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Author: Dylan Aïssi
Description: Fix spelling error.
Last-Update: 2016-10-11
Forwarded: no
--- a/dosage.cpp
+++ b/dosage.cpp
@@ -1258,7 +1258,7 @@
+ " markers, " + int2str( totCount )
+ " across all files\n");
if ( nonF == 0 )
- printLOG("All SNPs occured exactly once in all files\n");
+ printLOG("All SNPs occurred exactly once in all files\n");
else
printLOG("Note: " + int2str(nonF) + " SNPs did not occur exactly once per file\n");
--- a/gvar.cpp
+++ b/gvar.cpp
@@ -586,7 +586,7 @@
if ( true )
{
- printLOG("Writing frequency & genotyping informtion to [ "
+ printLOG("Writing frequency & genotyping information to [ "
+ par::output_file_name
+ ".gvar.summary ]\n");
GOUT.open( ( par::output_file_name
--- a/model.cpp
+++ b/model.cpp
@@ -165,7 +165,7 @@
void Model::addDominanceSNP(int d)
{
if ( ! has_snps )
- error("Cannot add SNP to thie MODEL");
+ error("Cannot add SNP to this MODEL");
dominance.push_back(d);
--- a/binput.cpp
+++ b/binput.cpp
@@ -471,10 +471,10 @@
// If 0.99 file format
if ( (!v1_bfile) && ( b[1] || b[2] || b[3] || b[4] || b[5] || b[6] || b[7] ) )
{
- printLOG("\n *** Possible problem: guessing that BED is < v0.99 *** \n");
- printLOG(" *** High chance of data corruption, spurious results *** \n");
- printLOG(" *** Unles you are _sure_ this really is an old BED file *** \n");
- printLOG(" *** you should recreate PED -> BED *** \n\n");
+ printLOG("\n *** Possible problem: guessing that BED is < v0.99 *** \n");
+ printLOG(" *** High chance of data corruption, spurious results *** \n");
+ printLOG(" *** Unless you are _sure_ this really is an old BED file *** \n");
+ printLOG(" *** you should recreate PED -> BED *** \n\n");
bfile_SNP_major = false;
BIT.close();
--- a/sets.cpp
+++ b/sets.cpp
@@ -812,7 +812,7 @@
void Set::profileTestInitialise()
{
- PP->printLOG("Initalising profile-based set test\n");
+ PP->printLOG("Initialising profile-based set test\n");
// Set up the mapping to determine which set(s)
// a given SNP is in
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