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Source: plink2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Dylan Aïssi <daissi@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
help2man,
libatlas-base-dev,
liblapack-dev,
libzstd-dev (>= 1.4.4),
zlib1g-dev,
libsimde-dev,
libdeflate-dev
Standards-Version: 4.6.1
Vcs-Browser: https://salsa.debian.org/med-team/plink2
Vcs-Git: https://salsa.debian.org/med-team/plink2.git
Homepage: https://www.cog-genomics.org/plink/2.0/
Rules-Requires-Root: no
Package: plink2
Architecture: any
Depends: ${misc:Depends},
${shlibs:Depends}
Built-Using: ${simde:Built-Using}
Description: whole-genome association analysis toolset
plink expects as input the data from SNP (single nucleotide polymorphism)
chips of many individuals and their phenotypical description of a disease.
It finds associations of single or pairs of DNA variations with a phenotype
and can retrieve SNP annotation from an online source.
.
SNPs can evaluated individually or as pairs for their association with the
disease phenotypes. The joint investigation of copy number variations is
supported. A variety of statistical tests have been implemented.
.
plink2 is a comprehensive update of plink and plink1.9 with new algorithms
and new methods, faster and less memory consumer than the first plink.
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