE.bat
Makefile
Makefile.common.mk
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceImage.java
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2015/10/19
Choose PixelMed Lossless JPEG Reader in preference to others (esp. buggy JAI JIIO Native); factor out selectReaderFromCodecsAvailable() logic from Atttribute list into CompressedFrameDecoder and make it static and in doing so use reader.getOriginatingProvider().getXXX() calls in checks and messages everywhere rather than the caching that information all over the place; also factor out common scanForCodecs() logic into one place too
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2015/10/23
Correct null pointer exception when accessing byte data from shorts for selected frame (000873)
com/pixelmed/display/SourceImage.java
---------------------
2015/10/23
Factor out method to get 8 bit rendered BufferedImage for specified frame
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2015/11/03
Tidy up javadoc
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2015/11/03
Do not emit empty for-each statements if content item in template has no children; silences warning from Saxon (000876)
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
---------------------
2015/11/06
Do not attenpt to decompress if no compressed frame data supplied
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2015/11/06
Incomplete experiments with deferring not just decompression, but also unencapsulation - deactivated
com/pixelmed/dicom/AttributeList.java
---------------------
2015/11/14
Allow '-' to indicate not to store received files for testing, and some more performance metrics, and add some more test cases
com/pixelmed/network/Makefile
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/runprocessinbackground.sh
---------------------
2015/11/16
Data elements and SOP Class UIDs from Nove 2015 WG 6 WG 6 meeting final text
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/11/16
Data elements from Nov 2015 WG 6 meeting final text
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2015/11/20
Add SOP Classes for Sup 173 Wide Field Ophthalmic Photography
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2015/11/28
Restore returning single bit images as BufferedImage broken during refactoring to use BufferedImageSource for other image types (000879)
com/pixelmed/display/SourceImage.java
---------------------
2015/11/28
Add SOP Class Description to message about unused file
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2015/11/28
Fix synchronized scrolling that eventually fails due to weak reference in self-registration by keeping application scope variable around that references the listener (000880)
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/event/SelfRegisteringListener.java
---------------------
2015/12/05
Add constructor with File argument
com/pixelmed/display/SuperimposedDicomSegments.java
---------------------
2015/12/05
Debugging when geometry is missing; add method to notify if hit on non-zero superimposed segmentation from cursor location and use it from image panel
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SuperimposedImage.java
---------------------
2015/12/05
Add RLE decoding from AttributeList to CompressedFrameDecoder, which requires passing more information in the constructor, including width, height and number of samples per pixel (000787); check what codecs are loaded to determine CompressedFrameDecoder.canDecompress() and extend support to all available JPEG family codecs including those greater than 8 bits (000786); do not assume JPEG reader wanted when Transfer Syntax unrecognized in CompressedFrameDecoder.canDecompress() (000881)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2015/12/05
Add many frame lossless JPEG test image
com/pixelmed/display/Makefile
---------------------
2015/12/05
Defer frame decompression in DicomImageViewer if possible (000882)
com/pixelmed/display/DicomImageViewer.java
---------------------
2015/12/06
Populate Referenced and Derivation Image Macros (000883)
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2015/12/06
Small animal identification (CPs 1457, 1470, 1472, 1473, 1478)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2015/12/07
Add Radiopharmaceutical RDSR (Sup 159)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/12/09
Correct AttributeTag.isCurveGroup() to check correct group (000884)
com/pixelmed/dicom/AttributeTag.java
---------------------
2015/12/11
Correct wrong number of bytes per sample supplied for CompressedFrameDecoder constructor when byte not short (affects RLE decompression and manifests as incorrect segment offset) (000886)
com/pixelmed/display/Makefile
com/pixelmed/display/SourceImage.java
---------------------
2015/12/11
Defer frame decompression in ConsumerFormatImageMaker if possible (000887)
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2015/12/12
Look up group, element and VR in dictionary rather than requiring them in input XML (000888)
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2015/12/13
Improve disambiguation of content items when concept name is a CID rather than a single code, by filtering match list, which avoids spurious error reports about incorrect content item multiplicity and improves on previous partial fix (000807)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
---------------------
2015/12/13
Disambiguate inclusion of TID 300 via TID 1501 rather than TID 1410 or 1411 based on INFERRED FROM rather than CONTAINS relationship to IMAGE or SCOORD (000889)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/12/13
Add validation of small animal acquisition context (Sup 187)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/12/21
Fix isambiguation inclusion of TID 300 via TID 1501 rather than TID 1410 or 1411 based on INFERRED FROM rather than CONTAINS relationship to IMAGE or SCOORD and to be nested bewlo the NUM (000889)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2015/12/22
Update minimum version for JWS to 1.7 and document it, as well as update Safari and IE JWS usage
webstart/ConvertAmicasJPEG2000FilesetToDicom.html
webstart/DicomCleaner.html
webstart/DicomCleanerExperimental.html
webstart/DicomCleanerUsage.html
webstart/DicomImageBlackout.html
webstart/DicomImageViewer.html
webstart/DoseUtility.html
webstart/DoseUtilityUsage.html
webstart/DownloadOrTransmit.html
webstart/ECGViewer.html
webstart/MediaImporter.html
webstart/WatchFolderAndSend.html
---------------------
2016/01/01
Typo in javadoc
com/pixelmed/dicom/SOPClass.java
---------------------
2016/01/04
Add defined CIDs for modality and laterality in image library (CP 1468)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/01/04
Allow multiple items in the MR Receive Coil Sequence (CP 1480)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2016/01/10
Typo in toString output for concept
com/pixelmed/anatproc/CodedConcept.java
---------------------
2016/01/12
Do not attempt to build CompositeInstanceContext when non-DICOM image input file (000891)
com/pixelmed/doseocr/OCR.java
---------------------
2016/01/16
Update codec files to latest release with fix for JPEGLosslessImageReaderSpi.canDecodeInput() recognizing SOF3 not immediately following SOI (000893)
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2016/02/04
Add SLF4J based logging
ECGViewer.bat
ECGViewerWithCDJRE.bat
Makefile
Makefile.common.mk
MammoImageViewer.sh
NetworkMediaImporter.sh
README
our.com.pixelmed.display.DicomImageViewer.properties
sample.com.pixelmed.display.DicomImageViewer.properties
studyreceiver.properties
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/Makefile
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/apps/testdosereporter.properties
com/pixelmed/apps/teststudyreceiver.properties
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/EncapsulateCompressedPixelData.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/Makefile
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/Makefile
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/Makefile
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/Makefile
com/pixelmed/server/graymax.properties
com/pixelmed/server/testserver.properties
com/pixelmed/slf4j/Logger.java
com/pixelmed/slf4j/LoggerFactory.java
com/pixelmed/slf4j/Makefile
com/pixelmed/slf4j/package.html
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCleaner.properties
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/Syslog.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebServerApplicationProperties.java
lib/additional/slf4j-api-1.7.13.jar
lib/additional/slf4j-simple-1.7.13.jar
---------------------
2016/02/04
Update copyright notice in source files
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/anatproc/package.html
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/apps/package.html
com/pixelmed/convert/AnalyzeException.java
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/convert/package.html
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/database/package.html
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SOPInstanceReference.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UniversalResourceAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedCharactersAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/package.html
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/package.html
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/TaskChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
com/pixelmed/display/event/package.html
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/displaywave/package.html
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/dose/package.html
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/package.html
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/SelfRegisteringListener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/ftp/package.html
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/geometry/package.html
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/RequestCommandMessage.java
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/network/package.html
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/query/package.html
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/scpecg/package.html
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/package.html
com/pixelmed/slf4j/Logger.java
com/pixelmed/slf4j/LoggerFactory.java
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
com/pixelmed/test/TestBinaryAttribute_AllTests.java
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCodingScheme_AllTests.java
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
com/pixelmed/test/TestLaterality.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
com/pixelmed/test/TestSourceOfDoseInformation.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
com/pixelmed/test/UserInterfaceUtilities.java
com/pixelmed/test/package.html
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FileReaper.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/MessageLogger.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/ThreadUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/utils/package.html
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/validate/package.html
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/WebServerApplicationProperties.java
com/pixelmed/web/package.html
---------------------
2016/02/04
Update data dictionary (CPACK-84)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/02/04
Update webstart jar signing with new alias as well as adding timestamping option to assure validated of jar as of date of signature regardless of later certificate expiration
Makefile
---------------------
2016/02/05
Tidy up javadoc
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2016/02/10
Add data elements for settling phases information and Synch pulse for Functional MRI (CP 1476)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/02/17
Correct inconsistent data element names found making draft 2016a
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/02/18
Add test for existing method to get private attribute from list given tag and creator
com/pixelmed/test/Makefile
com/pixelmed/test/TestGetPrivateFromAttributeList.java
com/pixelmed/test/TestGetPrivate_AllTests.java
com/pixelmed/test/TestSafePrivate_AllTests.java
---------------------
2016/02/25
Private codes for prostate segments
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2016/02/29
Work around incomplete meta information header if GE PACS internal files by reading SOP Class from data set if absent in meta information but still using transfer syntax specified in meta information for data set (000905)
com/pixelmed/dicom/MediaImporter.java
---------------------
2016/04/02
Correct CID 6015 to match current 2016b standard, which incldues CP 1308 about F-01796 Mammography Breast Density
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2016/04/02
Update data dictionary to 2016b
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/04/02
Remove the previous signatures and add -digestalg SHA1 when signing jai jar files for web start, else error about expired certificates, per http://stackoverflow.com/questions/8176166/invalid-sha1-signature-file-digest; add verification step after each signature is applied
Makefile
---------------------
2016/04/04
Undo removal of Sun signatures from JIIO libraries for web start - resigning alone with the digest format specified seems to work, otherwise SPI won't load codecs
Makefile
---------------------
2016/04/11
Turn commented out println statements into slf4jlogger.trace calls
com/pixelmed/dicom/AttributeList.java
---------------------
2016/04/11
More slf4j trace calls and report byteoffset in decimal and hex
com/pixelmed/dicom/AttributeList.java
---------------------
2016/04/11
Handle nested sequences that are undefined length UN VR (000909)
com/pixelmed/dicom/AttributeList.java
---------------------
2016/04/24
Fix typo
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2016/04/24
Work around Oracle bug related to JFIF header but components not numbered from 1 throwing inconsistent metadata exception in readAll(), by using read() instead, which means won't have metadata, but aren't using it anyway (000911)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2016/04/26
Add ability to customize path to instance files in completed study (000913) and respond to specific events for user interface logging (000914)
com/pixelmed/apps/StudyReceiver.java
---------------------
2016/04/26
Add ability to customize path to instance files in completed study (000913) and respond to specific events for user interface logging (000914)
com/pixelmed/apps/StudyReceiver.java
---------------------
2016/05/06
Update CID 7454 now called AnimalTaxonomicRankValues to 20060822
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2016/05/06
Add some private codes to handle transplant exogenous source strain and transgene
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2016/05/09
Add ability to restart StudyReceiver DICOM listener after configuration change (000915)
com/pixelmed/apps/StudyReceiver.java
---------------------
2016/05/09
Correct javadoc
com/pixelmed/apps/StudyReceiver.java
---------------------
2016/05/09
Reprocess studies with instances received after study already processed (000916)
com/pixelmed/apps/StudyReceiver.java
---------------------
2016/05/11
Do not include duplicates in source archive tar files, and use hard-dereference with gnutar in case we do, to avoid freaking out bsdtar on extraction (000918)
Makefile
com/pixelmed/display/Makefile
---------------------
2016/05/15
Propagate appropriate isSignedPixelRepresentation into sequence items to allow determination of signed dependent VR of US/SS for nested elements when reading AttributeList or copying DicomStream (000919)
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
---------------------
2016/05/15
Add support to SynchronizeFromRemoteSCP for any transfer syntax, by extending use of compressionLevel when creating PresentationContexts and letting SCP decide to avoid risk of exceeding maximum number (000920)
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2016/05/16
Allow ourChoice (propose one presentation context for each abstract/transfer syntax combo when doing C_GET, otherwise SCP may not choose compressed if all TS in one context (000920) (000922)
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
---------------------
2016/05/16
To be overridden, renameFileWithHierarchicalPathFromAttributes needs to be non-static. Duh!
com/pixelmed/apps/StudyReceiver.java
---------------------
2016/05/25
Data elements for CP 1013 and 1539
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/05/26
Add a command line tool to convert UUIDs to X.667 OIDs and back (000923)
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2016/05/30
Fix null pointer exception from debugging message in CTAnatomy using DoseUtility (000924)
com/pixelmed/anatproc/CTAnatomy.java
---------------------
2016/05/30
Add more German anatomy for head and neck in CTAnatomy for DoseUtility (000925)
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/apps/Makefile
---------------------
2016/06/06
tidy up javadoc
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2016/06/10
Do not fail on exceding GC limit during testing
com/pixelmed/doseocr/Makefile
---------------------
2016/06/10
Add missing language of content item and descendants to RDSR templates for validation (CP 1560)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/06/10
Add Cone Beam CT Acquisition Type to validator and class (CP 1515)
com/pixelmed/dose/CTScanType.java
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2016/06/10
Update language coding scheme to RFC5646 (CP 1567)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2016/06/10
Allocate more heap for validation tests
com/pixelmed/doseocr/Makefile
---------------------
2016/06/10
Add TID 1204 Language of Content Item and Descendants to RDSRs created from CTDose (000927)
com/pixelmed/dose/CTDose.java
com/pixelmed/test/TestCTDose.java
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.build.log
testresults/testocracquiredimagesfindscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.build.log
testresults/testocracquiredimagessiemensdcmsroutput/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputheadandbodyphantomonepageonly/dosesrfile.dcm.dcsrdump.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.DicomSRValidator.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.build.log
testresults/testocracquiredimagestoshibadcmsroutputnophantom/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesandexposuredosesequence/dosesrfile.dcm.dcsrdump.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.build.log
testresults/testocrgeacquiredimagesbodyandheaddifferentphantomsamestudyheaddosechanginginsameacquisition/dosesrfile.dcm.dcsrdump.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.build.log
testresults/testocrgenoacquiredimagesexposuredosesequenceinscreen/dosesrfile.dcm.dcsrdump.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.DicomSRValidator.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.build.log
testresults/testocrgescreenandexposuredosesequencecardiachelicalstationaryaxialambiguity/dosesrfile.dcm.dcsrdump.log
testresults/testphilipsonedcm/dosesrfile.dcm.DicomSRValidator.log
testresults/testphilipsonedcm/dosesrfile.dcm.build.log
testresults/testphilipsonedcm/dosesrfile.dcm.dcsrdump.log
---------------------
2016/06/10
Update JRE for windows executables to jre1.8.0_91
windows/Makefile
windows/jre1.8.0_51-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip(DEAD)
windows/jre1.8.0_91-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip
---------------------
2016/06/21
tidy up tests of decompress
com/pixelmed/apps/Makefile
---------------------
2016/07/05
Add test for read and write UT that is Base64 AES string
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
com/pixelmed/test/TestAttributeList_AllTests.java
---------------------
2016/07/05
Add class that applies J2K reversible compression
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2016/07/05
Supress debugging message; update more paths to local test copy of medical.nema.org test data sets
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
---------------------
2016/07/20
Update test file path
com/pixelmed/apps/Makefile
---------------------
2016/07/20
Update debugging messages
com/pixelmed/display/ConsumerFormatImageMaker.java
---------------------
2016/07/21
Add test that dciodvfy does not require PatientOrientation for Parametric Map created from NRRD file
com/pixelmed/convert/Makefile
---------------------
2016/07/29
Add private storage SOP Classes for Agfa (basic attribute PS aka. change context) and Dcm4che (upgraded CT, MR, PET, encap doc)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2016/07/29
Add Medical Insight Private 3D Softcopy Presentation State Storage SOP Class
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2016/08/12
Use slf4j for debugging messages
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/display/SourceImage.java
---------------------
2016/08/12
Document that deferred decompression during AttributeList read requires that TransferSyntaxUID not be removed from AttributeList if classes that perform deferred decompression depend on it
com/pixelmed/dicom/AttributeList.java
com/pixelmed/display/SourceImage.java
---------------------
2016/08/12
Defer decompression of compressed files being recompressed (000930)
com/pixelmed/apps/CompressDicomFiles.java
---------------------
2016/08/15
Add SequenceItem type parameter to Iterator method and itemList variable
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2016/08/15
Add document title in order to match TID 8101 - Acquisition Context SOP Class alone is not sufficient to trigger template detection
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/08/17
Add recursive removal of tag to AttributeList and SetCharacteristicsFromSummary
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/dicom/AttributeList.java
---------------------
2016/08/17
Add truncation rather scaling option for integer conversion; create PixelValueTransformationFunctionalGroup if required rather than top level rescale attributes; insert full scale window
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
---------------------
2016/08/17
create unassigned groups, even if empty and even if not used by SOP Class (e.g., paramateric map)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
---------------------
2016/08/17
Clean up brain atlas conversion grayscale images to create valid parametric map (float) and legacy converted MR (integer) instances
com/pixelmed/convert/Makefile
---------------------
2016/08/17
Correct code meaning for (121232,DCM,"Source series for segmentation") (000931) (CP 1469)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/08/20
Correct logging parameter values when exception occurs (000932)
com/pixelmed/apps/CompressDicomFiles.java
---------------------
2016/08/21
Read test file into memory first if only one and it fits
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
---------------------
2016/08/21
Change some network logging messages from TRACE to DEBUG level
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2016/08/22
Add properties and GUI control over network parameters that affect performance, TCP send and receive buffer sizes and Maximum Length of PDU, separately for initiators and acceptors, in order to allow user to tune when performance is not as expected, and deploy in DicomCleaner (000933)
com/pixelmed/display/DicomCleaner.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2016/08/24
Fix slower than expected operation of sending and receiving C-STORE caused by calls to HexDump on every packet due to failure to use trace predicate when converting logging framework (000934)
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/utils/HexDump.java
---------------------
2016/08/24
Add properties and GUI control over network parameters that affect performance, TCP send and receive buffer sizes and Maximum Length of PDU, separately for initiators and acceptors, in order to allow user to tune when performance is not as expected, and deploy in DicomCleaner (000933)
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/server/DicomAndWebStorageServer.java
---------------------
2016/08/25
Add properties control over user query/retrieve panel, buttons and key text fields (000942)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/25
Factor out method to get boolean property with default that is saved, and automatically re-save properties on exit from DicomCleaner (allows default values to be written to file, perhaps for editing)
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/25
Store properties in alphabetical order (000944)
com/pixelmed/display/ApplicationFrame.java
---------------------
2016/08/25
Add properties control over presence of selected checkboxes (000943)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/25
Remember check box selections and replacement text field values between invocations by storing them in properties file (000703)
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/25
Add control over network Configure button presence (000942)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/25
Update names of properties to be more readable and document them in class javadoc (000942)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/26
Add more known safe GE mammo private data elements
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2016/08/26
Add more known safe GE mammo private data elements
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2016/08/26
Change debuging level to trace
com/pixelmed/dicom/SpecificCharacterSet.java
---------------------
2016/08/26
Import at startup from file or folder specified on command line (000945)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/08/26
Use temporary file(s) when blacking out large multi-frame 16 bit files, in the same way as was already done for 8 bit files (000946)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherWordAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherWordAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SourceImage.java
---------------------
2016/08/26
Correct VL calculation to be in bytes not words
com/pixelmed/dicom/OtherWordAttributeMultipleFrameArrays.java
---------------------
2016/08/26
Add legacy constructor without filename for existing test classes
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
---------------------
2016/08/26
Convert to slf4jlogger debugging calls
com/pixelmed/display/SourceImage.java
---------------------
2016/08/28
Use half of maxMemory rather than fixed threshold to determine when to use temporary file rather than allocating memory for blacked out frames
com/pixelmed/display/ImageEditUtilities.java
---------------------
2016/08/28
Handle display and blackout of > 2GB pixel data (000728)
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SourceImage.java
---------------------
2016/08/28
Do not use BufferedOutputStream when writing entire frames to temporary files
com/pixelmed/display/ImageEditUtilities.java
---------------------
2016/08/28
More timing
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
---------------------
2016/08/29
Correct error in code meanings of image library position and orientation (000947)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/08/30
Add static convenience method to get single string value from named attribute within single item of sequence attribute and refactor getMeaningOfCodedSequenceXXX() to use it
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCodedSequenceItemGetCodeMeaning.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
---------------------
2016/08/30
Extend test to include other attributes required in OriginalAttributesSequence
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
---------------------
2016/08/31
Import at startup from file or folder specified on command line (000945)
DicomCleaner.sh
---------------------
2016/09/05
Add CT Protocol Storage data elements (Sup 121)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/09/07
Update icon generation, replace DicomCleaner washing machine with public domain image (000948), add 1024 icons for MacOS (000949)
Makefile
---------------------
2016/09/07
Use reflection to set J2K codec writeparams so as not to require jai_imageio.jar at compile time (000950)
com/pixelmed/apps/CompressDicomFiles.java
---------------------
2016/09/07
Allow recording of time stamp in dialog logger modelled on slf4j parameters and provide properties to control it (000951)
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomCleaner.java
---------------------
2016/09/07
webstart/icons/ConvertAmicasJPEG2000FilesetToDicom.png
webstart/icons/DicomCleaner.png
webstart/icons/DicomImageBlackout.png
webstart/icons/DicomImageViewer.png
webstart/icons/MediaImporter.png
---------------------
2016/09/08
Add UDI data elements (CP 1418)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/09/28
Report exception locally if memory mapping fails; use long calculation of frame offset to prevent accessing wrong bytes if very large image (000952)
com/pixelmed/display/SourceImage.java
---------------------
2016/09/28
Correct slf4j exception caused by too few arguments in formatted string (000953)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/09/28
Disable memory mapping on Windows for blackout
com/pixelmed/display/DicomImageBlackout.java
---------------------
2016/09/29
Update data dictionary for release of 2016d
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/10/08
Add more GE safe private mammo data elements
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2016/10/14
Add ability to generate random name and ID and accession number values when cleaning, with zero padded strings, the length of which are controlled by new properties (000958)
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/utils/StringUtilities.java
---------------------
2016/10/14
Use property to control random patient name prefix and use default from resource bundle to allow internationalization of it
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_ja.properties
---------------------
2016/10/14
Tidy up javadoc
com/pixelmed/display/DicomCleaner.java
---------------------
2016/10/15
Correct class reported by slf4jlogger (000959)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/10/15
Do not merge images with different ProtocolName values (000962)
com/pixelmed/dicom/FrameSet.java
---------------------
2016/10/16
Extend compressor to support JPEG lossless and JPEG-LS if codecs available (000878); also suppress memory mapping on Windows for SourceImage for compressor
CompressDicomFiles.bat
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2016/10/16
Change from RGB Photometric Interpretation only if codec performs color space transformation (i.e., J2K only at this time)
com/pixelmed/apps/CompressDicomFiles.java
---------------------
2016/10/17
Document that Apache Commons Compress bzip2 codecs have changed to insert/expect the BZ prefix, and update tests to check for interoperability with dicom3tools dcbzip2 and dcunbzip2 whose behavior has been updated accordingly (000964)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/Makefile
---------------------
2016/10/17
Correct wrong Transfer Syntax constant in is OK to import test that is preventing importation of PixelMedBzip2ExplicitVRLittleEndian (000965)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/10/21
Add option to re-use original base file name (000966)
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2016/10/28
Add conversion of UTF-8 locale resources to ISO-8859-1 with native2ascii in common Makefile and test with German
Makefile.common.mk
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/Makefile
---------------------
2016/11/05
Correct Pulse Sequence Name in MR Image Library (CP 1578)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/11/06
Add Content Labels for Raw Data (CP 1595)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2016/11/06
Allow multiple finding sites for single regions of interest in measurement templates and segmentations (CP 1591)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2016/11/06
Update dictionary for CPACK 88
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/11/06
Clarify Segmentation Algorithm Parameters (CP 1597)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2016/11/06
Check PixelMeasures macro in SEG even if derived (000968); add Spacing Between Slices to Pixel Measures (CP 1427); add SEG conditions to PixelSpacing and SliceThickness in PixelMeasures, Poistion, Orientation macros (CP 1426)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2016/11/07
Update javadoc to correct class level example of parameters and document some protected variables
com/pixelmed/apps/MultiModalitySimulator.java
---------------------
2016/11/11
Add test case for Japanese locale using command line arguments
com/pixelmed/display/Makefile
---------------------
2016/11/11
Country is JP not JA
com/pixelmed/display/Makefile
---------------------
2016/11/13
Extend localization with resource bundles to all classes used by DicomCleaner, including network settings and image blackout, and use German as test
Makefile
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageBlackout.properties
com/pixelmed/display/DicomImageBlackout_de.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_de.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_de.utf-8_properties
---------------------
2016/11/13
Extend localization with resource bundles to all classes used by DicomCleaner, including network settings and image blackout, and use German as test
com/pixelmed/network/Makefile
---------------------
2016/11/14
Extend ja locale to include blackout and network properties, and switch to converting from UTF-8 dynamically
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomImageBlackout_ja.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_ja.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_ja.utf-8_properties
---------------------
2016/11/14
Create script to automate creation of localization files
insertlocalizationforDicomCleaner.sh
---------------------
2016/11/14
Add Danish localization
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomImageBlackout_da.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_da.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_da.utf-8_properties
---------------------
2016/11/14
Add status bar help text to localization strings
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageBlackout.properties
com/pixelmed/display/DicomImageBlackout_da.utf-8_properties
com/pixelmed/display/DicomImageBlackout_de.utf-8_properties
com/pixelmed/display/DicomImageBlackout_ja.utf-8_properties
---------------------
2016/11/14
Add Spanish localization
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomImageBlackout_es.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_es.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_es.utf-8_properties
---------------------
2016/11/14
Add Finnish localization
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomImageBlackout_fi.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_fi.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_fi.utf-8_properties
---------------------
2016/11/14
Add French localization
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomImageBlackout_fr.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_fr.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_fr.utf-8_properties
---------------------
2016/11/15
Add Italian localization
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomImageBlackout_it.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_it.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_it.utf-8_properties
---------------------
2016/11/15
Add localization archive target
Makefile
---------------------
2016/11/15
Update context groups with system calculated and X-Ray reading device not completely updated when CP 1077 incorporated (CP 1077)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2016/11/15
Add missing first two rows of TID 10004, update TID 10001 row 14, TID 10004 Row 6 and 8 with conditions for RDSR From MPPS Without Exposure Dose Sequence for Projection Radiography (CP 1318)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2016/11/21
Retain known safe Siemens Ultrasound private raw data elements and do not remove/remap those UID VR elements that are not transient UIDs, adding mechanism to detect these to UniqueIdentifierAttribute.isTransient() (000970)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestSafePrivateSiemensUltrasoundRawDataRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
---------------------
2016/11/21
Do not remap/remove Creator-Version UID during de-identification (000971)
com/pixelmed/dicom/UniqueIdentifierAttribute.java
---------------------
2016/11/23
Correct VR of View Orientation Modifier, Component Type Code Sequence to SQ and name of View Orientation Modifier Code Sequence (were wrong in Sup 131)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2016/11/23
Update DicomCleaner usage to describe which actions are controlled by Remove all unreplaced identities
webstart/DicomCleanerUsage.html
---------------------
2016/11/23
Improve HTML5 validity
webstart/DicomCleanerUsage.html
---------------------
2016/11/23
Remove InstitutionCodeSequence during de-identification (000973)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
---------------------
2016/11/24
Use SDL localizations
DicomCleanerAssumingJREInstalled_TestAllLocalizations.bat
README
com/pixelmed/display/DicomCleaner_cs.utf-8_properties
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_el.utf-8_properties
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomCleaner_hu.utf-8_properties
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomCleaner_ko.utf-8_properties
com/pixelmed/display/DicomCleaner_nl.utf-8_properties
com/pixelmed/display/DicomCleaner_no.utf-8_properties
com/pixelmed/display/DicomCleaner_pl.utf-8_properties
com/pixelmed/display/DicomCleaner_pt.utf-8_properties
com/pixelmed/display/DicomCleaner_ru.utf-8_properties
com/pixelmed/display/DicomCleaner_sv.utf-8_properties
com/pixelmed/display/DicomCleaner_tr.utf-8_properties
com/pixelmed/display/DicomCleaner_zh_CN.utf-8_properties
com/pixelmed/display/DicomImageBlackout_cs.utf-8_properties
com/pixelmed/display/DicomImageBlackout_da.utf-8_properties
com/pixelmed/display/DicomImageBlackout_de.utf-8_properties
com/pixelmed/display/DicomImageBlackout_el.utf-8_properties
com/pixelmed/display/DicomImageBlackout_es.utf-8_properties
com/pixelmed/display/DicomImageBlackout_fi.utf-8_properties
com/pixelmed/display/DicomImageBlackout_fr.utf-8_properties
com/pixelmed/display/DicomImageBlackout_hu.utf-8_properties
com/pixelmed/display/DicomImageBlackout_it.utf-8_properties
com/pixelmed/display/DicomImageBlackout_ja.utf-8_properties
com/pixelmed/display/DicomImageBlackout_ko.utf-8_properties
com/pixelmed/display/DicomImageBlackout_nl.utf-8_properties
com/pixelmed/display/DicomImageBlackout_no.utf-8_properties
com/pixelmed/display/DicomImageBlackout_pl.utf-8_properties
com/pixelmed/display/DicomImageBlackout_pt.utf-8_properties
com/pixelmed/display/DicomImageBlackout_ru.utf-8_properties
com/pixelmed/display/DicomImageBlackout_sv.utf-8_properties
com/pixelmed/display/DicomImageBlackout_tr.utf-8_properties
com/pixelmed/display/DicomImageBlackout_zh_CN.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/network/ApplicationEntityConfigurationDialog_cs.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_da.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_de.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_el.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_es.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_fi.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_fr.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_hu.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_it.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_ja.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_ko.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_nl.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_no.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_pl.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_pt.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_ru.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_sv.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_tr.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_zh_CN.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_cs.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_da.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_de.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_el.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_es.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_fi.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_fr.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_hu.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_it.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_ja.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_ko.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_nl.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_no.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_pl.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_pt.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_ru.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_sv.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_tr.utf-8_properties
com/pixelmed/network/NetworkApplicationConfigurationDialog_zh_CN.utf-8_properties
---------------------
2016/11/29
Updated localization files with DicomCleaner name translated, etc.
com/pixelmed/display/DicomCleaner_cs.utf-8_properties
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_el.utf-8_properties
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomCleaner_hu.utf-8_properties
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomCleaner_ko.utf-8_properties
com/pixelmed/display/DicomCleaner_nl.utf-8_properties
com/pixelmed/display/DicomCleaner_no.utf-8_properties
com/pixelmed/display/DicomCleaner_pl.utf-8_properties
com/pixelmed/display/DicomCleaner_pt.utf-8_properties
com/pixelmed/display/DicomCleaner_ru.utf-8_properties
com/pixelmed/display/DicomCleaner_sv.utf-8_properties
com/pixelmed/display/DicomCleaner_tr.utf-8_properties
com/pixelmed/display/DicomCleaner_zh_CN.utf-8_properties
com/pixelmed/display/DicomImageBlackout_el.utf-8_properties
com/pixelmed/display/DicomImageBlackout_es.utf-8_properties
com/pixelmed/display/DicomImageBlackout_sv.utf-8_properties
com/pixelmed/display/DicomImageBlackout_tr.utf-8_properties
com/pixelmed/display/DicomImageBlackout_zh_CN.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_ru.utf-8_properties
---------------------
2016/12/05
Useslf4j method with correct number of arguments for file exception
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/DecompressDicomFiles.java
---------------------
2016/12/05
Debug messages for YBR to RGB conversion
com/pixelmed/display/SingleImagePanel.java
---------------------
2016/12/05
Conversion from RLE to JPEG needs to change Planar Configuration from 1 to 0 (000977)
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
com/pixelmed/dicom/AttributeList.java
---------------------
2016/12/07
Create properties files to localize FileChooser
com/pixelmed/display/Makefile
com/pixelmed/display/NOTES_Localization.txt
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeFileChooser.properties
com/pixelmed/display/SafeFileChooser_cs.utf-8_properties
com/pixelmed/display/SafeFileChooser_da.utf-8_properties
com/pixelmed/display/SafeFileChooser_el.utf-8_properties
com/pixelmed/display/SafeFileChooser_fi.utf-8_properties
com/pixelmed/display/SafeFileChooser_hu.utf-8_properties
com/pixelmed/display/SafeFileChooser_nl.utf-8_properties
com/pixelmed/display/SafeFileChooser_no.utf-8_properties
com/pixelmed/display/SafeFileChooser_pl.utf-8_properties
com/pixelmed/display/SafeFileChooser_pt.utf-8_properties
