1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
|
Source: pplacer
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Shayan Doust <hello@shayandoust.me>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-ocaml,
ocaml-nox,
ocamlbuild,
libcsv-ocaml-dev,
libxmlm-ocaml-dev,
libbatteries-ocaml-dev,
libmcl-ocaml-dev,
libocamlgsl-ocaml-dev,
libsqlite3-ocaml-dev,
libzip-ocaml-dev,
mcl,
libounit-ocaml-dev
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/pplacer
Vcs-Git: https://salsa.debian.org/med-team/pplacer.git
Homepage: https://github.com/matsen/pplacer
Rules-Requires-Root: no
Package: pplacer
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends}
Description: phylogenetic placement and downstream analysis
Pplacer places reads on a phylogenetic tree. guppy (Grand Unified
Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool
for working with reference packages.
.
Pplacer places query sequences on a fixed reference phylogenetic tree to
maximize phylogenetic likelihood or posterior probability according to a
reference alignment. Pplacer is designed to be fast, to give useful
information about uncertainty, and to offer advanced visualization and
downstream analysis.
|
