File: run-unit-test

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probalign 1.4-10
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  • in suites: bookworm, forky, sid, trixie
  • size: 368 kB
  • sloc: cpp: 4,964; makefile: 27; sh: 12
file content (18 lines) | stat: -rw-r--r-- 401 bytes parent folder | download | duplicates (2) 
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#!/bin/sh -e

pkg=probalign

if [ "$AUTOPKGTEST_TMP" = "" ] ; then
  AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX)
  trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM
fi

cd $AUTOPKGTEST_TMP

cp -a /usr/share/doc/${pkg}/test_data* .
gunzip -r *

probalign -T 5 test_data_p.fas
probalign -nuc test_data_n.fas
probalign -v -go 20 test_data_p.fas
probalign -nuc -a -ge 0.75 test_data_n.fas