com/pixelmed/display/SafeFileChooser_ru.utf-8_properties
com/pixelmed/display/SafeFileChooser_tr.utf-8_properties
---------------------
2016/12/08
Add localization support for Send and Query dialogs
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_cs.utf-8_properties
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_el.utf-8_properties
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomCleaner_hu.utf-8_properties
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomCleaner_ko.utf-8_properties
com/pixelmed/display/DicomCleaner_nl.utf-8_properties
com/pixelmed/display/DicomCleaner_no.utf-8_properties
com/pixelmed/display/DicomCleaner_pl.utf-8_properties
com/pixelmed/display/DicomCleaner_pt.utf-8_properties
com/pixelmed/display/DicomCleaner_ru.utf-8_properties
com/pixelmed/display/DicomCleaner_sv.utf-8_properties
com/pixelmed/display/DicomCleaner_tr.utf-8_properties
com/pixelmed/display/DicomCleaner_zh_CN.utf-8_properties
---------------------
2016/12/13
Additional Toshiba multipage screen changes
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/OCR_Glyphs_DoseScreen.xml
---------------------
2016/12/13
Update DicomCleaner localization with translations for FileChooser and Send and Query dialogs
com/pixelmed/display/DicomCleaner_cs.utf-8_properties
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_el.utf-8_properties
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomCleaner_hu.utf-8_properties
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomCleaner_ko.utf-8_properties
com/pixelmed/display/DicomCleaner_nl.utf-8_properties
com/pixelmed/display/DicomCleaner_no.utf-8_properties
com/pixelmed/display/DicomCleaner_pl.utf-8_properties
com/pixelmed/display/DicomCleaner_pt.utf-8_properties
com/pixelmed/display/DicomCleaner_ru.utf-8_properties
com/pixelmed/display/DicomCleaner_sv.utf-8_properties
com/pixelmed/display/DicomCleaner_tr.utf-8_properties
com/pixelmed/display/DicomCleaner_zh_CN.utf-8_properties
com/pixelmed/display/SafeFileChooser_cs.utf-8_properties
com/pixelmed/display/SafeFileChooser_da.utf-8_properties
com/pixelmed/display/SafeFileChooser_el.utf-8_properties
com/pixelmed/display/SafeFileChooser_fi.utf-8_properties
com/pixelmed/display/SafeFileChooser_hu.utf-8_properties
com/pixelmed/display/SafeFileChooser_nl.utf-8_properties
com/pixelmed/display/SafeFileChooser_no.utf-8_properties
com/pixelmed/display/SafeFileChooser_pl.utf-8_properties
com/pixelmed/display/SafeFileChooser_pt.utf-8_properties
com/pixelmed/display/SafeFileChooser_ru.utf-8_properties
com/pixelmed/display/SafeFileChooser_tr.utf-8_properties
---------------------
2016/12/13
Do not throw exception if nothing selected when pressing Clean (000978)
com/pixelmed/display/DicomCleaner.java
---------------------
2016/12/16
Fix scpecg DateField always 0/0/0 due to incorrect length check (000979)
com/pixelmed/scpecg/Section1.java
---------------------
2016/12/20
Add DicomCleaner localizations for OK and Cancel in JOptionPane, and include Folder Name property in FileChooser localizations for export
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/ApplicationFrame.properties
com/pixelmed/display/ApplicationFrame_cs.utf-8_properties
com/pixelmed/display/ApplicationFrame_da.utf-8_properties
com/pixelmed/display/ApplicationFrame_el.utf-8_properties
com/pixelmed/display/ApplicationFrame_fi.utf-8_properties
com/pixelmed/display/ApplicationFrame_hu.utf-8_properties
com/pixelmed/display/ApplicationFrame_nl.utf-8_properties
com/pixelmed/display/ApplicationFrame_no.utf-8_properties
com/pixelmed/display/ApplicationFrame_pl.utf-8_properties
com/pixelmed/display/ApplicationFrame_pt.utf-8_properties
com/pixelmed/display/ApplicationFrame_ru.utf-8_properties
com/pixelmed/display/ApplicationFrame_tr.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/display/SafeFileChooser_cs.utf-8_properties
com/pixelmed/display/SafeFileChooser_da.utf-8_properties
com/pixelmed/display/SafeFileChooser_el.utf-8_properties
com/pixelmed/display/SafeFileChooser_fi.utf-8_properties
com/pixelmed/display/SafeFileChooser_hu.utf-8_properties
com/pixelmed/display/SafeFileChooser_nl.utf-8_properties
com/pixelmed/display/SafeFileChooser_no.utf-8_properties
com/pixelmed/display/SafeFileChooser_pl.utf-8_properties
com/pixelmed/display/SafeFileChooser_pt.utf-8_properties
com/pixelmed/display/SafeFileChooser_ru.utf-8_properties
com/pixelmed/display/SafeFileChooser_tr.utf-8_properties
---------------------
2016/12/21
Improve tracing for deferred RLE decompression
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2016/12/21
Only try to compress images; improve javadoc
com/pixelmed/apps/CompressDicomFiles.java
---------------------
2016/12/21
Log if attempting to compress non-image; improve javadoc
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2016/12/21
Add RLE compression (000980)
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
---------------------
2016/12/21
Factor out RLE compression of each frame into separate class (000980)
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
com/pixelmed/dicom/CompressedFrameEncoder.java
com/pixelmed/dicom/Makefile
---------------------
2016/12/21
Do not use J2K RCT component transformation when other than RGB input, e.g., if YBR-FULL; will fail with exception instead if only JJ2000 codec (000981)
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2016/12/21
Change approach to YBR_FULL input to compression as J2K ... fail since anything other than RGB to YBR_RCT is not legal anyway (even though previous approach of turning off component transform in codec does work with native even though not with JJ2000 codec, since result is still illegal, and also doesn't display correctly out of SourceImage without messing with YBR expectations) (000981)
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Makefile
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2016/12/27
Add utility to convert raw grayscale 32 bit float to DICOM and test with Speedy CT Image Delivery Challenge Apple sample
com/pixelmed/convert/Makefile
com/pixelmed/convert/RawImageDescription.java
com/pixelmed/convert/RawToDicomMultiFrame.java
---------------------
2017/01/03
Update additional Toshiba multipage screen changes to handle head only by removing duplicate training hyphen check and correct regression failure on testocracquiredimagestoshibadcmsroutputheadandbodyphantommultipage caused by failing to set detailValuesComplete to true after split second line eventTotalmAs and eventExposureTime
com/pixelmed/doseocr/Makefile
com/pixelmed/doseocr/OCR.java
---------------------
2017/01/11
Update slf4j libraries
Makefile.common.mk
lib/additional/slf4j-api-1.7.13.jar(DEAD)
lib/additional/slf4j-api-1.7.22.jar
lib/additional/slf4j-simple-1.7.13.jar(DEAD)
lib/additional/slf4j-simple-1.7.22.jar
---------------------
2017/01/11
Add slf4j logging to SingleImagePanel class and also include SLF4JCOMPILEADDITIONALJAR in overridden .java.class in package Makefile, since wasn't present, but did not fix isDebugLevel() not working when slf4j-simple jar is used rather than relying on pixelmed implementation (did not fix (000983))
com/pixelmed/apps/Makefile
com/pixelmed/display/Makefile
com/pixelmed/display/SingleImagePanel.java
---------------------
2017/01/11
Add slf4j logging
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2017/01/11
Add slf4j logging
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2017/01/11
Add support for reading and displaying and windowing 16 bit per channel color images (000984) - only uncompressed images supported so far; also added more slf4j logging
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2017/01/13
Consistently parameterize JAVAVERSIONTARGET in JAVAVERSIONTARGETJARFILE in all Makefiles; still had some hardwired 1.7 occurrences
com/pixelmed/display/Makefile
com/pixelmed/utils/Makefile
---------------------
2017/01/17
Add support for loading, displaying and redacting compressed YBR_FULL_422 images, by using nearest neighbor replication of chrominance values for two horizontal luminance pixels when fetching a BufferedImage from SourceImage, with the upsampling deferred until retrieving the byte array from which to build the BufferedImage Raster regardless of the source (in memory, memory mapped or on disk) or the VR (OB or OW), set the nframesamples directly rather than always assuming it is width*height*samples to handle when there are half the chrominance samples, set framesizebytes similarly, and change YBR_FULL_422 to YBR_FULL when performing blackout and before updating the blacked out SourceImage in place (000986)
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2017/01/17
Report subclass when internal error with wrong value type (000988)
com/pixelmed/dicom/Attribute.java
---------------------
2017/01/17
Add support for redaction of 16 bit per channel color images; blackout creates OtherWordAttributeMultipleFrameArrays that SourceImage was not handling (000987); also noticed that OW left on disk with reading per frame short arrays would not have worked because array not being allocated
com/pixelmed/display/SourceImage.java
---------------------
2017/01/17
Experiment with trying to speed up copy() (e.g., of PixelData attribute payload, as used during cleaning) by using NIO Channels and Buffers, but was no faster than traditional way of reading a relatively large buffer from streams
com/pixelmed/utils/CopyStream.java
---------------------
2017/01/18
Try linear interpolation of adjacent YBR_FULL_422 Cb and Cr values rather than NN replication - doesn't work - gives nasty aliasing
com/pixelmed/display/SourceImage.java
---------------------
2017/01/18
Revert failed attempt at linear interpolation and go back to nearest neighbor replication for YBR_FULL_422
com/pixelmed/display/SourceImage.java
---------------------
2017/01/24
Perform YBR to RGB conversion in ConsumerFormatImageMaker if necessary (000989)
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/Makefile
---------------------
2017/01/24
Do not throw exception from within debugging message if BufferedImageUtilities.convertYBRToRGB() applied to other than ComponentColorModel, but still does not support conversion of other models (000990)
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2017/01/24
Update copyright to 2017
COPYRIGHT
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/anatproc/package.html
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/apps/package.html
com/pixelmed/convert/AnalyzeException.java
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawImageDescription.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/RawToDicomMultiFrame.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/convert/package.html
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/database/package.html
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/CompressedFrameEncoder.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherWordAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SOPInstanceReference.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UniversalResourceAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedCharactersAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/package.html
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/package.html
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/TaskChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
com/pixelmed/display/event/package.html
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/displaywave/package.html
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/dose/package.html
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/package.html
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/SelfRegisteringListener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/ftp/package.html
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/geometry/package.html
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/RequestCommandMessage.java
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/network/package.html
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/query/package.html
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/scpecg/package.html
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/package.html
com/pixelmed/slf4j/Logger.java
com/pixelmed/slf4j/LoggerFactory.java
com/pixelmed/slf4j/package.html
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
com/pixelmed/test/TestBinaryAttribute_AllTests.java
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestCodedSequenceItemGetCodeMeaning.java
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCodingScheme_AllTests.java
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
com/pixelmed/test/TestGetPrivateFromAttributeList.java
com/pixelmed/test/TestGetPrivate_AllTests.java
com/pixelmed/test/TestLaterality.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivateSiemensUltrasoundRawDataRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
com/pixelmed/test/TestSourceOfDoseInformation.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
com/pixelmed/test/UserInterfaceUtilities.java
com/pixelmed/test/package.html
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FileReaper.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/MessageLogger.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/ThreadUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/utils/package.html
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/validate/package.html
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/WebServerApplicationProperties.java
com/pixelmed/web/package.html
---------------------
2017/01/24
Update slf4j libraries
Makefile
---------------------
2017/01/24
Use cleaned test file for 422
com/pixelmed/display/Makefile
---------------------
2017/02/05
Return new OID whem main method invoked with no arguments (000993)
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2017/02/24
Return UUID if given OID on command line (000994)
com/pixelmed/utils/UUIDBasedOID.java
---------------------
2017/02/28
Clean up javadoc
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2017/02/28
Update slf4j libraries
README
---------------------
2017/02/28
Add support for 8 bit label maps (000995)
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2017/02/28
Detect and suppress application of windowing when IndexColorModel resulting from single bit image (e.g., segmentation) (000996)
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/WindowCenterAndWidth.java
---------------------
2017/03/09
Correct PhotometricInterpretation when recompressing uncompressed (not JPEG lossy) YBR_FULL_422
com/pixelmed/apps/CompressDicomFiles.java
---------------------
2017/03/21
Emit output even if no EOI marker, i.e., on premature EOF (000998)
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2017/03/25
Add Romanian localization; update other localizations with revised OptionPane cancel and OK strings, and use improved FileChooser.folderNameLabelText
DicomCleanerAssumingJREInstalled_TestAllLocalizations.bat
com/pixelmed/display/ApplicationFrame_cs.utf-8_properties
com/pixelmed/display/ApplicationFrame_el.utf-8_properties
com/pixelmed/display/ApplicationFrame_fi.utf-8_properties
com/pixelmed/display/ApplicationFrame_hu.utf-8_properties
com/pixelmed/display/ApplicationFrame_ro.utf-8_properties
com/pixelmed/display/DicomCleaner_ro.utf-8_properties
com/pixelmed/display/DicomImageBlackout_ro.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/display/SafeFileChooser_cs.utf-8_properties
com/pixelmed/display/SafeFileChooser_da.utf-8_properties
com/pixelmed/display/SafeFileChooser_el.utf-8_properties
com/pixelmed/display/SafeFileChooser_fi.utf-8_properties
com/pixelmed/display/SafeFileChooser_hu.utf-8_properties
com/pixelmed/display/SafeFileChooser_nl.utf-8_properties
com/pixelmed/display/SafeFileChooser_no.utf-8_properties
com/pixelmed/display/SafeFileChooser_pt.utf-8_properties
com/pixelmed/display/SafeFileChooser_ro.utf-8_properties
com/pixelmed/display/SafeFileChooser_ru.utf-8_properties
com/pixelmed/display/SafeFileChooser_tr.utf-8_properties
com/pixelmed/network/ApplicationEntityConfigurationDialog_ro.utf-8_properties
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkApplicationConfigurationDialog_ro.utf-8_properties
---------------------
2017/03/29
Correct log message on exception that has too few arguments in format string (000999)
com/pixelmed/apps/DeidentifyAndRedact.java
---------------------
2017/03/29
Leave large OB or OW attributes on disk even if not Pixel Data, since sometimes very large private data elements (001000)
com/pixelmed/dicom/AttributeFactory.java
---------------------
2017/04/04
Add Ophthalmic Optical Coherence Tomography for Angiographic Imaging data elements and SOP Classes (Sup 197 FT); Add genetic modifications to patient (CP 1619)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/04/05
Add Patient Radiation Dose Structured Report SOP Classes (Sup 191 FT); Simplified Adult Echo SR Storage SOP Class (Sup 169 FT)
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
---------------------
2017/04/05
Add Advanced Blending Presentation State Storage data elements and SOP Classes (Sup 189 FT)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/04/06
Handle single quote in filename during database insertion (001001)
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2017/04/16
Add V-Preview X and Y Map safe private data elements
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2017/04/16
Add Entrance Dose Derivation data element (CP 1513)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/04/18
Add repeat flag and reason to RDSR to help with outlier analysis (CP 1646)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2017/04/18
Update data dictionary for Add Dose Reference UID To Fraction Scheme (CP 1659)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/04/18
Fix Type of Dimension Organization UID (within the Dimension Index Sequence) (CP 1604)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2017/04/19
Remove incorrect GE V-Preview height map private data elements that were apparently from draft document
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2017/04/21
Add Volume Rendering Volumetric Presentation States data elements and SOP Classes (Sup 190 FT)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/04/22
Add method to report whether image storage SOP Class is multiframe or not
com/pixelmed/dicom/SOPClass.java
---------------------
2017/05/12
Update codec to 20170512 release
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2017/05/16
More specific exception thrown when cv, csd or cm attributes missing for CodedSequenceItem (001003)
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2017/05/24
Do not hang in CopyStream.copy if input is truncated (shorter than requested), e.g., for OtherWordAttributeOnDisk for PixelData (001004)
com/pixelmed/utils/CopyStream.java
---------------------
2017/07/01
Add data elements for Protocol Approval (Sup 192)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/08/11
Specifically check size of single array allocated for all frames before failing to allocate it if too large and throw specific exception; should be deferring decompression in such cases and using CompressedFrameDecoder.getDecompressedFrameAsBufferedImageUsingImageReader() (001007)
com/pixelmed/dicom/AttributeList.java
---------------------
2017/08/11
Defer decompression of PixelData since don't actually need to decompress it at all for this use case, otherwise may be too large to allocate (001007)
com/pixelmed/dicom/AttributeTreeBrowser.java
---------------------
2017/08/11
Logging to check behavior of StudyReceiver
com/pixelmed/apps/Makefile
com/pixelmed/apps/StudyReceiver.java
---------------------
2017/09/16
Correct Trace message in C-GET SCU for C-GET-RSP (001009)
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2017/09/16
Handle dataset in C-GET-RSP (001010)
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2017/09/16
Handle P-DATA that should be ignored in State 7 (001011)
com/pixelmed/network/Association.java
---------------------
2017/09/16
Update comment with list of statuses in C-GET response, and restrict pending to FF00 (not FF01, which is only for C-FIND)
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2017/09/18
Use new standard code for Retain Institution Identity Option (CP 1675)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2017/09/18
Add new standard data elements (CPACK92)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/09/20
Backout addition of some of CPACK92 data elements because exceeds method size limit in java (code too long error) (001014)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/09/20
Show pixels rather than 0 mm when no spacing information when measuring distance (001013)
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/geometry/GeometryOfVolume.java
---------------------
2017/09/23
Add mechanism to index tiles (find frame for row and column) to enable navigation of tiled (e.g., WSI) images by row and column, not just frame, in DicomImageViewer (001015)
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/Makefile
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
---------------------
2017/09/24
More slf4j debugging messages in DicomImageViewer
com/pixelmed/display/DicomImageViewer.java
---------------------
2017/09/24
Do not remove nulled weak references when processing event to avoid concurrent modification exception from preventing processing of event - temporary workaround for (001018)
com/pixelmed/event/ApplicationEventDispatcher.java
---------------------
2017/09/24
Start work on reporting physical position on slide by extracting physical offsets in tiled index (001016)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2017/09/24
Handle non-square tiles correctly when building index (001019)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2017/09/24
Do not fail if Number of Frames missing for single frame WSI image (001017)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2017/09/24
Do not fail if unable to get values for row and column sliders for display of tiled images, just don't update them (001020)
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2017/09/24
