File: db_insert.rules

package info (click to toggle)
polymake 4.14-2
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 35,888 kB
  • sloc: cpp: 168,933; perl: 43,407; javascript: 31,575; ansic: 3,007; java: 2,654; python: 632; sh: 268; xml: 117; makefile: 61
file content (252 lines) | stat: -rw-r--r-- 9,237 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
#  Copyright (c) 1997-2024
#  Ewgenij Gawrilow, Michael Joswig, and the polymake team
#  Technische Universität Berlin, Germany
#  https://polymake.org
#
#  This program is free software; you can redistribute it and/or modify it
#  under the terms of the GNU General Public License as published by the
#  Free Software Foundation; either version 2, or (at your option) any
#  later version: http://www.gnu.org/licenses/gpl.txt.
#
#  This program is distributed in the hope that it will be useful,
#  but WITHOUT ANY WARRANTY; without even the implied warranty of
#  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
#  GNU General Public License for more details.
#-------------------------------------------------------------------------------
#
#  This file is part of the polymake database interface polyDB.
#
#   @author Andreas Paffenholz
#   (c) 2015 - 2023
#   https://polydb.org
#   https://www.mathematik.tu-darmstadt.de/~paffenholz
#

use namespaces qw(+ PolyDB);

CREDIT PolyDB

package PolyDB::Collection;

# @category Database Collection Administration
# Common options for database insertions
options %insert_options = (
   # Bool use_schema use the schema for to collection stored in the database 
   # to project the object so that it contains 
   # precisely the required properties
   use_schema => true,
   # HASH schema provide a schema for the object
   schema => undef, 
   # HASH info provide all meta infmation for the object
   info => undef, 
   # String creation_date specify a creation date, can also be set in info, object, or current date will be used
   # precedence options > info > object > current date
   creation_date => undef, 
   # String uri A uri with a description of the object and the collection it belongs to, can also be set in object or collection info
   # precedence options > info > object
   uri => undef,
   # String polymake_version The minimal version needed to read the object from the database, can also be set in collection info
   # precedence: options > info > current version
   polymake_version => undef,
   # Bool verbose if true provides some status output for the insert
   verbose => false
);

# @category Database Collection Administration
# Additional options if objects are added one by one
options %insert_one_options = (
   %insert_options,
   # String id provide an id for the object to be written. 
   # Can only be used if a single object is written into the database. 
   # If not given, or for arrays of objects the name of the object is used as id
   id => undef, 
   # Bool noinsert if true the object is only prepared according to the schema, 
   # but not written into the database
   # useful for testing
   noinsert => false 
);

sub prepare_schema_and_info {
   my ($self, $options) = @_;

   $options->{use_schema} = false if defined($options->{schema});
   if ($options->{use_schema} ) {
      croak "options use_schema and info cannot be used together\n"   if defined($options->{info});
      croak "options use_schema and schema cannot be used together\n" if defined($options->{schema});

      $options->{info}   = $self->get_info();
      $options->{schema} = $self->get_schema();

      $options->{creation_date} //= $options->{info}->{creation_date};
      $options->{uri} //= $options->{info}->{uri};
      $options->{polymake_version} //= $options->{info}->{polymake_version};
   }
}

sub prepare_metadata {
   my ($self, $obj, $options) = @_;
   my $metadata = $obj->get_attachment("polyDB");   
   ($metadata->{section}, $metadata->{collection}) = $self->name =~ /([\w.]+)\.([\w-]+)/;
   if ( defined($options->{uri}) ) {
      $metadata->{uri} = $options->{uri};
   }
   if ( defined($options->{creation_date}) ) {
      $metadata->{creation_date} = $options->{creation_date};
   }
   $metadata->{creation_date} //= get_date();
   $metadata->{version} = $PolyDB::default::db_polydb_version;

   $obj->remove_attachment("polyDB");
   $obj->attach("_polyDB",$metadata);
}


###########

# @category Database Collection Administration
# Insert one object into the collection
# @param Core::BigObject object to be inserted 
# @options %insert_one_options
user_method insert_one($, %insert_one_options) {
   my ($self, $obj, $options) = @_;

   # prepare schema and info
   prepare_schema_and_info($self,$options);

   # prepare metadata
   prepare_metadata($self, $obj, $options);

   # serialize the polymake object
   my $polymake_object = $options->{schema} ? Core::Serializer::serialize($obj, { schema => $options->{schema} } ) : Core::Serializer::serialize($obj);

