File: openmpi5.patch

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Description: remove inclusion of mpicxx.h.
 The header is not provided by openmpi 5 anymore, resulting in several
 instances of:
 .
  /<<PKGBUILDDIR>>/src/cxx/libraries/prime/MpiMCMC.cc:11:10: fatal error: mpicxx.h: No such file or directory
     11 | #include "mpicxx.h"
        |          ^~~~~~~~~~
 .
 It seems that plain drop of the header file is sufficient to put the
 build back on tracks.
Author: Étienne Mollier <emollier@debian.org>
Bug-Debian: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1086370
Forwarded: no
Last-Update: 2024-11-03
---
This patch header follows DEP-3: http://dep.debian.net/deps/dep3/
--- prime-phylo.orig/src/cxx/libraries/prime/MpiMCMC.cc
+++ prime-phylo/src/cxx/libraries/prime/MpiMCMC.cc
@@ -8,7 +8,6 @@
 #include "MpiMCMC.hh"
 #include "MCMCModel.hh"
 #include "MCMCObject.hh"
-#include "mpicxx.h"
 #include "PRNG.hh"
 
 
--- prime-phylo.orig/src/cxx/libraries/prime/MpiMultiGSR.cc
+++ prime-phylo/src/cxx/libraries/prime/MpiMultiGSR.cc
@@ -9,7 +9,6 @@
 #include "Probability.hh"
 #include "TreeIO.hh"
 #include "TreeIOTraits.hh"
-#include "mpicxx.h"
 #include "TreePerturbationEvent.hh"
 #include <iostream>
 #include <sstream>
--- prime-phylo.orig/src/cxx/libraries/prime/MultiGSR.cc
+++ prime-phylo/src/cxx/libraries/prime/MultiGSR.cc
@@ -9,7 +9,6 @@
 #include "Probability.hh"
 #include "TreeIO.hh"
 #include "TreeIOTraits.hh"
-#include "mpicxx.h"
 #include "TreePerturbationEvent.hh"
 #include <iostream>
 #include <sstream>