Start work on reporting physical position on slide by extracting physical offsets in tiled index (001016)
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2017/09/25
Do not require unnecessary compression level command line argument (001021)
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2017/09/25
Move the TS to outputstring mapping functions to CompressedFrameEncoder and make them public
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2017/09/25
Add baseline JPEG support to CompressedFrameEncoder (001022)
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2017/09/25
Silently ignore null weak references that are not being removed
com/pixelmed/event/ApplicationEventDispatcher.java
---------------------
2017/09/25
Move compressed input reader selection messages from info to debug level
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2017/09/26
Cope if cannot build tile index for WSI and just display frames slider (001023)
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2017/09/28
For viewing, build the inverse index during construction if we know we will need it rather than deferring
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2017/09/28
Add option to ignorePlanePosition and assume expected raster order of tiles
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2017/09/29
reuse fragment buffer if large enough rather than discarding and reallocating
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2017/10/27
Correct javadoc description of JSON file
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2017/10/27
Fall back to assuming raster scan order if cannot build tile index (001024)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2017/10/29
Fix TID 1419 Row 18 to check concept name code of Equivalent Meaning of Concept Name (001025)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2017/10/29
Add algorithm identification template with HAS CONCEPT MOD to TID 300 and TID 1419 (Sup 200 DFT) and make relationship-specific versions of TID 4019 for various Mammo CAD inclusions
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2017/10/31
Update to JRE 151 and insert into JRE an edited fontconfig.properties that uses Malgun Gothic instead of Gulim to take advantage of default font that is available even when Korean language pack is not installed - this only works with 'own JRE' configurations and does not affect (fix the problem for) deployments using the system installed JRE (isse reported to Oracle) (001026)
windows/Makefile
windows/fontconfig.properties
windows/jre1.8.0_151-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip
---------------------
2017/11/20
Add usage of Temporal Position Macro as needed for Enhanced MR, Enhanced CT, Enhanced PET and related Legacy objects (CP 1189)
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2017/12/05
Update location of test files
com/pixelmed/convert/Makefile
---------------------
2017/12/05
Factor out flag controlling preference for sform or qform if both present, for testing
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2017/12/05
Work on correcting qform normal correction (001029)
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2017/12/05
Use qfac and pixdim[3] for X and Y as well as Z positions for NIfTI qform position calcaultion (001029)
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2017/12/05
Use column not row of sform matrix in NIfTI calculation of orientation vector (001030)
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2017/12/10
Extend BufferedImage description to include characteristics of ComponentSampleModel and allow return of String in addition to writing to PrintStream
com/pixelmed/display/BufferedImageUtilities.java
---------------------
2017/12/10
Explore characteristics of multibank BufferedImage returned from lossless pixelmed codec if RGB, and conversion to single bank pixel interleaved performed implicitly by Raster.getDataElements() used in makeNewBufferedImageIfNecessary() (and AttributeList) (001031)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2017/12/10
Add lossless JPEG RGB test case
com/pixelmed/apps/Makefile
---------------------
2017/12/10
Imnprove error reporting when incorrect number of arguments
com/pixelmed/apps/DecompressDicomFiles.java
---------------------
2017/12/10
Correct javadoc
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
---------------------
2017/12/11
Compute inverse tile index even if NumberOfFrames less than product of number of rows and columns of tiles, and do not abandon computation of tile index when NumberOfFrames less than product of number of rows and columns of tiles, even if computation of number of rows and columns of tiles is wrong for some reason (001032)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2017/12/30
Update dictionary to 2017e and remove old toolkit keywords prior to CP 850 establishment of official keywords since need to limit size of class (001014)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2017/12/30
Update dictionary to 2017e and remove old toolkit keywords prior to CP 850 establishment of official keywords since need to limit size of class (001014)
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2017/12/30
Only build TiledFramesIndex in TiledSourceImageSortOrderPanel if SOPClass.isTiledImageStorage()
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2017/12/30
Add mechanism to leave compressed frames on disk if too large to fit in memory even compressed (001035)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
com/pixelmed/display/SourceImage.java
---------------------
2017/12/30
Do not fail if all compressed frames in one fragment but should be left on disk (001036)
com/pixelmed/dicom/AttributeList.java
---------------------
2017/12/30
Implement method to write compressed fragments left on disk as item fragments to allow copying to work, e.g., in DicomCleaner Clean action (001038)
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
---------------------
2017/12/30
Implement selective redaction of JPEG blocks when compressed pixel data frames were left on disk rather than read into memory (001039)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
com/pixelmed/display/ImageEditUtilities.java
---------------------
2017/12/30
Correct javadoc
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
---------------------
2018/01/14
Add support for checking TID 4200 Breast Imaging Report (001040)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2018/02/08
Handle JPEG color space conversion ourselves to work around weird JIIO decoder heuristics (001041)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2018/02/08
Use ICC profile nested in Optical Path if present; currently assumes only one Optical Path or all the same profile (001042)
com/pixelmed/display/SourceImage.java
---------------------
2018/02/09
Be more selective about when not to trust lossy JPEG Reader wrt. color space and transformation in order to avoid converting to YBR when components really are encoded as RGB and Reader assumes that correctly, by examining metadata (including Adobe APPE segment with trasnform == 0) and getting Raster to do it ourselves (if Reader supports getRaster() like the default Reader (but not the native JAI JIIO JPEG Reader), otherwise color convert returned BufferedImage from Reader) (001044)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2018/02/09
Explicitly inactivate and activate sort order panels so as not to respond to inappropriate frame selection change events (001045)
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2018/02/09
update copyright
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/convert/AnalyzeException.java
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawImageDescription.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/RawToDicomMultiFrame.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameEncoder.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherWordAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SOPInstanceReference.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UniversalResourceAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedCharactersAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/TaskChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/SelfRegisteringListener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/RequestCommandMessage.java
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/slf4j/Logger.java
com/pixelmed/slf4j/LoggerFactory.java
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
com/pixelmed/test/TestBinaryAttribute_AllTests.java
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestCodedSequenceItemGetCodeMeaning.java
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCodingScheme_AllTests.java
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
com/pixelmed/test/TestGetPrivateFromAttributeList.java
com/pixelmed/test/TestGetPrivate_AllTests.java
com/pixelmed/test/TestLaterality.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivateSiemensUltrasoundRawDataRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
com/pixelmed/test/TestSourceOfDoseInformation.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
com/pixelmed/test/UserInterfaceUtilities.java
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FileReaper.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/MessageLogger.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/ThreadUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/WebServerApplicationProperties.java
---------------------
2018/02/16
Add PixelData Attribute class debugging messages
com/pixelmed/display/SourceImage.java
---------------------
2018/03/01
Tidy up javadoc
com/pixelmed/dicom/ImageLibrary.java
---------------------
2018/03/01
Factor out creation of ContributingEquipmentSequence in ImageLibrary so sub-classes can override (001046)
com/pixelmed/dicom/ImageLibrary.java
---------------------
2018/03/01
Add private codes for KOS creation
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2018/03/02
Add File argument write() method and use non-deprecated AttributeList write()
com/pixelmed/dicom/ImageLibrary.java
---------------------
2018/03/07
Detect when too few encoded compressed frames for Number of Frames during read() rather than waiting until frames are used, e.g., during write() (001047)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2018/03/29
Update data dictionary with tags from CPACK 96
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2018/03/29
Add network utilities to find unused port and check if port is in use to allow tests to succeed if port already used; workaround for lack of exception from StorageSOPClassSCPDispatcher constructor not failing in ServerSocket or accept() in such cases (001049)
com/pixelmed/network/Makefile
com/pixelmed/network/NetworkUtilities.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
---------------------
2018/03/29
More debug rather than trace messages to monitor timing of C-STORE last fragment and sending successful response (to monitor interaction with dcmtk, which times out if very large files, e.g., WSI, if its -td timeout settings are not extended
com/pixelmed/network/StorageSOPClassSCP.java
---------------------
2018/03/29
Add simple SOP Instance receiver that can be sub-classed to doing things when instances are received (which do not depend on receiving the whole study before processing, like StudyReceiver does
com/pixelmed/apps/InstanceReceiver.java
com/pixelmed/apps/Makefile
com/pixelmed/apps/testinstancereceiver.properties
---------------------
2018/03/30
When setting frameItemLengths for use with OtherByteAttributeCompressedSeparateFramesOnDisk, use fragmentRemaining instead of vl, to make sure don't read past EOI marker if trailing padding (may be odd), else J2K reader fails; also clean up some debuggging messages and don't do expenseive operations like HexDump unless level enabled
com/pixelmed/apps/Makefile
com/pixelmed/apps/TiledPyramid.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
---------------------
2018/03/31
Clean up more debuggging messages and don't do expensive operations like HexDump unless level enabled
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/Makefile
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/web/WadoRequestHandler.java
---------------------
2018/03/31
Redact JPEG losslessly even if left on disk (001051)
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
---------------------
2018/04/01
Add Scheduled Procedure Step Expiration DateTime data element (CP 1224)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2018/04/01
Upgrade Java release for Windows executables to 8.0_161, and parameterize where to get them
windows/Makefile
---------------------
2018/04/01
Add debugging messages
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2018/04/01
Remove deprecated constructors that used pre-slf4j debugging level, and add ANY Transfer Syntax argument to allow StorageSOPClassSCPDispatcher to accept any Transfer Syntax
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
---------------------
2018/04/01
Tidy up StorageSOPClassSCPDispatcher-related tests, including assuring that StorageSOPClassSCU does not have spurious debugging level argument and using generic largetmp
com/pixelmed/network/Makefile
---------------------
2018/04/01
Add utility to wait for incoming high resolution WSI and make a pyramid and send it on the network (001055)
com/pixelmed/apps/InstanceReceiver.java
com/pixelmed/apps/Makefile
com/pixelmed/apps/ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/testinstancereceiver.properties
com/pixelmed/apps/testwsireceiverpyramidsender.properties
---------------------
2018/04/01
Replace unresponsive jpedal.org javadoc link to allow javadoc to build
Makefile
---------------------
2018/04/01
Remove unresponsive jpedal.org javadoc link to allow javadoc to build
Makefile
---------------------
2018/04/03
Add data elements, SOP Class for DICOM Encapsulation of STL Models for 3D Manufacturing (Sup 205)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TagFromName.java
---------------------
2018/04/13
Make sure undefined length VL is not sign extended in long
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
---------------------
2018/04/13
More heap memory
ECGViewer.sh
---------------------
2018/04/13
Return number of frames whether in files or in memory, but not if all frames in one fragment in memory
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
---------------------
2018/04/13
Add a method to return the files for each frame
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
---------------------
2018/04/16
Add ability to control contents of preamble when writing (001058)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomOutputStream.java
---------------------
2018/04/19
Fix selective JPEG redaction for frames in memory (001060)
com/pixelmed/display/ImageEditUtilities.java
---------------------
2018/04/24
Update TID 1003 Person Observer Identifying Attributes per Sup 200
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2018/04/29
trace response status
com/pixelmed/network/StorageSOPClassSCU.java
---------------------
2018/04/29
more test files
com/pixelmed/apps/Makefile
---------------------
2018/05/06
Ignore illegal ICC profile (001061)
com/pixelmed/display/SourceImage.java
---------------------
2018/05/13
Fix exception when processing slider events if rows but no columns or vice versa for tiled WSI (001063)
com/pixelmed/dicom/Attribute.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
icons/ConvertAmicasJPEG2000FilesetToDicom.icns
icons/DicomCleaner.icns
icons/DicomImageBlackout.icns
icons/DicomImageViewer.icns
icons/DoseUtility.icns
icons/DownloadOrTransmit.icns
icons/MediaImporter.icns
icons/WatchFolderAndSend.icns
---------------------
2018/05/13
Undo prematurely checked in changes to Attribute class
com/pixelmed/dicom/Attribute.java
---------------------
2018/05/15
Add support in SourceImage for OtherByteAttributeMultipleCompressedFrames that is on disk (files) rather than in memory (001064)
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/display/SourceImage.java
---------------------
2018/05/15
Adjust debug message levels
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2018/05/15
Factor out downsampling of attributes from file, and adjust debug message levels
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/05/18
Do not re-create SourceImage for every frame access (001065)
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/05/18
icons/ConvertAmicasJPEG2000FilesetToDicom.icns
icons/DicomImageBlackout.icns
icons/DicomImageViewer.icns
icons/DoseUtility.icns
icons/DownloadOrTransmit.icns
icons/MediaImporter.icns
icons/WatchFolderAndSend.icns
---------------------
2018/05/18
Make PhotometricInterpretation what is encoded not what source was (001066)
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/05/18
Change color space conversion messages from debug to info
com/pixelmed/dicom/AttributeList.java
---------------------
2018/05/18
Do not complain about missing PerFrameFunctionalGroups if TILED_FULL (CP 1713)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2018/05/18
Change photometric interpretation messages from debug to info
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/05/18
Do not fail when JPEG decompressed frame size is less than nominal frame size (001067)
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/05/18
Do not check every frame and do not fail if cannot determine from metadata whether or not to perform own YBR conversion (001068) (001069)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2018/05/19
Add a convenience method to create a single item coded sequence attribute and add it to an AttributeList
com/pixelmed/dicom/CodedSequenceItem.java
---------------------
2018/05/20
Recognize JPEG 2000 not just JPEG 2000 Lossless when choosing output format for JIIO (001070)
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2018/05/20
Recognize JPEG and JPEG-LS variants as well (make symmetric with CompressedFrameDecoder) when choosing output format for JIIO (001070)
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2018/05/21
Add parameter to control whether or not to generate unassigned functional groups
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/05/21
Change tmp location
com/pixelmed/apps/Makefile
---------------------
2018/05/21
Start work on computing lengths of Attributes as they will be encoded in a particular Transfer Syntax for calculating byte offsets ... not yet complete so flagged as deprecated for now
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2018/05/27
Report AttributeTag in Exception for unlikely fixed VL for non-bulk data tag
com/pixelmed/dicom/AttributeList.java
---------------------
2018/05/27
More tiled pyramid tests
com/pixelmed/apps/Makefile
---------------------
2018/05/28
Decompress PixelData inside list, or not, during list.read() depending on setting for parent list (001071)
com/pixelmed/dicom/AttributeList.java
---------------------
2018/06/02
Harmonize different variants of slider update when not (re-)creating slider to check value is different before requesting update
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2018/06/02
Do not fail building inverse tile index if not all tiles encoded (sparse) (001071)
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2018/06/03
Display blank tile if unencoded tile selected if not all tiles encoded (sparse) rather than leaving last available tile displayed (001074)
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2018/06/07
TID 1402 Row 5 and 6 image references are UC not MC (001078)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2018/06/07
Add TID 1001 to Breast Imaging Report (CP 1739)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2018/06/22
Make SegmentNumber increment by one from one as required rather than re-using original label index from label map, and include the latter in SegmentLabel (000720)
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2018/06/22
Use Tree rather than Hash by index values when creating structures to iterate through when creating SegmentSequence so that repeated invocations are deterministic (create the same order of segments every time) (001079)
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
---------------------
2018/06/22
Do not include AcquisitionContextSequence for Secondary Capture instances (001080)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/06/22
Improve brain atlas conversion to segmentation testing paths
com/pixelmed/convert/Makefile
com/pixelmed/display/Makefile
---------------------
2018/06/26
Use Radiopharmaceutical Start DateTime, if present, for SUV calculation, as added in CP 530 (001081)
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/test/TestSUVTransformValues.java
---------------------
2018/06/26
Update CID 29 with OPTBSV and OPTENF (CP 1750)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2018/06/26
Add flag to distinguish studies imported from outside (CP 1760)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/validate/DicomIODDescriptionsSource.xml
---------------------
2018/06/26
Add Beam Dose Point Source to External Contour Distance data element (CP 1762)
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2018/07/01
Add utility to dump contents of Segment Sequence in Segmentation object (001084)
com/pixelmed/apps/Makefile
com/pixelmed/apps/TabulateSegmentSequence.java
com/pixelmed/dicom/CodedSequenceItem.java
---------------------
2018/07/01
Add utility to dump contents of Segment Sequence in Segmentation object (001084)
com/pixelmed/apps/TabulateSegmentSequence.java
---------------------
2018/07/01
Add title line, proper delimiters for empty codes to maintain alignment, and color values
com/pixelmed/apps/TabulateSegmentSequence.java
---------------------
2018/07/01
Redirect output of testing seg tabulation to file
com/pixelmed/apps/Makefile
---------------------
2018/07/07
Correct javadoc for keepInstitutionIdentity parameter
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2018/08/03
use shutdownOutput() not close() to send TCP FIN rather than RST per Igor Svistoun and "https://docs.oracle.com/javase/8/docs/technotes/guides/net/articles/connection_release.html" (001087), and clean up ARTIM since cannot detect other end closing - socket.isClosed() just checked when close() was called from our end :( (per Igor Svistoun) (001088)
com/pixelmed/network/Association.java
---------------------
2018/08/05
Only add VOILUTFunction when window values present (001089)
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawToDicomMultiFrame.java
---------------------
2018/08/05
Use non-deprecated CommonConvertedAttributeGeneration.generateCommonAttributes method with generateUnassignedConverted argument in converters, but leave deprecated method in case used by external packages
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawToDicomMultiFrame.java
icons/ConvertAmicasJPEG2000FilesetToDicom.icns
icons/DicomImageBlackout.icns
icons/DicomImageViewer.icns
icons/DoseUtility.icns
icons/DownloadOrTransmit.icns
icons/MediaImporter.icns
icons/WatchFolderAndSend.icns
---------------------
2018/08/06
Add spatial and temporal dimensions in NIfTI converter (001090)
com/pixelmed/convert/Makefile
com/pixelmed/convert/NIfTI1ToDicom.java
---------------------
2018/08/06
Add modality-specific frame type functional group macro to converted images (001092)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/dicom/SOPClass.java
---------------------
2018/08/06
Add Common CT/MR Image Description Macro Attributes at both top and frame levels (001094)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/08/17
Guess from first few bytes rather than assume when empty or missing Transfer Syntax UID in meta information header (001095)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
com/pixelmed/test/TestAttributeList_AllTests.java
icons/ConvertAmicasJPEG2000FilesetToDicom.icns
icons/DicomImageBlackout.icns
icons/DicomImageViewer.icns
icons/DoseUtility.icns
icons/DownloadOrTransmit.icns
icons/MediaImporter.icns
icons/WatchFolderAndSend.icns
---------------------
2018/08/29
Add a utility to encapsulate PDF, CDA, STL (001096)
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/EncapsulateData.java
com/pixelmed/convert/Makefile
---------------------
2018/08/29
Adapt encapsulation for STL files
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/EncapsulateData.java
com/pixelmed/convert/Makefile
---------------------
2018/08/29
Add a utility to unencapsulate PDF, CDA, STL (001097)
com/pixelmed/convert/Makefile
com/pixelmed/convert/UnencapsulateData.java
---------------------
2018/08/29
Check small and large files are working when unencapsulating and add test cases for odd abd even lengths
com/pixelmed/convert/Makefile
com/pixelmed/convert/UnencapsulateData.java
---------------------
2018/08/30
Make JPEG codec fail when decompressing if given input it cannot decompress such as baseline JPEG rather than lossless, rather than quietly returning black image (001098)
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2018/08/30
When decompressing JPEG, try another codec if reader fails, even if compressed data inconsistent with Transfer Syntax (001099)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2018/08/30
Do not throw exception when malformed encapsulated pixel data or reader failure, just return nothing (which will fail later if it matters), since may be inside icon image sequence and not care (001100)
com/pixelmed/dicom/AttributeList.java
---------------------
2018/09/03
Reduce memory usage when finding suitable character set for AttributeList by building set of unique code blocsk while recursing into sequences rather than first building single massive concatenated string (buffer) of all values that is not needed for anything else (001101)
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestSuitableCharacterSet.java
---------------------
2018/09/21
Update usage string
com/pixelmed/apps/DeidentifyAndRedact.java
---------------------
2018/09/22
CP 1674 related private codes
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2018/09/22
Add utility to pseudonymize files and sequester those most at risk of burned in annotation related identity leakage and non-images
com/pixelmed/apps/Makefile
com/pixelmed/apps/PseudonymizeAndSequester.java
---------------------
2018/09/22
Factor out patient, study, series and instance label methods for hierarchical folder name creation and add unit tests
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestHierarchicalFileName.java
com/pixelmed/test/TestHierarchicalFileName_AllTests.java
---------------------
2018/09/23
Factor out hierarchical path name component derivation from AttributeList as methods so that subclasses can use different strategies and use instance number + anatomy + laterality + view in PseudonymizeAndSequester
com/pixelmed/apps/Makefile
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/test/TestHierarchicalFileName.java
---------------------
2018/09/23
Factor out different folder naming strategies and move them all into MoveDicomFilesIntoHierarchy with parameter, but retain ability to override in subclasses
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/test/TestHierarchicalFileName.java
---------------------
2018/09/23
Add MG, SR, PR modalities and parameterize time for sleepIntervalMultiplier to speed up simulation
com/pixelmed/apps/MultiModalitySimulator.java
---------------------
2018/09/24
Set log message back to info rather than debug for filename since test scripts depend on it
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2018/09/24
Factor out unit tests
com/pixelmed/test/Makefile
com/pixelmed/test/TestStringUtilities.java
com/pixelmed/test/TestStringUtilities_AllTests.java
com/pixelmed/utils/Makefile
com/pixelmed/utils/StringUtilities.java
---------------------
2018/09/24
Factor out coded sequence itam and string methods into utilities
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/test/TestStringUtilities.java
com/pixelmed/utils/StringUtilities.java
---------------------
2018/09/28
Replace use of PATHTOHOME in Makefiles with shell variable HOME
Makefile.common.mk
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
com/pixelmed/database/Makefile
com/pixelmed/dicom/Makefile
com/pixelmed/display/Makefile
com/pixelmed/validate/Makefile
---------------------
2018/09/28
Add more data elements that need to be deidentified per PS3.15 Annex E (001103) (CP 1720)
Makefile.common.mk
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDeidentify.java
com/pixelmed/test/TestDeidentify_AllTests.java
---------------------
2018/09/28
Fix removeOrNullIdentifyingAttributes() method without protocol name not handling dates as requested (001104) - fix was included in previous check in for (001103)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2018/09/29
Remove unique device identification during de-identification (cp_dac477_moreonuniquedeviceid)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2018/09/29
Add specimen de-identification (CP 1826)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2018/09/30
Tidy up javadoc
com/pixelmed/dicom/CodedSequenceItem.java
---------------------
2018/10/13
Add de-identification of structured content, including PNAME in content tree (000809) as well as recognized unsafe content items and unrecognized TEXT content items while preserving mandatory content items in standard templates by replacing rather than removing (001105); also exclude generic Time attribute from being paired with generic Date attribute for date modification, since in normal use are in separate attribute lists (content items) (001106)
com/pixelmed/apps/Makefile
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_cs.utf-8_properties
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_el.utf-8_properties
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomCleaner_hu.utf-8_properties
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomCleaner_ko.utf-8_properties
com/pixelmed/display/DicomCleaner_nl.utf-8_properties
com/pixelmed/display/DicomCleaner_no.utf-8_properties
com/pixelmed/display/DicomCleaner_pl.utf-8_properties
com/pixelmed/display/DicomCleaner_pt.utf-8_properties
com/pixelmed/display/DicomCleaner_ro.utf-8_properties
com/pixelmed/display/DicomCleaner_ru.utf-8_properties
com/pixelmed/display/DicomCleaner_sv.utf-8_properties
com/pixelmed/display/DicomCleaner_tr.utf-8_properties
com/pixelmed/display/DicomCleaner_zh_CN.utf-8_properties
com/pixelmed/display/Makefile
com/pixelmed/test/Makefile
com/pixelmed/test/TestDeidentify.java
com/pixelmed/test/TestDeidentifyStructuredContent.java
com/pixelmed/test/TestDeidentify_AllTests.java
com/pixelmed/validate/PixelMedContextGroupsSource.xml
webstart/DicomCleanerUsage.html
webstart/images/DicomCleanerControlPanel.png
webstart/images/DicomCleanerControlPanelPassThru.png
---------------------
2018/10/15
Allow missing PerFrameFunctionalGroupsSequence when DimensionOrganizationType is TILED_FULL (001107)
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/10/18
Update copyright file to 2018
COPYRIGHT
---------------------
2018/10/19
Correct logging of exception (001108)
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2018/10/19
Add ability to check that encoded physical offsets match those predicted from origin, spacing and logical position (001109)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2018/10/20
Supply appropriate 3rd and 4th values for image and frame type for converted multiframe images (001110)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/10/20
Do not insert PatientOrientation for Legacy Converted Enhanced Images (001111)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/10/20
Do not insert Acquisition Context Sequence, Pixel Presentation, Volumetric Properties and Volume Based Calculation Technique during conversion to Segmentation (001112)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/10/20
Do not insert 3rd and 4th ImageType values during conversion to Segmentation
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/10/21
Update SR XML round trip and factory classes to be able to get/set/copy ObservationDateTime and UID (001116)
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
---------------------
2018/10/23
Detect TID 1501 in TID 1500 even if no image references (001116)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2018/10/25
Do not send JP2 box in compressed JPEG 2000 bitstream (001117)
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2018/10/26
Do not send JP2 box in compressed JPEG 2000 bitstream (001117)
com/pixelmed/dicom/CompressedFrameEncoder.java
---------------------
2018/11/02
Include pixelmed_imageio.jar rather than pixelmed_codec.jar in Windows executable zip file to match DicomCleaner.bat (001118)
Makefile
---------------------
2018/11/03
Do not throw exception parsing date value during database insertion if format string cannot be determined, e.g., for (illegal) value of '0' (001119)
com/pixelmed/database/DicomDatabaseInformationModel.java
---------------------
2018/11/04
Do not nsert Pixel Presentation and Volume Based Calculation Technique during conversion to WSI (001120)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
---------------------
2018/11/04
Add 64 bit write methods (001121)
com/pixelmed/dicom/BinaryOutputStream.java
---------------------
2018/11/10
Add Multi-energy CT data elements to dictionary (Sup 188)
com/pixelmed/apps/TiledPyramid.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2018/11/10
Correct comment for previous checkin related to calling removePrivateAttributes() since may no longer be consistent with PixelData content
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/11/11
Update to the Application Level Confidentiality Profile Attributes table (CP 1801)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2018/11/11
Add Institutional Department Type Code Sequence (CP 1809)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
---------------------
2018/11/18
Abortive experiments with pyramid size calculations
com/pixelmed/apps/TiledPyramid.java
---------------------
2018/11/18
Implement control file for patient ID replacements (001122) and write UID map used during pseudonymization (001123)
com/pixelmed/apps/PseudonymizeAndSequester.java
---------------------
2018/11/18
Implement control file for patient ID replacements (001122) and write UID map used during pseudonymization (001123)
com/pixelmed/apps/Makefile
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2018/11/18
Extend control file to autodetect based on header row original PatientID or StudyInstanceUID as matching key todrive patient ID replacements (001122) and write header rows for both result and UID map files
com/pixelmed/apps/Makefile
com/pixelmed/apps/PseudonymizeAndSequester.java
---------------------
2018/11/18
Separate results files into two, one for PatientID and the other for StudyInstanceUID (001122)
com/pixelmed/apps/Makefile
com/pixelmed/apps/PseudonymizeAndSequester.java
---------------------
2018/11/29
Tidy up javadoc
com/pixelmed/apps/PseudonymizeAndSequester.java
---------------------
2019/01/26
Breast imaging report changes (CP 1405 and CP 1838)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/PixelMedContextGroupsSource.xml
---------------------
2019/01/26
Add 36626-0 to CID 6050 (CP 1838)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2019/01/27
Update to the Application Level Confidentiality Profile Attributes table (CP 1801)
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
---------------------
2019/01/27
Deidentification of Reason for stuff, including visit (CP 1837)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2019/01/27
Remove SpecimenPreparationSequence during de-identification (CP 1826)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2019/01/27
Add 64 bit binary VRs (CP 1819)
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/OtherVeryLongAttribute.java
com/pixelmed/dicom/SignedVeryLongAttribute.java
com/pixelmed/dicom/UnsignedVeryLongAttribute.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
---------------------
2019/01/27
EXIF related element de-identification (CP 1736)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2019/01/27
Change dictionary population approach since old way exceeds maximum size of Java class; use XML dictionary and IE files created by dicom3tools and load dictionary from XML resources in jar file; deprecate TagFromName and cut it down to only those used in current toolkit (001014)
Makefile
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/elmdict.xml
com/pixelmed/dicom/elmdictie.xml
---------------------
2019/01/27
Reduce number of tags in TagFromName further by removing those used only for de-identification or that are modality-specific and use dictionary lookup in such classes in the toolkit (001014)
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestDeidentify.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
---------------------
2019/01/29
Correct javadoc
com/pixelmed/apps/PseudonymizeAndSequester.java
---------------------
2019/01/29
Add deprecated known used tags and add explanation to head of class TagFromName
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/TagFromName.java
---------------------
2019/01/30
Tidy up Javadoc
com/pixelmed/dicom/TagFromName.java
---------------------
2019/01/30
Update copyright date
COPYRIGHT
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/anatproc/package.html
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/InstanceReceiver.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/apps/ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend.java
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/TabulateSegmentSequence.java
com/pixelmed/apps/TiledPyramid.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/apps/package.html
com/pixelmed/convert/AnalyzeException.java
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawImageDescription.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/RawToDicomMultiFrame.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/convert/package.html
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/database/package.html
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/CompressedFrameEncoder.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherWordAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SOPInstanceReference.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UniversalResourceAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedCharactersAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/package.html
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/package.html
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/TaskChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
com/pixelmed/display/event/package.html
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/displaywave/package.html
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/dose/package.html
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/package.html
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/SelfRegisteringListener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/ftp/package.html
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/geometry/package.html
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/NetworkUtilities.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/RequestCommandMessage.java
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/network/package.html
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/query/package.html
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/scpecg/package.html
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/package.html
com/pixelmed/slf4j/Logger.java
com/pixelmed/slf4j/LoggerFactory.java
com/pixelmed/slf4j/package.html
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
com/pixelmed/test/TestBinaryAttribute_AllTests.java
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestCodedSequenceItemGetCodeMeaning.java
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCodingScheme_AllTests.java
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/test/TestDeidentify.java
com/pixelmed/test/TestDeidentifyStructuredContent.java
com/pixelmed/test/TestDeidentify_AllTests.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
com/pixelmed/test/TestGetPrivateFromAttributeList.java
com/pixelmed/test/TestGetPrivate_AllTests.java
com/pixelmed/test/TestHierarchicalFileName.java
com/pixelmed/test/TestHierarchicalFileName_AllTests.java
com/pixelmed/test/TestLaterality.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivateSiemensUltrasoundRawDataRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
com/pixelmed/test/TestSourceOfDoseInformation.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/test/TestStringUtilities.java
com/pixelmed/test/TestStringUtilities_AllTests.java
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
com/pixelmed/test/TestSuitableCharacterSet.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
com/pixelmed/test/UserInterfaceUtilities.java
com/pixelmed/test/package.html
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FileReaper.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/MessageLogger.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/ThreadUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/utils/package.html
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/validate/package.html
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/WebServerApplicationProperties.java
com/pixelmed/web/package.html
---------------------
2019/02/01
When removing stale meta information attributes, also remove any command group 0x0000 data elements, which should not be present but sometimes are (001126)
com/pixelmed/dicom/AttributeList.java
---------------------
2019/02/03
Return error not success if nothing matched in C-MOVE request (001127)
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCMove.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
---------------------
2019/02/03
Log at end of transfer having encountered errors (001131)
com/pixelmed/network/NetworkMediaImporter.java
---------------------
2019/02/03
Return failure response on C-MOVE to self, i.e., move destination AET same as called AET (000908)
com/pixelmed/apps/ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestCMove.java
com/pixelmed/test/TestCStore_AETs.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
---------------------
2019/02/03
Dump request identifier and SQL query when SQL exception thrown for query or retrieve
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
---------------------
2019/02/06
Write command group data elements even if not writing meta header (001133)
com/pixelmed/dicom/AttributeList.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
---------------------
2019/02/06
Recognize file as DICOM even if command group 0x0000 data element present after preamble (001132)
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestDicomFileUtilities_AllTests.java
com/pixelmed/test/TestIsDicomFile.java
---------------------
2019/02/06
Recognize file as DICOM even if command group 0x0000 data element present after preamble (001132), though still does not recognize if command group and no metaheader (001134)
com/pixelmed/dicom/DicomFileUtilities.java
---------------------
2019/02/06
Do not create PixelData element if missing compressed frame data (001135)
com/pixelmed/dicom/AttributeList.java
---------------------
2019/02/06
Make addFileMetaInformation() fail if missing mandatory values for TransferSyntaxUID, MediaStorageSOPClassUID or MediaStorageSOPInstanceUID
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
---------------------
2019/02/06
Have DicomCleaner recognize files with missing or empty TransferSyntaxUID in meta information (001136)
com/pixelmed/display/DicomCleaner.java
---------------------
2019/02/08
Set reader to null before trying to select replacement reader, else loop will never terminate after reader failure (001138)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2019/02/08
Have CompressedFrameDecoder getDecompressedFrameAsBufferedImage() support source of compressed bytes supplied with each call rather than all at once in constructor (001139)
