File: proalign

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proalign 0.603-2
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  • area: main
  • in suites: stretch
  • size: 480 kB
  • ctags: 847
  • sloc: java: 8,673; sh: 15; makefile: 9
file content (21 lines) | stat: -rw-r--r-- 502 bytes parent folder | download | duplicates (2) 
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#!/bin/sh

PARA=$@

if [ -z $JAVA_HOME ]; then
        java=java
else
        java=$JAVA_HOME/bin/java
fi

if [ -x /usr/share/proalign ]; then
        if [ -r /usr/share/proalign/ProAlign.jar  ]; then 
                #cd /usr/share/proalign && $java -jar ProAlign.jar
                $java -jar /usr/share/proalign/ProAlign.jar $PARA
        else 
                echo "Could not find /usr/share/proalign/ProAlign.jar"
        fi
else 
        echo "Could not find /usr/share/proalign directory."
fi