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Source: poretools
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
Afif Elghraoui <afif@debian.org>
Build-Depends:
debhelper (>= 9),
dh-python,
python-all,
python-setuptools,
python-h5py (>= 2.2),
python-matplotlib,
python-seaborn,
python-pandas,
Standards-Version: 3.9.8
Homepage: http://poretools.readthedocs.org
Vcs-Git: https://anonscm.debian.org/git/debian-med/poretools.git
Vcs-Browser: https://anonscm.debian.org/cgit/debian-med/poretools.git
Package: poretools
Architecture: all
Depends:
${misc:Depends},
${python:Depends},
python-pkg-resources
Description: toolkit for nanopore nucleotide sequencing data
poretools is a flexible toolkit for exploring datasets generated by nanopore
sequencing devices from MinION for the purposes of quality control and
downstream analysis. Poretools operates directly on the native FAST5 (a
variant of the HDF5 standard) file format produced by ONT and provides a
wealth of format conversion utilities and data exploration and visualization
tools.
Package: poretools-data
Architecture: all
Depends: ${misc:Depends}
Description: toolkit for nanopore nucleotide sequencing data -- sample datasets
poretools is a flexible toolkit for exploring datasets generated by nanopore
sequencing devices from MinION for the purposes of quality control and
downstream analysis. Poretools operates directly on the native FAST5 (a
variant of the HDF5 standard) file format produced by ONT and provides a
wealth of format conversion utilities and data exploration and visualization
tools.
.
This package provides example nanopore sequencing data in fast5 format.
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