com/pixelmed/dicom/CompressedFrameDecoder.java
---------------------
2019/02/11
Make removeValues() method in SequenceAttribute class mimic constructor so as to not prohibit subsequent addValues() (001140)
com/pixelmed/dicom/SequenceAttribute.java
---------------------
2019/02/11
Clamp destination height and width to one to prevent resampling exception if Rows or Columns is 1 (001141)
com/pixelmed/display/SingleImagePanel.java
---------------------
2019/02/12
throw a more specific exception if AttributeFactory.newAttribute() supplied with null AttributeTag
com/pixelmed/dicom/AttributeFactory.java
---------------------
2019/02/12
throw specific exception if unrecognized keyword for attribute in SetCharacteristicsFromSummary
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2019/02/12
Add TIFF and pyramidal tiled WSI conversion (001144)
com/pixelmed/convert/Makefile
com/pixelmed/convert/TIFFException.java
com/pixelmed/convert/TIFFFile.java
com/pixelmed/convert/TIFFImageFileDirectories.java
com/pixelmed/convert/TIFFImageFileDirectory.java
com/pixelmed/convert/TIFFImageFileDirectoryEntry.java
com/pixelmed/convert/TIFFTags.java
com/pixelmed/convert/TIFFToDicom.java
com/pixelmed/convert/TIFFTypes.java
com/pixelmed/convert/TIFFValues.java
---------------------
2019/02/12
Remove doxygenrelease from releaseall target
Makefile
---------------------
2019/02/22
Tidy up JavaDoc
com/pixelmed/dicom/EncapsulatedInputStream.java
---------------------
2019/02/23
Recognize ophthalmic photography as multiframe (001153)
com/pixelmed/dicom/SOPClass.java
---------------------
2019/02/23
Add FrameIncrementPointer when needed (001154)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/dicom/TagFromName.java
---------------------
2019/02/23
Add option to merge strips into a single image and make that the default (001155)
com/pixelmed/convert/Makefile
com/pixelmed/convert/TIFFFile.java
com/pixelmed/convert/TIFFToDicom.java
---------------------
2019/02/24
Handle empty string supplied instead of null for value of empty numeric rather than string attribute (001157)
com/pixelmed/apps/SetCharacteristicsFromSummary.java
---------------------
2019/02/24
Insert SpecificCharacterSet if needed (001158)
com/pixelmed/convert/TIFFToDicom.java
---------------------
2019/02/24
Improve documentation of need to insert SpecificCharacterSet before writing AttributeList (001158)
com/pixelmed/dicom/AttributeList.java
---------------------
2019/02/24
Improve common converted attribute handling of Frame of Reference Module Attributes (001160) and add insertion of default Synchronization Module Attributes when needed or allowed (001159)
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/TagFromName.java
---------------------
2019/02/24
Add test with retinal fundoscopy metadata for Ophthalmic Photography IOD
com/pixelmed/convert/Makefile
---------------------
2019/02/24
Insert SpecificCharacterSet if needed (001158)
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/EncapsulateCompressedPixelData.java
com/pixelmed/convert/EncapsulateData.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/RawToDicomMultiFrame.java
com/pixelmed/convert/TIFFToDicom.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
---------------------
2019/02/26
Factor out json library into Makefile.common.mk and include it in DICOMADDITIONALJARS
Makefile.common.mk
com/pixelmed/apps/Makefile
com/pixelmed/convert/Makefile
---------------------
2019/02/27
Improve class JavaDoc
com/pixelmed/convert/TIFFToDicom.java
---------------------
2019/02/27
Add ability to get/set byte array representation of values regardless of VR (001161)
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/OtherVeryLongAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
---------------------
2019/02/27
Start work on conversion to/from JSON (001162)
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestJSONRepresentation.java
com/pixelmed/test/TestJSON_AllTests.java
---------------------
2019/02/27
Clean up temorary files on exit
com/pixelmed/test/TestCMove.java
---------------------
2019/02/27
Add JSON read write methods and tests
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/02/27
Add JSON read write methods and tests
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/02/28
Add options to use keyword instead of tag, and to add tag or keyword to payload of each attribute in JSON
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/Makefile
---------------------
2019/02/28
Add support for PersonName structure in JSON conversion
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/02/28
Do not add trailing empty name component group delimiters when converting from JSON and do not insert empty component group entries when converting to JSON
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
---------------------
2019/02/28
Do not add trailing empty name component group delimiters when converting from JSON and do not insert empty component group entries when converting to JSON
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/02/28
Add more static methods for converting and writing JSON in one call
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
---------------------
2019/02/28
Clean up temporary files after tests completed (using deleteOnExit)
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
com/pixelmed/test/TestCStore_AETs.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestIsDicomFile.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
---------------------
2019/03/01
Correct index.html links in usage pages
webstart/DicomCleanerUsage.html
webstart/DoseUtilityUsage.html
---------------------
2019/03/02
Add test for de-identification of Aryanto 2016 paper data elements
com/pixelmed/test/TestDeidentify.java
---------------------
2019/03/03
Add not yet supported TIFF tiled LZW compressed sub-image test case
com/pixelmed/convert/Makefile
---------------------
2019/03/03
Add full sized SVS conversion for sub-image test case
com/pixelmed/convert/Makefile
---------------------
2019/03/06
Add source file not in repository
com/pixelmed/dicom/ByteFrameSource.java
---------------------
2019/03/06
Update webstart jarsigner key parameters
Makefile
---------------------
2019/04/16
Assign same Study and Series Instance UIDs to all converted images from single TIFF file (001163)
com/pixelmed/convert/TIFFToDicom.java
---------------------
2019/04/30
Redo removal of Sun signatures from JIIO libraries for web start (001165)
Makefile
---------------------
2019/05/04
Recognize TID 1500 from document title if TID missing (001166)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/05/04
Recognize RFC5646 language tags with pre-coordinated region (001167)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2019/05/04
Update Specimen Context and related context groups (Sup 122)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/05/04
Start work on conversion of SR to/from JSON (incomplete) (001168)
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/test/TestJSONRepresentation.java
com/pixelmed/utils/StringUtilities.java
---------------------
2019/05/04
Allow categorical observations without measurements for ROIs in TID 1500 (CP 1789)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/05/10
Check round trip SR content in pure JSON conversion
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/05/10
2019b data dictionary
com/pixelmed/dicom/elmdict.xml
---------------------
2019/05/10
Correct relationship type for Rendering Intent in test
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/05/10
Add length of encapsulated document to handle when not even (CP 1851)
com/pixelmed/convert/EncapsulateData.java
com/pixelmed/convert/Makefile
com/pixelmed/convert/UnencapsulateData.java
com/pixelmed/dicom/TagFromName.java
---------------------
2019/05/24
JSON SR testing
com/pixelmed/test/Makefile
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
com/pixelmed/test/TestJSON_AllTests.java
---------------------
2019/05/24
Add encapsulation of compressed images in DICOM, since ImageToDicom decompresses input (000219)
com/pixelmed/dicom/EncapsulateImageInDicom.java
com/pixelmed/dicom/Makefile
---------------------
2019/05/28
More work on conversion of SR to/from JSON - children are array to allow duplicate concept names (incomplete) (001168)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/Makefile
---------------------
2019/05/28
More work on conversion of SR to/from JSON - encode attributes of containers but elide continuity that defaults to separate (incomplete) (001168)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/05/28
More work on conversion of SR to/from JSON - encode attributes of containers but elide continuity that defaults to separate (incomplete) (001168)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/06/10
More work on conversion of SR to/from JSON - add support for by reference relationships using simplified labels (supports forward references only on parsing JSON, since single pass); requires detection of attributes preceding actual first entry
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/Makefile
---------------------
2019/06/10
Make StringAttribute.isCharacterInValueValid() static (001170)
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
---------------------
2019/06/10
More work on conversion of SR to/from JSON - more thorough check when guessing composite reference value by checking valid SOP Instance UID, not just recognized SOP Class UID
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/06/11
Remove clinical trial attributes as listed in CP 1860 if requested and in PS3.15 Annex E test (CP 1860)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/test/TestDeidentify.java
---------------------
2019/06/11
Restore VR of Referenced Frame Numbers inadvertently removed in initial CP 1842 application (CP 1842)
com/pixelmed/dicom/elmdict.xml
---------------------
2019/06/11
Clean up file names in test to match method names
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
---------------------
2019/06/11
Revert make StringAttribute.isCharacterInValueValid() static, since static methods are not overridden by sub-classes in Java (001170)
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
---------------------
2019/06/11
Detect planar ROI template when using SCOORD and more than one measurement group (001171)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/06/16
Comment out debugging messages
com/pixelmed/dicom/EncapsulateImageInDicom.java
---------------------
2019/06/16
Add alternate code value and scheme for template concept name to support both SCT and SRT and test with ID 8182 (CP 1850)
com/pixelmed/validate/CommonDicomSRValidationRules.xsl
com/pixelmed/validate/CompileDicomSRDescriptionsIntoXSLT.xsl
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/06/16
Add SCT codes as well as SRT codes to selected context groups - test with context groups invoked by TID 8182 (CP 1850)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2019/06/17
Add SCT codes as well as SRT codes to context groups (CP 1850)
com/pixelmed/validate/DicomContextGroupsSource.xml
---------------------
2019/06/17
Add SCT codes as well as SRT codes to template concept names (CP 1850)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/06/17
Add SCT codes as well as SRT codes to template content item conditions (CP 1850)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/07/03
Add ability to create overlays to store in DICOM file; factored single overlay plane handling out of all overlays class (001172)
com/pixelmed/dicom/EncapsulateImageInDicom.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/SingleOverlay.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestOverlayCreation.java
com/pixelmed/test/TestOverlay_AllTests.java
---------------------
2019/07/03
Tidy up javadoc
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/SingleOverlay.java
---------------------
2019/07/06
Add sRGB ICC profile resource to jar file and use getResourceAsStream() to fetch it since it isn't a file, and add FileUtilities.readAllBytes() to help with that, to prevent TIFFToDicom failing (001173)
Makefile
com/pixelmed/convert/TIFFToDicom.java
com/pixelmed/utils/FileUtilities.java
---------------------
2019/07/21
Add data elements and de-identification for Second Generation Radiotherapy C-Arm RT Treatment Modalities (Sup 175)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/elmdict.xml
---------------------
2019/08/09
More JSON testing with simplified example
com/pixelmed/dicom/Makefile
---------------------
2019/08/09
Consider file extention if unable to get reader for metadata
com/pixelmed/dicom/EncapsulateImageInDicom.java
---------------------
2019/08/09
Add support for changing birth date to DicomCleaner (001174)
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomCleaner.properties
com/pixelmed/display/DicomCleaner_cs.utf-8_properties
com/pixelmed/display/DicomCleaner_da.utf-8_properties
com/pixelmed/display/DicomCleaner_de.utf-8_properties
com/pixelmed/display/DicomCleaner_el.utf-8_properties
com/pixelmed/display/DicomCleaner_es.utf-8_properties
com/pixelmed/display/DicomCleaner_fi.utf-8_properties
com/pixelmed/display/DicomCleaner_fr.utf-8_properties
com/pixelmed/display/DicomCleaner_hu.utf-8_properties
com/pixelmed/display/DicomCleaner_it.utf-8_properties
com/pixelmed/display/DicomCleaner_ja.properties
com/pixelmed/display/DicomCleaner_ja.utf-8_properties
com/pixelmed/display/DicomCleaner_ko.utf-8_properties
com/pixelmed/display/DicomCleaner_nl.utf-8_properties
com/pixelmed/display/DicomCleaner_no.utf-8_properties
com/pixelmed/display/DicomCleaner_pl.utf-8_properties
com/pixelmed/display/DicomCleaner_pt.utf-8_properties
com/pixelmed/display/DicomCleaner_ro.utf-8_properties
com/pixelmed/display/DicomCleaner_ru.utf-8_properties
com/pixelmed/display/DicomCleaner_sv.utf-8_properties
com/pixelmed/display/DicomCleaner_tr.utf-8_properties
com/pixelmed/display/DicomCleaner_zh_CN.utf-8_properties
---------------------
2019/08/10
Correct element descriptions with "Date Time" to "DateTime" (2019d)
com/pixelmed/dicom/elmdict.xml
---------------------
2019/08/10
Prescription and Segment Annotation related Attribute de-identification(CP 1878)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2019/08/11
Use XRESOLUTION to determine PixelSpacing if present and valid (001176)
com/pixelmed/convert/Makefile
com/pixelmed/convert/TIFFImageFileDirectory.java
com/pixelmed/convert/TIFFToDicom.java
---------------------
2019/08/14
Correct element tag for Referenced RT Prescription Sequence
com/pixelmed/dicom/elmdict.xml
---------------------
2019/10/02
Add data elements and de-identify (2019d including Sup 202)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/elmdict.xml
---------------------
2019/10/02
Add edited just number json test case
com/pixelmed/dicom/Makefile
---------------------
2019/10/03
Deploy own lossless JPEG codec with webstart
Makefile
webstart/DicomCleaner.jnlp
webstart/DicomCleanerExperimental.jnlp
webstart/DicomImageBlackout.jnlp
webstart/DicomImageViewer.jnlp
webstart/DicomImageViewerExperimental.jnlp
---------------------
2019/10/28
Use SCT not SRT codes in WSI TIFF to DICOM (001178)
com/pixelmed/convert/TIFFToDicom.java
---------------------
2019/10/28
Use SCT not SRT codes in WSI TIFF to DICOM (001178)
com/pixelmed/convert/Makefile
---------------------
2019/11/02
Add option to omit VR attribute in JSON output, and adapt parser to cope with its absence; also clean up keyword versus hex tag writer to handle private data elements, which always need a tag in the absence of a private element business name (not yet supported)
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/TestJSONRepresentation.java
com/pixelmed/test/TestJSON_AllTests.java
---------------------
2019/11/02
Add collpasing single value unannotated leaf content items into single JSON String rather than JSON Array
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/11/06
Add option to collapse single value arrays without VR in JSON output for data elements, and adapt parser to cope with its absence; make sure not to write (in addition to removving on reading) trailing '.0' for integer numbers so as to assure round trip verification
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/11/28
more uncompressed test images
com/pixelmed/convert/Makefile
---------------------
2019/11/28
2019e data dictionary update
com/pixelmed/dicom/elmdict.xml
---------------------
2019/12/13
Add missing required attributes for VL encapsulated compressed images including LossyImageCompression and empty AcquisitionContextSequence (001179)
com/pixelmed/dicom/EncapsulateImageInDicom.java
com/pixelmed/dicom/Makefile
---------------------
2019/12/13
Add missing required attributes for VL encapsulated compressed images including LossyImageCompression and empty AcquisitionContextSequence (001179)
com/pixelmed/dicom/Makefile
---------------------
2019/12/13
Add missing required attributes for VL encapsulated compressed images including LossyImageCompression and empty AcquisitionContextSequence (001179)
com/pixelmed/dicom/Makefile
---------------------
2019/12/14
Correct detction of TID 1400 inclusion based on single SCOORD presence (001180)
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/12/14
Add code for bounding box for SR and other geometric purposes of region to TID 1410 and 1411(CP 1852)
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2019/12/18
Uncompressed tests on preliminary Leeds animal slide
com/pixelmed/convert/Makefile
---------------------
2019/12/18
Implement recovery of additional IMAGE parameters such as referencedFrameNumber and referencedSegmentNumber, and still detect children at end if present
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/20
Correct known safe private tag for Elscint AcquisitionDuration to match corrected PS3.15 for 2020a
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2019/12/24
More uncompressed WSI tests
com/pixelmed/convert/Makefile
---------------------
2019/12/24
Use reserved word rather than empty string for anonymous concept names for content items
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/24
Use underscope rather than '@' as reserved business name first character
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/24
switch to named content item attributes rather than positional parameters for COMPOSITE and IMAGE (still need to add any WAVEFORM parameter support at all)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/24
switch to named content item attributes rather than positional parameters for SCOORD (still need to add pixel origin and fiducial UID, as well as any SCOORD3D and TCOORD support at all)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/24
Add QIICR LIDC SR to JSON test case
com/pixelmed/dicom/Makefile
---------------------
2019/12/24
switch to named content item attributes rather than positional parameters for NUM using numeric value as value and units as annotations (still need to add other NUM attributes)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/24
Correct known safe private tag for Elscint AcquisitionDuration to match corrected PS3.15 for 2020a
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
---------------------
2019/12/25
Create test adding ModifiedAttributesSequence in OriginalAttributesSequence
com/pixelmed/apps/Makefile
---------------------
2019/12/25
Add option to collapse JSON representation of zero length attributes to null value rather than empty object
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/12/25
Add keyword substitution for UIDs in JSON
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/12/26
If relationship type in business names file is ambiguous, use nothing and apply heuristics, rather than picking first one (e.g., CONTANS vs. SELECTED FROM for IMAGE if concept name present and not anonymous)
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/29
Add disambiguation of relationship type when two choices available for a business name, any child value type of CONTAINER parent used either as CONTAINS or (something other than HAS CONCEPT MOD, HAS ACQ CONTEXT or HAS OBS CONTEXT); use this to handle any child value type used either as CONTAINS or HAS PROPERTIES in business names file; add test sample file for this
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/Makefile
---------------------
2019/12/29
Add SCOORD3D support to JSON
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/29
Disambiguate CONTAINER and one other value type by string value presence; CODE and TEXT by string not in business names file; relationship other than CONTAINS when parent not CONTAINER
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
---------------------
2019/12/29
Add support for reading COMPOSITE value type from JSON
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/Makefile
---------------------
2019/12/30
Add support for JSON String or NUmber for IS, DS (CP 1861) and NUM in SR
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/test/TestJSONRepresentation.java
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
---------------------
2019/12/30
Do not use String for binary integer and float types, even if useNumberForIntegerOrDecimalString false, i.e., binary values are always number per Annex F; add RTSS DS test case with exponential notationthat thwarts round trip string comparisons
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/Makefile
---------------------
2019/12/30
Do not use String for binary integer and float types, even if useNumberForIntegerOrDecimalString false, i.e., binary values are always number per Annex F; add RTSS DS test case with exponential notationthat thwarts round trip string comparisons
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
---------------------
2019/12/30
Use string values for DS and IS in JSON when possible rather than converting through double or long and recreating string ... helps with scientitic notation round trip as long as do not use JSON Number (for which BigDecimal does not help)
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/Makefile
com/pixelmed/test/TestJSONRepresentation.java
---------------------
2019/12/30
Select example for JSON SR that does not need (missing) laterality
com/pixelmed/dicom/Makefile
---------------------
2019/12/30
Do not display parent 'Measurement Group' (001183) and do display value of Finding and Finding Site siblings (001184) in text annotation created by findAllContainedSOPInstances() for SpatialCoordinateAndImageReference used in DicomBrowser
com/pixelmed/dicom/StructuredReport.java
---------------------
2019/12/30
Add additional NUM annotations like rational, etc.
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
---------------------
2019/12/30
Add support for ObservationDateTime and ObservationUID to JSON SR
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
---------------------
2019/12/31
Add methods to set and clear byte offset in SequenceItem, to support tests of list equivalence when byte offset is irrelevant
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/SequenceItem.java
---------------------
2019/12/31
First pass at adding extended code sequence attribute annotations; fixed inadvertant removal of private data elements when creating SR header as well as failure to recognize them (or anything else specified as a hex tag) when checking for unrecognized business names; also improve warnings about unrecognized annotations excluding common annotations that span value types; do not warn about unrecognized value types for children when may be by-reference; update tests accordingly (did not need to clear byte offset after all, nor remove metainformation)
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/test/Makefile
com/pixelmed/test/TestJSONRepresentation.java
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
---------------------
2019/12/31
Clean up business camel case mapping, rename title case method to upper camel case; comment on not messing with case of UCUM units
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/utils/StringUtilities.java
---------------------
2019/12/31
Add more complex JSON SR sample based on QIICR Iowa HN from TCIA
com/pixelmed/dicom/Makefile
---------------------
2019/12/31
Add utility to convert SRT to SCT codes per CP 1850, including extraction of Annex O from PS3.16 as well as manually created list of retired codes that do not appear in Annex O (001185)
com/pixelmed/apps/ConvertSRTCodesToSCT.java
com/pixelmed/apps/Makefile
com/pixelmed/validate/Makefile
com/pixelmed/validate/NOTES
com/pixelmed/validate/retiredsrtnewsctmapping.xml
com/pixelmed/validate/srtsctmapping.xml
---------------------
2019/12/31
Apply conversion of SRT to SCT to QIICR edxample before making JSON
com/pixelmed/apps/Makefile
com/pixelmed/dicom/Makefile
---------------------
2020/01/01
Update copyright
COPYRIGHT
com/pixelmed/anatproc/CTAnatomy.java
com/pixelmed/anatproc/CodedConcept.java
com/pixelmed/anatproc/Combination.java
com/pixelmed/anatproc/CombinedAnatomicConcepts.java
com/pixelmed/anatproc/Concept.java
com/pixelmed/anatproc/DictionaryOfConcepts.java
com/pixelmed/anatproc/DisplayableAnatomicConcept.java
com/pixelmed/anatproc/DisplayableConcept.java
com/pixelmed/anatproc/DisplayableLateralityConcept.java
com/pixelmed/anatproc/DisplayableViewConcept.java
com/pixelmed/anatproc/MammographyLaterality.java
com/pixelmed/anatproc/ProjectionXRayAnatomy.java
com/pixelmed/anatproc/SchemeAndValuePair.java
com/pixelmed/anatproc/package.html
com/pixelmed/apps/AddHierarchicalEvidenceSequencetoStructuredReports.java
com/pixelmed/apps/CheckAllUIDReferencesResolve.java
com/pixelmed/apps/CompressDicomFiles.java
com/pixelmed/apps/Convert8To16Bits.java
com/pixelmed/apps/ConvertNonRGBToRGB.java
com/pixelmed/apps/ConvertPaletteColorToGrayscale.java
com/pixelmed/apps/ConvertPlanarConfiguration.java
com/pixelmed/apps/ConvertSRTCodesToSCT.java
com/pixelmed/apps/CopyOnlyHeadOfMultipleStructuredReportsAndReferences.java
com/pixelmed/apps/DecompressDicomFiles.java
com/pixelmed/apps/DeidentifyAndRedact.java
com/pixelmed/apps/DeidentifyAndRedactWithOriginalFileName.java
com/pixelmed/apps/DoseReporterWithLegacyOCRAndAutoSendToRegistry.java
com/pixelmed/apps/DoseUtility.java
com/pixelmed/apps/DownloadOrTransmit.java
com/pixelmed/apps/FindAndCopySelectedDicomFiles.java
com/pixelmed/apps/FindAndCopySelectedDicomFilesUsingDatabase.java
com/pixelmed/apps/InsertCodeSequence.java
com/pixelmed/apps/InsertRealWorldValueMap.java
com/pixelmed/apps/InstanceReceiver.java
com/pixelmed/apps/IntegerScalingOfFloatingPointPixelData.java
com/pixelmed/apps/KeepOnlyImagePixelModule.java
com/pixelmed/apps/MergeCompositeContext.java
com/pixelmed/apps/MergeCompositeContextForOneEntitySelectively.java
com/pixelmed/apps/MergeFunctionalGroups.java
com/pixelmed/apps/MultiModalitySimulator.java
com/pixelmed/apps/ProcessReceivedWholeSlideImagesMakeTiledPyramidAndSend.java
com/pixelmed/apps/PseudonymizeAndSequester.java
com/pixelmed/apps/RemapFrameOfReferenceUIDs.java
com/pixelmed/apps/RemapUIDs.java
com/pixelmed/apps/RotateFlipSetOfImages.java
com/pixelmed/apps/SetCharacteristicsFromSummary.java
com/pixelmed/apps/StudyReceiver.java
com/pixelmed/apps/SynchronizeFromRemoteSCP.java
com/pixelmed/apps/TabulateSegmentSequence.java
com/pixelmed/apps/TiledPyramid.java
com/pixelmed/apps/TranslateImagePositionPatient.java
com/pixelmed/apps/UIDMapByMatchingPixelData.java
com/pixelmed/apps/WatchFolderAndSend.java
com/pixelmed/apps/package.html
com/pixelmed/convert/AnalyzeException.java
com/pixelmed/convert/AnalyzeHeader.java
com/pixelmed/convert/AnalyzeToDicom.java
com/pixelmed/convert/CommonConvertedAttributeGeneration.java
com/pixelmed/convert/ConvertAmicasJPEG2000FilesetToDicom.java
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/NIfTI1Exception.java
com/pixelmed/convert/NIfTI1Header.java
com/pixelmed/convert/NIfTI1ToDicom.java
com/pixelmed/convert/NRRDException.java
com/pixelmed/convert/NRRDHeader.java
com/pixelmed/convert/NRRDToDicom.java
com/pixelmed/convert/RawImageDescription.java
com/pixelmed/convert/RawRGBInformation.java
com/pixelmed/convert/RawRGBToDicomMultiFrame.java
com/pixelmed/convert/RawToDicomMultiFrame.java
com/pixelmed/convert/TIFFToDicom.java
com/pixelmed/convert/UnencapsulateCompressedPixelData.java
com/pixelmed/convert/package.html
com/pixelmed/database/DatabaseApplicationProperties.java
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DatabaseMediaImporter.java
com/pixelmed/database/DatabaseTreeBrowser.java
com/pixelmed/database/DatabaseTreeModel.java
com/pixelmed/database/DatabaseTreeRecord.java
com/pixelmed/database/DateTimeRangeMatch.java
com/pixelmed/database/DeleteFromDatabase.java
com/pixelmed/database/DicomDatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDatabaseQueryResponseGeneratorFactory.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGenerator.java
com/pixelmed/database/DicomDatabaseRetrieveResponseGeneratorFactory.java
com/pixelmed/database/DicomDictionaryForMinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/DicomDictionaryForStudySeriesInstanceModel.java
com/pixelmed/database/MapTableBrowser.java
com/pixelmed/database/MapTableModel.java
com/pixelmed/database/MinimalPatientStudySeriesInstanceModel.java
com/pixelmed/database/PatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/database/RebuildDatabaseFromInstanceFiles.java
com/pixelmed/database/StudySeriesInstanceModel.java
com/pixelmed/database/StudySeriesInstanceSelectiveMatchModel.java
com/pixelmed/database/package.html
com/pixelmed/dicom/AgeStringAttribute.java
com/pixelmed/dicom/ApplicationEntityAttribute.java
com/pixelmed/dicom/ArrayCopyUtilities.java
com/pixelmed/dicom/AsynchronousOutputStream.java
com/pixelmed/dicom/Attribute.java
com/pixelmed/dicom/AttributeFactory.java
com/pixelmed/dicom/AttributeList.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModel.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelAllFrames.java
com/pixelmed/dicom/AttributeListFunctionalGroupsTableModelOneFrame.java
com/pixelmed/dicom/AttributeListTableBrowser.java
com/pixelmed/dicom/AttributeListTableModel.java
com/pixelmed/dicom/AttributeTag.java
com/pixelmed/dicom/AttributeTagAttribute.java
com/pixelmed/dicom/AttributeTest.java
com/pixelmed/dicom/AttributeTree.java
com/pixelmed/dicom/AttributeTreeBrowser.java
com/pixelmed/dicom/AttributeTreeRecord.java
com/pixelmed/dicom/BinaryInputStream.java
com/pixelmed/dicom/BinaryOutputStream.java
com/pixelmed/dicom/ByteFrameSource.java
com/pixelmed/dicom/ClinicalTrialsAttributes.java
com/pixelmed/dicom/CodeStringAttribute.java
com/pixelmed/dicom/CodedSequenceItem.java
com/pixelmed/dicom/CodingSchemeIdentification.java
com/pixelmed/dicom/CodingSchemeIdentificationItem.java
com/pixelmed/dicom/CoercionModel.java
com/pixelmed/dicom/ColorPalette.java
com/pixelmed/dicom/ColorPaletteHotIron.java
com/pixelmed/dicom/ColorPaletteHotMetalBlue.java
com/pixelmed/dicom/ColorPalettePET.java
com/pixelmed/dicom/ColorPalettePET20Step.java
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/CompressedFrameDecoder.java
com/pixelmed/dicom/CompressedFrameEncoder.java
com/pixelmed/dicom/ContentItem.java
com/pixelmed/dicom/ContentItemFactory.java
com/pixelmed/dicom/ContentItemWithReference.java
com/pixelmed/dicom/ContentItemWithValue.java
com/pixelmed/dicom/CrossSectionalImageLibrary.java
com/pixelmed/dicom/DateAttribute.java
com/pixelmed/dicom/DateTimeAttribute.java
com/pixelmed/dicom/DecimalStringAttribute.java
com/pixelmed/dicom/DescriptionFactory.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/dicom/DicomDictionaryBase.java
com/pixelmed/dicom/DicomDirectory.java
com/pixelmed/dicom/DicomDirectoryBrowser.java
com/pixelmed/dicom/DicomDirectoryRecord.java
com/pixelmed/dicom/DicomDirectoryRecordFactory.java
com/pixelmed/dicom/DicomDirectoryRecordType.java
com/pixelmed/dicom/DicomException.java
com/pixelmed/dicom/DicomFileUtilities.java
com/pixelmed/dicom/DicomInputStream.java
com/pixelmed/dicom/DicomOutputStream.java
com/pixelmed/dicom/DicomStreamCopier.java
com/pixelmed/dicom/DisplayShutter.java
com/pixelmed/dicom/EncapsulateImageInDicom.java
com/pixelmed/dicom/EncapsulatedInputStream.java
com/pixelmed/dicom/FileMetaInformation.java
com/pixelmed/dicom/FloatDoubleAttribute.java
com/pixelmed/dicom/FloatSingleAttribute.java
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/FunctionalGroupUtilities.java
com/pixelmed/dicom/GeometryOfSliceFromAttributeList.java
com/pixelmed/dicom/GeometryOfVolumeFromAttributeList.java
com/pixelmed/dicom/HierarchicalImageReference.java
com/pixelmed/dicom/HierarchicalSOPInstanceReference.java
com/pixelmed/dicom/ImageLibrary.java
com/pixelmed/dicom/ImageReference.java
com/pixelmed/dicom/ImageToDicom.java
com/pixelmed/dicom/InformationEntity.java
com/pixelmed/dicom/IntegerStringAttribute.java
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/LongStringAttribute.java
com/pixelmed/dicom/LongTextAttribute.java
com/pixelmed/dicom/LossyImageCompression.java
com/pixelmed/dicom/MediaImporter.java
com/pixelmed/dicom/ModalityTransform.java
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
com/pixelmed/dicom/MultiFrameImageFactory.java
com/pixelmed/dicom/MultiFramePixelData.java
com/pixelmed/dicom/NullOutputStream.java
com/pixelmed/dicom/OtherAttributeOnDisk.java
com/pixelmed/dicom/OtherByteAttribute.java
com/pixelmed/dicom/OtherByteAttributeCompressedSeparateFramesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleCompressedFrames.java
com/pixelmed/dicom/OtherByteAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherByteAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherByteAttributeOnDisk.java
com/pixelmed/dicom/OtherDoubleAttribute.java
com/pixelmed/dicom/OtherFloatAttribute.java
com/pixelmed/dicom/OtherLongAttribute.java
com/pixelmed/dicom/OtherVeryLongAttribute.java
com/pixelmed/dicom/OtherWordAttribute.java
com/pixelmed/dicom/OtherWordAttributeMultipleFilesOnDisk.java
com/pixelmed/dicom/OtherWordAttributeMultipleFrameArrays.java
com/pixelmed/dicom/OtherWordAttributeOnDisk.java
com/pixelmed/dicom/Overlay.java
com/pixelmed/dicom/PDFToDicomImage.java
com/pixelmed/dicom/PersonIdentification.java
com/pixelmed/dicom/PersonNameAttribute.java
com/pixelmed/dicom/PixelSpacing.java
com/pixelmed/dicom/PrivatePixelData.java
com/pixelmed/dicom/ProjectionXRayImageLibrary.java
com/pixelmed/dicom/RealWorldValueTransform.java
com/pixelmed/dicom/SOPClass.java
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/SOPInstanceReference.java
com/pixelmed/dicom/SUVTransform.java
com/pixelmed/dicom/SequenceAttribute.java
com/pixelmed/dicom/SequenceItem.java
com/pixelmed/dicom/SetOfDicomFiles.java
com/pixelmed/dicom/SetOfFrameSets.java
com/pixelmed/dicom/ShortStringAttribute.java
com/pixelmed/dicom/ShortTextAttribute.java
com/pixelmed/dicom/SignedLongAttribute.java
com/pixelmed/dicom/SignedShortAttribute.java
com/pixelmed/dicom/SignedVeryLongAttribute.java
com/pixelmed/dicom/SingleOverlay.java
com/pixelmed/dicom/SpatialCoordinateAndImageReference.java
com/pixelmed/dicom/SpecificCharacterSet.java
com/pixelmed/dicom/SpectroscopyVolumeLocalization.java
com/pixelmed/dicom/StackOfSlices.java
com/pixelmed/dicom/StandaloneAttributeTreeBrowser.java
com/pixelmed/dicom/StoredFilePathStrategy.java
com/pixelmed/dicom/StoredFilePathStrategyComponentFolders.java
com/pixelmed/dicom/StoredFilePathStrategyHashSubFolders.java
com/pixelmed/dicom/StoredFilePathStrategySingleFolder.java
com/pixelmed/dicom/StringAttribute.java
com/pixelmed/dicom/StringAttributeAffectedBySpecificCharacterSet.java
com/pixelmed/dicom/StructuredReport.java
com/pixelmed/dicom/StructuredReportBrowser.java
com/pixelmed/dicom/StructuredReportTreeBrowser.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/TextAttribute.java
com/pixelmed/dicom/TiledFramesIndex.java
com/pixelmed/dicom/TimeAttribute.java
com/pixelmed/dicom/TransferSyntax.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/dicom/UIDGenerator.java
com/pixelmed/dicom/UnPackBits.java
com/pixelmed/dicom/UniqueIdentifierAttribute.java
com/pixelmed/dicom/UniversalResourceAttribute.java
com/pixelmed/dicom/UnknownAttribute.java
com/pixelmed/dicom/UnlimitedCharactersAttribute.java
com/pixelmed/dicom/UnlimitedTextAttribute.java
com/pixelmed/dicom/UnsignedLongAttribute.java
com/pixelmed/dicom/UnsignedShortAttribute.java
com/pixelmed/dicom/UnsignedVeryLongAttribute.java
com/pixelmed/dicom/VOITransform.java
com/pixelmed/dicom/ValueRepresentation.java
com/pixelmed/dicom/VersionAndConstants.java
com/pixelmed/dicom/Veterinary.java
com/pixelmed/dicom/XMLRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/XMLRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/dicom/package.html
com/pixelmed/display/ApplicationFrame.java
com/pixelmed/display/BufferedImageUtilities.java
com/pixelmed/display/ChestImageViewer.java
com/pixelmed/display/ConsumerFormatImageMaker.java
com/pixelmed/display/DemographicAndTechniqueAnnotations.java
com/pixelmed/display/DescribeGraphicsEnvironment.java
com/pixelmed/display/DialogMessageLogger.java
com/pixelmed/display/DicomBrowser.java
com/pixelmed/display/DicomCleaner.java
com/pixelmed/display/DicomImageBlackout.java
com/pixelmed/display/DicomImageViewer.java
com/pixelmed/display/DisplayDeviceArea.java
com/pixelmed/display/DisplayDicomDirectoryBrowser.java
com/pixelmed/display/DisplayStructuredReportBrowser.java
com/pixelmed/display/DisplayedAreaSelection.java
com/pixelmed/display/DrawingUtilities.java
com/pixelmed/display/IconDemographicAndTechniqueAnnotations.java
com/pixelmed/display/IconListBrowser.java
com/pixelmed/display/ImageEditUtilities.java
com/pixelmed/display/ImageLocalizerManager.java
com/pixelmed/display/LocalizerManager.java
com/pixelmed/display/MammoDemographicAndTechniqueAnnotations.java
com/pixelmed/display/MammoImageViewer.java
com/pixelmed/display/OrientationAnnotations.java
com/pixelmed/display/PlotGraph.java
com/pixelmed/display/SafeCursorChanger.java
com/pixelmed/display/SafeFileChooser.java
com/pixelmed/display/SafeProgressBarUpdaterThread.java
com/pixelmed/display/SingleImagePanel.java
com/pixelmed/display/SingleImagePanelWithLineDrawing.java
com/pixelmed/display/SingleImagePanelWithRegionDetection.java
com/pixelmed/display/SingleImagePanelWithRegionDrawing.java
com/pixelmed/display/SourceImage.java
com/pixelmed/display/SourceImageGraphicDisplaySelectorPanel.java
com/pixelmed/display/SourceImageShutterSelectorPanel.java
com/pixelmed/display/SourceImageSortOrderPanel.java
com/pixelmed/display/SourceImageSubset.java
com/pixelmed/display/SourceImageVOILUTSelectorPanel.java
com/pixelmed/display/SourceImageWindowLinearCalculationSelectorPanel.java
com/pixelmed/display/SourceImageWindowingAccelerationSelectorPanel.java
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/SourceSpectra.java
com/pixelmed/display/SourceSpectrumSortOrderPanel.java
com/pixelmed/display/SpectraPanel.java
com/pixelmed/display/SpectroscopyLocalizerManager.java
com/pixelmed/display/StatusBarManager.java
com/pixelmed/display/SuperimposedDicomImage.java
com/pixelmed/display/SuperimposedDicomSegments.java
com/pixelmed/display/SuperimposedImage.java
com/pixelmed/display/TestApp.java
com/pixelmed/display/TestAppMultiFile.java
com/pixelmed/display/TestAppMultiFrame.java
com/pixelmed/display/TestAppMultiFrameCompare.java
com/pixelmed/display/TestAppMultiFrameStackMode.java
com/pixelmed/display/TextAnnotation.java
com/pixelmed/display/TextAnnotationPositioned.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
com/pixelmed/display/WindowCenterAndWidth.java
com/pixelmed/display/package.html
com/pixelmed/display/event/ApplyShutterChangeEvent.java
com/pixelmed/display/event/BrowserPaneChangeEvent.java
com/pixelmed/display/event/FrameSelectionChangeEvent.java
com/pixelmed/display/event/FrameSortOrderChangeEvent.java
com/pixelmed/display/event/GraphicDisplayChangeEvent.java
com/pixelmed/display/event/RegionSelectionChangeEvent.java
com/pixelmed/display/event/SourceImageSelectionChangeEvent.java
com/pixelmed/display/event/SourceSpectrumSelectionChangeEvent.java
com/pixelmed/display/event/StatusChangeEvent.java
com/pixelmed/display/event/TaskChangeEvent.java
com/pixelmed/display/event/VOIFunctionChangeEvent.java
com/pixelmed/display/event/WellKnownContext.java
com/pixelmed/display/event/WindowCenterAndWidthChangeEvent.java
com/pixelmed/display/event/WindowLinearCalculationChangeEvent.java
com/pixelmed/display/event/WindowingAccelerationValueChangeEvent.java
com/pixelmed/display/event/package.html
com/pixelmed/displaywave/DicomSourceECG.java
com/pixelmed/displaywave/ECGPanel.java
com/pixelmed/displaywave/ECGViewer.java
com/pixelmed/displaywave/RawSourceECG.java
com/pixelmed/displaywave/SCPSourceECG.java
com/pixelmed/displaywave/SourceECG.java
com/pixelmed/displaywave/package.html
com/pixelmed/dose/CTAcquisitionParameters.java
com/pixelmed/dose/CTDose.java
com/pixelmed/dose/CTDoseAcquisition.java
com/pixelmed/dose/CTDoseCheckDetails.java
com/pixelmed/dose/CTIrradiationEventDataFromImages.java
com/pixelmed/dose/CTPhantomType.java
com/pixelmed/dose/CTScanType.java
com/pixelmed/dose/CommonDoseObserverContext.java
com/pixelmed/dose/DeviceParticipant.java
com/pixelmed/dose/DoseCompositeInstanceContext.java
com/pixelmed/dose/PersonParticipant.java
com/pixelmed/dose/RadiationDoseStructuredReport.java
com/pixelmed/dose/RadiationDoseStructuredReportFactory.java
com/pixelmed/dose/RecordingDeviceObserverContext.java
com/pixelmed/dose/RoleInOrganization.java
com/pixelmed/dose/RoleInProcedure.java
com/pixelmed/dose/ScanRange.java
com/pixelmed/dose/ScopeOfDoseAccummulation.java
com/pixelmed/dose/SourceOfDoseInformation.java
com/pixelmed/dose/package.html
com/pixelmed/doseocr/ExposureDoseSequence.java
com/pixelmed/doseocr/GenerateRadiationDoseStructuredReport.java
com/pixelmed/doseocr/LegacyRadiationDoseOCRDicomForwardingService.java
com/pixelmed/doseocr/OCR.java
com/pixelmed/doseocr/RenderedDoseReport.java
com/pixelmed/doseocr/TestOCRAgainstTabulatedData.java
com/pixelmed/doseocr/package.html
com/pixelmed/event/ApplicationEventDispatcher.java
com/pixelmed/event/Event.java
com/pixelmed/event/EventContext.java
com/pixelmed/event/EventDispatcher.java
com/pixelmed/event/Listener.java
com/pixelmed/event/SelfRegisteringListener.java
com/pixelmed/ftp/FTPApplicationProperties.java
com/pixelmed/ftp/FTPClientApplicationConfigurationDialog.java
com/pixelmed/ftp/FTPException.java
com/pixelmed/ftp/FTPFileSender.java
com/pixelmed/ftp/FTPRemoteHost.java
com/pixelmed/ftp/FTPRemoteHostConfigurationDialog.java
com/pixelmed/ftp/FTPRemoteHostInformation.java
com/pixelmed/ftp/FTPSecurityType.java
com/pixelmed/ftp/package.html
com/pixelmed/geometry/GeometryOfSlice.java
com/pixelmed/geometry/GeometryOfVolume.java
com/pixelmed/geometry/IntersectSlice.java
com/pixelmed/geometry/IntersectVolume.java
com/pixelmed/geometry/LocalizerPoster.java
com/pixelmed/geometry/LocalizerPosterFactory.java
com/pixelmed/geometry/ProjectSlice.java
com/pixelmed/geometry/package.html
com/pixelmed/hl7/v2/HL7Message.java
com/pixelmed/network/AAbortPDU.java
com/pixelmed/network/AReleaseException.java
com/pixelmed/network/AReleasePDU.java
com/pixelmed/network/AbstractSyntaxSelectionPolicy.java
com/pixelmed/network/AnyExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/AnyExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/ApplicationEntity.java
com/pixelmed/network/ApplicationEntityConfigurationDialog.java
com/pixelmed/network/ApplicationEntityMap.java
com/pixelmed/network/AssociateAcceptPDU.java
com/pixelmed/network/AssociateRejectPDU.java
com/pixelmed/network/AssociateRequestAcceptPDU.java
com/pixelmed/network/AssociateRequestPDU.java
com/pixelmed/network/Association.java
com/pixelmed/network/AssociationAcceptor.java
com/pixelmed/network/AssociationFactory.java
com/pixelmed/network/AssociationInitiator.java
com/pixelmed/network/AssociationOutputStream.java
com/pixelmed/network/AssociationStatusHandler.java
com/pixelmed/network/CEchoRequestCommandMessage.java
com/pixelmed/network/CEchoResponseCommandMessage.java
com/pixelmed/network/CFindRequestCommandMessage.java
com/pixelmed/network/CFindResponseCommandMessage.java
com/pixelmed/network/CGetRequestCommandMessage.java
com/pixelmed/network/CGetResponseCommandMessage.java
com/pixelmed/network/CMoveRequestCommandMessage.java
com/pixelmed/network/CMoveResponseCommandMessage.java
com/pixelmed/network/CStoreRequestCommandMessage.java
com/pixelmed/network/CStoreResponseCommandMessage.java
com/pixelmed/network/CommandMessage.java
com/pixelmed/network/CompositeInstanceStoreAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeInstanceStoreFindMoveGetAbstractSyntaxSelectionPolicy.java
com/pixelmed/network/CompositeResponseHandler.java
com/pixelmed/network/DicomNetworkException.java
com/pixelmed/network/FindSOPClassSCU.java
com/pixelmed/network/GetSOPClassSCU.java
com/pixelmed/network/IdentifierHandler.java
com/pixelmed/network/IdentifierMessage.java
com/pixelmed/network/MessageServiceElementCommand.java
com/pixelmed/network/MoveSOPClassSCU.java
com/pixelmed/network/MultipleInstanceTransferStatusHandler.java
com/pixelmed/network/MultipleInstanceTransferStatusHandlerWithFileName.java
com/pixelmed/network/NetworkApplicationConfigurationDialog.java
com/pixelmed/network/NetworkApplicationInformation.java
com/pixelmed/network/NetworkApplicationInformationFederated.java
com/pixelmed/network/NetworkApplicationProperties.java
com/pixelmed/network/NetworkConfigurationFromLDAP.java
com/pixelmed/network/NetworkConfigurationFromMulticastDNS.java
com/pixelmed/network/NetworkConfigurationSource.java
com/pixelmed/network/NetworkDefaultValues.java
com/pixelmed/network/NetworkMediaImporter.java
com/pixelmed/network/NetworkUtilities.java
com/pixelmed/network/PDataPDU.java
com/pixelmed/network/PresentationAddress.java
com/pixelmed/network/PresentationContext.java
com/pixelmed/network/PresentationContextListFactory.java
com/pixelmed/network/PresentationContextSelectionPolicy.java
com/pixelmed/network/PresentationDataValue.java
com/pixelmed/network/ProbeCapability.java
com/pixelmed/network/ReceivedDataHandler.java
com/pixelmed/network/ReceivedFilePathStrategy.java
com/pixelmed/network/ReceivedObjectHandler.java
com/pixelmed/network/RequestCommandMessage.java
com/pixelmed/network/ResponseStatus.java
com/pixelmed/network/SCUSCPRoleSelection.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/network/StorageSOPClassSCPDispatcher.java
com/pixelmed/network/StorageSOPClassSCU.java
com/pixelmed/network/StorageSOPClassSCUPerformanceTest.java
com/pixelmed/network/TestSendingCommandAndDataInOnePDU.java
com/pixelmed/network/TransferSyntaxSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStoreFindMoveGetPresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitStorePresentationContextSelectionPolicy.java
com/pixelmed/network/UnencapsulatedExplicitTransferSyntaxSelectionPolicy.java
com/pixelmed/network/VerificationSOPClassSCU.java
com/pixelmed/network/package.html
com/pixelmed/query/FilterPanel.java
com/pixelmed/query/QueryInformationModel.java
com/pixelmed/query/QueryResponseGenerator.java
com/pixelmed/query/QueryResponseGeneratorFactory.java
com/pixelmed/query/QueryTreeBrowser.java
com/pixelmed/query/QueryTreeModel.java
com/pixelmed/query/QueryTreeRecord.java
com/pixelmed/query/RetrieveResponseGenerator.java
com/pixelmed/query/RetrieveResponseGeneratorFactory.java
com/pixelmed/query/StudyRootQueryInformationModel.java
com/pixelmed/query/package.html
com/pixelmed/scpecg/DefaultHuffmanTable.java
com/pixelmed/scpecg/HuffmanDecoder.java
com/pixelmed/scpecg/HuffmanTable.java
com/pixelmed/scpecg/RecordHeader.java
com/pixelmed/scpecg/SCPECG.java
com/pixelmed/scpecg/SCPTree.java
com/pixelmed/scpecg/SCPTreeBrowser.java
com/pixelmed/scpecg/SCPTreeRecord.java
com/pixelmed/scpecg/Section.java
com/pixelmed/scpecg/Section0.java
com/pixelmed/scpecg/Section1.java
com/pixelmed/scpecg/Section10.java
com/pixelmed/scpecg/Section2.java
com/pixelmed/scpecg/Section3.java
com/pixelmed/scpecg/Section4.java
com/pixelmed/scpecg/Section5Or6.java
com/pixelmed/scpecg/Section7.java
com/pixelmed/scpecg/Section8Or11.java
com/pixelmed/scpecg/SectionHeader.java
com/pixelmed/scpecg/package.html
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/package.html
com/pixelmed/slf4j/Logger.java
com/pixelmed/slf4j/LoggerFactory.java
com/pixelmed/slf4j/package.html
com/pixelmed/test/TestAgeCalculation.java
com/pixelmed/test/TestAnatomyCombined.java
com/pixelmed/test/TestAnatomyConcept.java
com/pixelmed/test/TestAnatomyFind.java
com/pixelmed/test/TestAnatomy_AllTests.java
com/pixelmed/test/TestAttributeListReadTerminationStrategy.java
com/pixelmed/test/TestAttributeListReadUnspecifiedShortAttribute.java
com/pixelmed/test/TestAttributeListWriteAndReadMetaInformation.java
com/pixelmed/test/TestAttributeListWriteAndReadTextAttribute.java
com/pixelmed/test/TestAttributeList_AllTests.java
com/pixelmed/test/TestBase64_AllTests.java
com/pixelmed/test/TestBase64_RoundTrip.java
com/pixelmed/test/TestBinaryAttributeBinaryInputOutput.java
com/pixelmed/test/TestBinaryAttribute_AllTests.java
com/pixelmed/test/TestCMove.java
com/pixelmed/test/TestCStore.java
com/pixelmed/test/TestCStore_AETs.java
com/pixelmed/test/TestCStore_ConvertTransferSyntaxes.java
com/pixelmed/test/TestCTAcquisitionParameters.java
com/pixelmed/test/TestCTDose.java
com/pixelmed/test/TestCTDoseAcquisition.java
com/pixelmed/test/TestCTDose_AllTests.java
com/pixelmed/test/TestCTIrradiationEventDataFromImages.java
com/pixelmed/test/TestCTPhantomType.java
com/pixelmed/test/TestCTScanType.java
com/pixelmed/test/TestCapabilitiesAbsent_AllTests.java
com/pixelmed/test/TestCapabilitiesCodecsAbsent.java
com/pixelmed/test/TestCapabilitiesCodecsPresent.java
com/pixelmed/test/TestCapabilitiesPresent_AllTests.java
com/pixelmed/test/TestCharacterSetStringAttribute.java
com/pixelmed/test/TestCharacterSetTextAttribute.java
com/pixelmed/test/TestCharacterSet_AllTests.java
com/pixelmed/test/TestCleanerReceiveAndClean.java
com/pixelmed/test/TestCleaner_AllTests.java
com/pixelmed/test/TestCodeContentItemValueMatching.java
com/pixelmed/test/TestCodedSequenceItemGetCodeMeaning.java
com/pixelmed/test/TestCodedSequenceItemParseStringTuple.java
com/pixelmed/test/TestCodedSequenceItem_AllTests.java
com/pixelmed/test/TestCodingSchemeIdentification.java
com/pixelmed/test/TestCodingScheme_AllTests.java
com/pixelmed/test/TestColorConversions_AllTests.java
com/pixelmed/test/TestColorConversions_SRGB_CIELabPCS.java
com/pixelmed/test/TestCommonDoseObserverContext.java
com/pixelmed/test/TestCompositeInstanceContext.java
com/pixelmed/test/TestCompositeInstanceContext_AllTests.java
com/pixelmed/test/TestContentItem_AllTests.java
com/pixelmed/test/TestDatabaseDateTimeConversionInsertion.java
com/pixelmed/test/TestDatabase_AllTests.java
com/pixelmed/test/TestDateTimeAttributeTimeSinceEpochExtraction.java
com/pixelmed/test/TestDateTimeAttributeTimeZone.java
com/pixelmed/test/TestDateTimeAttribute_AllTests.java
com/pixelmed/test/TestDates_AllTests.java
com/pixelmed/test/TestDecimalStringAttributeLocaleEffect.java
com/pixelmed/test/TestDecimalStringAttribute_AllTests.java
com/pixelmed/test/TestDecompressedImagePixelModuleAndLossyImageCompressionHistory.java
com/pixelmed/test/TestDeidentify.java
com/pixelmed/test/TestDeidentifyStructuredContent.java
com/pixelmed/test/TestDeidentify_AllTests.java
com/pixelmed/test/TestDeviceParticipant.java
com/pixelmed/test/TestDicomDirectoryRecordFactory.java
com/pixelmed/test/TestDicomDirectoryRecordSortOrder.java
com/pixelmed/test/TestDicomDirectory_AllTests.java
com/pixelmed/test/TestDicomFileUtilities_AllTests.java
com/pixelmed/test/TestDicomNetwork_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_AllTests.java
com/pixelmed/test/TestDicomStreamCopier_ConvertTransferSyntaxes.java
com/pixelmed/test/TestFloatFormatterLocaleEffect.java
com/pixelmed/test/TestFloatFormatter_AllTests.java
com/pixelmed/test/TestGeometryOfSlice.java
com/pixelmed/test/TestGeometry_AllTests.java
com/pixelmed/test/TestGetPrivateFromAttributeList.java
com/pixelmed/test/TestGetPrivate_AllTests.java
com/pixelmed/test/TestHierarchicalFileName.java
com/pixelmed/test/TestHierarchicalFileName_AllTests.java
com/pixelmed/test/TestIsDicomFile.java
com/pixelmed/test/TestJSONRepresentation.java
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
com/pixelmed/test/TestJSON_AllTests.java
com/pixelmed/test/TestLaterality.java
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
com/pixelmed/test/TestMultiFrameImageFactory_AllTests.java
com/pixelmed/test/TestNumericContentItemFloatingAndRational.java
com/pixelmed/test/TestNumericContentItemLocaleEffect.java
com/pixelmed/test/TestOverlayCreation.java
com/pixelmed/test/TestOverlay_AllTests.java
com/pixelmed/test/TestPackBits_AllTests.java
com/pixelmed/test/TestPackBits_UnPack.java
com/pixelmed/test/TestPatientAgeWhenRemoveIdentifyingAttributes.java
com/pixelmed/test/TestPersonParticipant.java
com/pixelmed/test/TestPrivateCreatorValueRepresentation.java
com/pixelmed/test/TestRecordingDeviceObserverContext.java
com/pixelmed/test/TestRemoveIdentifyingAttributes.java
com/pixelmed/test/TestRemoveIdentifyingAttributes_AllTests.java
com/pixelmed/test/TestRepairAttributeValues.java
com/pixelmed/test/TestRepairAttributeValues_AllTests.java
com/pixelmed/test/TestRoleInOrganization.java
com/pixelmed/test/TestRoleInProcedure.java
com/pixelmed/test/TestSUVTransformValues.java
com/pixelmed/test/TestSUVTransform_AllTests.java
com/pixelmed/test/TestSafePrivateGEDoseRelated.java
com/pixelmed/test/TestSafePrivateGEMRRelated.java
com/pixelmed/test/TestSafePrivateGEPACSRelated.java
com/pixelmed/test/TestSafePrivateNQResultsRelated.java
com/pixelmed/test/TestSafePrivatePhilipsDoseRelated.java
com/pixelmed/test/TestSafePrivatePhilipsPETRelated.java
com/pixelmed/test/TestSafePrivateSiemensUltrasoundRawDataRelated.java
com/pixelmed/test/TestSafePrivate_AllTests.java
com/pixelmed/test/TestScanRange.java
com/pixelmed/test/TestScopeOfDoseAccummulation.java
com/pixelmed/test/TestSequenceAttributeDelimitedString.java
com/pixelmed/test/TestSequenceAttributeModifiedOriginalAttributes.java
com/pixelmed/test/TestSequenceAttributeStringsWithinItems.java
com/pixelmed/test/TestSequenceAttribute_AllTests.java
com/pixelmed/test/TestSourceOfDoseInformation.java
com/pixelmed/test/TestSpatialCoordinates3DContentItemLocaleEffect.java
com/pixelmed/test/TestSpatialCoordinatesContentItemLocaleEffect.java
com/pixelmed/test/TestStringUtilities.java
com/pixelmed/test/TestStringUtilities_AllTests.java
com/pixelmed/test/TestStructuredReport_AllTests.java
com/pixelmed/test/TestStructuredReport_XMLRepresentation.java
com/pixelmed/test/TestSuitableCharacterSet.java
com/pixelmed/test/TestThreadUtilitiesEventDispatchThread.java
com/pixelmed/test/TestThreadUtilities_AllTests.java
com/pixelmed/test/TestUUIDBasedOID.java
com/pixelmed/test/TestUUIDBasedOID_AllTests.java
com/pixelmed/test/TestUnknownAttributeBinaryValueExtraction.java
com/pixelmed/test/TestUnknownAttribute_AllTests.java
com/pixelmed/test/TestUnknownSequenceValueRepresentation.java
com/pixelmed/test/UserInterfaceUtilities.java
com/pixelmed/test/package.html
com/pixelmed/transfermonitor/MonitoredInputStream.java
com/pixelmed/transfermonitor/MonitoredOutputStream.java
com/pixelmed/transfermonitor/TransferMonitor.java
com/pixelmed/transfermonitor/TransferMonitoringContext.java
com/pixelmed/utils/Base64.java
com/pixelmed/utils/ByteArray.java
com/pixelmed/utils/CapabilitiesAvailable.java
com/pixelmed/utils/ColorUtilities.java
com/pixelmed/utils/CopyStream.java
com/pixelmed/utils/DateUtilities.java
com/pixelmed/utils/FileReaper.java
com/pixelmed/utils/FileUtilities.java
com/pixelmed/utils/FilenameFilterByCaseInsensitiveSuffix.java
com/pixelmed/utils/FloatFormatter.java
com/pixelmed/utils/HexDump.java
com/pixelmed/utils/MACAddress.java
com/pixelmed/utils/MessageLogger.java
com/pixelmed/utils/PdfDecoder.java
com/pixelmed/utils/PdfException.java
com/pixelmed/utils/PhoneticStringEncoder.java
com/pixelmed/utils/PhoneticStringEncoderException.java
com/pixelmed/utils/PrintStreamMessageLogger.java
com/pixelmed/utils/ScrollingTextAreaWriter.java
com/pixelmed/utils/StringUtilities.java
com/pixelmed/utils/ThreadUtilities.java
com/pixelmed/utils/UUIDBasedOID.java
com/pixelmed/utils/XPathQuery.java
com/pixelmed/utils/package.html
com/pixelmed/validate/CompileXSLTIntoTranslet.java
com/pixelmed/validate/DicomInstanceValidator.java
com/pixelmed/validate/DicomSRValidator.java
com/pixelmed/validate/ExecuteTranslet.java
com/pixelmed/validate/package.html
com/pixelmed/web/AppletDisplayRequestHandler.java
com/pixelmed/web/HttpServer.java
com/pixelmed/web/ImageDisplayRequestHandler.java
com/pixelmed/web/InstanceListRequestHandler.java
com/pixelmed/web/PathRequestHandler.java
com/pixelmed/web/PatientListRequestHandler.java
com/pixelmed/web/RequestHandler.java
com/pixelmed/web/RequestTypeServer.java
com/pixelmed/web/SeriesListRequestHandler.java
com/pixelmed/web/StudyListRequestHandler.java
com/pixelmed/web/WadoRequest.java
com/pixelmed/web/WadoRequestHandler.java
com/pixelmed/web/WadoServer.java
com/pixelmed/web/WebRequest.java
com/pixelmed/web/WebServerApplicationProperties.java
com/pixelmed/web/package.html
---------------------
2020/01/01
Encode component groups separately in JSON for PNAME
com/pixelmed/dicom/JSONRepresentationOfDicomObjectFactory.java
com/pixelmed/dicom/JSONRepresentationOfStructuredReportObjectFactory.java
com/pixelmed/test/TestJSONRepresentationOfStructuredReport.java
---------------------
2020/01/03
Add some SuperimposedDicomSegments test cases that don't work because of orientation issues
com/pixelmed/convert/Makefile
com/pixelmed/display/Makefile
---------------------
2020/01/09
Unresolved concern over Analyze orientation interpretation (001188)
com/pixelmed/convert/AnalyzeToDicom.java
---------------------
2020/01/09
Unresolved concern over Analyze orientation interpretation (001188); clean up other Analyze conversion tests including restored avg152T1_LR-marked
com/pixelmed/convert/Makefile
---------------------
2020/01/10
Restore ability to subclass list of tags in specialized DicomDictionary broken by switch to loading from XML resource (001190), which manifested as failure to count instances etc. in C-FIND response (001189), whixh has no also been made robust to empty information in database if attributes are present in database; also improve debugging messages in various related classes
com/pixelmed/database/DatabaseInformationModel.java
com/pixelmed/database/DicomDatabaseQueryResponseGenerator.java
com/pixelmed/database/DicomDictionaryForPatientStudySeriesConcatenationInstanceModel.java
com/pixelmed/dicom/DicomDictionary.java
com/pixelmed/network/StorageSOPClassSCP.java
com/pixelmed/server/DicomAndWebStorageServer.java
com/pixelmed/server/Makefile
---------------------
2020/01/20
Correct code meaning of (113723, DCM, "Calibration DateTime") per CP 1545
com/pixelmed/validate/DicomSRDescriptionsSource.xml
---------------------
2020/01/23
Add Additional Teaching File Information template and context groups from IHE RAD TF Vol 3 Annex H
com/pixelmed/validate/DicomContextGroupsSource.xml
com/pixelmed/validate/DicomSRDescriptionsSource.xml
com/pixelmed/validate/Makefile
---------------------
2020/01/25
Update SCT SRT mapping (2020a Annex O update)
com/pixelmed/validate/srtsctmapping.xml
---------------------
2020/02/05
Show keyword or name of Transfer Syntax and Abstract Syntax rather than just UID in Association debug messages (001192)
com/pixelmed/dicom/SOPClassDescriptions.java
com/pixelmed/dicom/TransferSyntaxFromName.java
com/pixelmed/network/PresentationContext.java
---------------------
2020/02/05
Process pending responses in C-GET SCU (001193)
com/pixelmed/network/GetSOPClassSCU.java
---------------------
2020/02/05
More debugging messages in Presentation Context creation logic
com/pixelmed/network/PresentationContextListFactory.java
---------------------
2020/02/05
Multi-energy CT de-identification (CP 1928)
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2020/02/07
When making MultiFrame, separate on different ConvolutionKernel (001196)
com/pixelmed/dicom/FrameSet.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/07
Add test flags to allow random order of encoded frame pixel data (001198) and omission of stack information (001199) in FrameContentSequence; also update use of deprecated AttributeList.write() method and document that output TS is EVRLE, and test with examples from dcm2niix experience
com/pixelmed/dicom/Makefile
com/pixelmed/dicom/MultiFrameImageFactory.java
---------------------
2020/02/07
Add test flags to allow random order of encoded frame pixel data (001198) and omission of stack information (001199) in FrameContentSequence; also update use of deprecated AttributeList.write() method and document that output TS is EVRLE, and test with examples from dcm2niix experience
com/pixelmed/test/TestMultiFrameImageFactoryDateTime.java
---------------------
2020/02/14
Add known safe Eigen Artemis prostate biopsy system private data elements
com/pixelmed/dicom/ClinicalTrialsAttributes.java
---------------------
2020/02/17
Correct min/max row and column setting to not override superclass values, otherwise frames slider replacement or removal sometimes not performed (001201)
com/pixelmed/display/SourceInstanceSortOrderPanel.java
com/pixelmed/display/TiledSourceImageSortOrderPanel.java
---------------------
2020/02/17
Add special case for TiledIndex creation when only single frame, to handle LABEL that has extent less than total pixel matrix (001200)
com/pixelmed/dicom/TiledFramesIndex.java
---------------------
2020/02/18
Include experimental support to include DateTime in Series folder name and include InConcatenationNumber (if present) with InstanceNumber when renaming
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2020/02/18
Include experimental support to include DateTime in Series folder name and include InConcatenationNumber (if present) with InstanceNumber when renaming
com/pixelmed/dicom/MoveDicomFilesIntoHierarchy.java
---------------------
2020/02/22
Alternative Calender and Archeological Patient (CP 1492), and add TypeOfPatientID missing from PatientModule in CompositeContext
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/dicom/elmdict.xml
com/pixelmed/dicom/elmdictie.xml
---------------------
2020/02/22
Add attributes to CompositeContext from Identification of groups of pre-clinical research small animal subjects (CP 1457)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add attributes to CompositeContext from Consent for distribution and ethics committee approval (CP 942)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
make all deprecated TagFromName data elements final like all the others, since some were not
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add attributes to CompositeContext from Add Consulting Physician (CP 1322)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add attributes related to patient size to CompositeContext from CT Protocol Storage (Sup 121)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add other patient study attributes related to CompositeContext from CT Protocol Storage (Sup 121)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add study and series level clinical trial module attributes to composite context (patient/subject was already handled) (001202)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
com/pixelmed/test/TestCompositeInstanceContext.java
---------------------
2020/02/22
Add General Series Module attributes to composite context from CT Protocol Storage (Sup 121)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add attributes to CompositeContext from Add UDI (Universal Device ID) to objects (CP 1418) and Unique device identification consistency and de-identification (CP 1856)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add InstanceCoercionDateTime to composite context from Instance Creation Date and Time not changed on coercion (CP 1216)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add attributes to CompositeContext from Add Equivalent Scope Code (CP 1539)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/22
Add to composite context Longitudinal Temporal Information Modified to SOP Common (Sup 142), QueryRetrieveView, ConversionSourceAttributesSequence per Multi-Frame Converted Legacy Images (Sup 157), ContentQualification per Add Content Qualification to all Composite IODs (CP 1356), PrivateDataElementCharacteristicsSequence per Add attributes describing safe or unsafe private elements (CP 1411), InstanceOriginStatus per Add flag to distinguish studies imported from outside (CP 1760) and BarcodeValue per Add Barcode Value to Modality Worklist for WSI (CP 1828)
com/pixelmed/dicom/CompositeInstanceContext.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/27
Update retired SRT to SCT code mapping (001185) and update test diffs
com/pixelmed/apps/Makefile
com/pixelmed/validate/retiredsrtnewsctmapping.xml
---------------------
2020/02/28
Set Image and Frame Type to DERIVED and RESAMPLED when creating downsampled tiled pyramid (001075)
com/pixelmed/apps/Makefile
com/pixelmed/apps/TiledPyramid.java
com/pixelmed/dicom/TagFromName.java
---------------------
2020/02/28
Use RCT not ICT when making J2K tiled pyramids to match what codec actually does (001204)
com/pixelmed/apps/TiledPyramid.java
---------------------
2020/02/29
Add source image reference in DerivationImageSequence and Common Instance Reference Module to derived tiled pyramid (001205)
com/pixelmed/apps/TiledPyramid.java
---------------------
2020/03/01
More debugging messages
com/pixelmed/apps/Makefile
com/pixelmed/apps/TiledPyramid.java
---------------------
2020/03/24
Use SCT not SRT codes in Segmentation (001206)
com/pixelmed/convert/IndexedLabelMapToSegmentation.java
com/pixelmed/convert/Makefile
---------------------
2020/03/25
Shorten ContentLabel string in prostate diagnosis segmentation sample to fit in CS VR
com/pixelmed/convert/Makefile
---------------------
2020/03/28
During lossless redaction of lossy JPEG, replace block value with neutral gray rather than average for block (001207)
Makefile.common.mk
com/pixelmed/apps/Makefile
lib/additional/pixelmed_codec.jar
lib/additional/pixelmed_imageio.jar
---------------------
2020/03/28
Restore production paths to codecs after experiments
Makefile.common.mk
---------------------
2020/04/16
Update windows JRE to jre1.8.0_251
windows/Makefile
windows/jre1.8.0_211-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip(DEAD)
windows/jre1.8.0_251-windows-i586_plus_jai_imageio-1_1-lib-windows-i586-jre_asinstalled.zip
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