   # set the id, if given
   if ( defined($options->{id}) ) { $polymake_object->{_id} = $options->{id}; }

   # adjust the polymake version, so that the object can be read by older polymake versions
   $polymake_object->{_ns}->{polymake}->[1] = $options->{polymake_version} // $Polymake::Version;

   # insert into polydb
   my $json = JSON->new;
   $options->{noinsert} || $self->collection->insert_one($json->encode($polymake_object));
}

method plain_insert_one {
   my ($self, $obj, $options) = @_;

   # prepare metadata
   prepare_metadata($self, $obj, $options);

   # serialize the polymake object
   my $polymake_object = $options->{schema} ? Core::Serializer::serialize($obj, { schema => $options->{schema} } ) : Core::Serializer::serialize($obj);

   # set the id, if given
   if ( defined($options->{id}) ) { $polymake_object->{_id} = $options->{id}; }

   # adjust the polymake version, so that the object can be read by older polymake versions
   $polymake_object->{_ns}->{polymake}->[1] = $options->{polymake_version} // $Polymake::Version;

   # insert into polydb
   my $json = JSON->new;
   $options->{noinsert} || $self->collection->insert_one($json->encode($polymake_object));
}


# @category Database Collection Administration
# Insert one object into the collection
# @param Core::BigObject array of objects to be inserted 
# @options %insert_options
user_method insert_many($, %insert_options) {
   my ($self, $obj_array_ref, $options) = @_;

   # prepare schema and info
   prepare_schema_and_info($self,$options);

   my $metadata = ();
   ($metadata->{section}, $metadata->{collection}) = $self->name =~ /([\w.]+)\.([\w-]+)/;
   if ( defined($options->{uri}) ) {
      $metadata->{uri} = $options->{uri};
   }

   $metadata->{creation_date} = defined($options->{creation_date}) ? $options->{creation_date} : get_date();
   $metadata->{version} = $PolyDB::default::db_polydb_version;

   my $json = JSON->new;
   my $polymake_object_array = [];
   foreach my $obj (@$obj_array_ref) {
      print "adding ".$obj->name."\n" if $options->{verbose};
      $obj->remove_attachment("polyDB");
      $obj->attach("_polyDB",$metadata);
      my $polymake_object = $options->{schema} ? Core::Serializer::serialize($obj, { schema => $options->{schema} } ) : Core::Serializer::serialize($obj);
      $polymake_object->{_ns}->{polymake}->[1] = $options->{polymake_version} // $Polymake::Version;
      $polymake_object->{_id} = $obj->name; # objects must have a unique name in the collection. This is not checked!
      push @$polymake_object_array, $json->encode($polymake_object);
   }

   print "writing to database\n" if $options->{verbose};
   $self->collection->insert_many($polymake_object_array);
}

# @category Database Collection Administration
# Replaces one object in the collection based on the id
# @param Core::BigObject object to be inserted 
# @options %insert_one_options
user_method replace_one($, %insert_one_options) {
   my ($self, $obj, $options) = @_;

   # prepare schema and info
   prepare_schema_and_info($self,$options);

   # prepare metadata
   prepare_metadata($self, $obj, $options);

   # serialize the polymake object
   my $polymake_object = $options->{schema} ? Core::Serializer::serialize($obj, { schema => $options->{schema} } ) : Core::Serializer::serialize($obj);

   # set the id, if given
   if ( defined($options->{id}) ) { $polymake_object->{_id} = $options->{id}; }

   # adjust the polymake version, so that the object can be read by older polymake versions
   $polymake_object->{_ns}->{polymake}->[1] = $options->{polymake_version} // $Polymake::Version;

   # insert into polydb
   my $json = JSON->new;
   $options->{noinsert} || $self->collection->replace_one($json->encode($polymake_object));
}

# @category Database Collection Administration
# Remove one object from a collection identified by its id
# @param String id the id of the object to remove
user_method remove_one($) {
   my ($self, $id) = @_;
   $self->collection->delete_one($id);
}

# @category Database Collection Administration
# Remove all objects from a collection matching the given filter, default is all
user_method remove_all(;$) {
   my ($self, $filter) = @_;

   $filter = {} if not defined($filter);
   my $json = JSON->new;
   $self->collection->delete_many($json->encode($filter));
}

user_method update_one(;$$) {
   my ($self, $id, $update) = @_;

   my $filter = {
      "_id" => $id,
   };

   my $json = JSON->new;
   $json->convert_blessed(1);
   $self->collection->update_one($json->encode($filter), $json->encode($update));
}



# Local Variables:
# mode: perl
# cperl-indent-level:3
# indent-tabs-mode:nil
# End: