1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
|
Source: plip
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Alexandre Mestiashvili <alex@biotec.tu-dresden.de>
Section: python
Testsuite: autopkgtest
Priority: optional
Build-Depends: debhelper (>= 9),
dh-python,
help2man,
pymol,
python-all,
python-lxml,
python-numpy,
python-openbabel,
python-setuptools
Standards-Version: 3.9.8
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/plip.git
Vcs-Git: https://anonscm.debian.org/git/debian-med/plip.git
Homepage: https://projects.biotec.tu-dresden.de/plip-web/plip/
Package: plip
Architecture: all
Depends: pymol,
${misc:Depends},
${python:Depends}
Description: fully automated protein-ligand interaction profiler
The Protein-Ligand Interaction Profiler (PLIP) is a tool to analyze
and visualize protein-ligand interactions in PDB files.
.
Features include:
* Detection of eight different types of noncovalent interactions
* Automatic detection of relevant ligands in a PDB file
* Direct download of PDB structures from wwPDB server if valid
PDB ID is given
* Processing of custom PDB files containing protein-ligand complexes
(e.g. from docking)
* No need for special preparation of a PDB file, works out of the box
* Atom-level interaction reports in rST and XML formats for easy parsing
* Generation of PyMOL session files (.pse) for each pairing, enabling easy
preparation of images for publications and talks
* Rendering of preview image for each ligand and its interactions
with the protein
|
