File: profnet.spec

package info (click to toggle)
profnet 1.0.22-4
  • links: PTS, VCS
  • area: main
  • in suites: stretch
  • size: 1,956 kB
  • ctags: 926
  • sloc: fortran: 12,103; makefile: 200; perl: 124; sh: 20; csh: 6
file content (187 lines) | stat: -rw-r--r-- 3,912 bytes parent folder | download | duplicates (6)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
Summary: neural network architectures for Rost Lab prediction methods
Name: profnet
Version: 1.0.20
Release: 1
License: GPL
Group: Applications/Science
Source: ftp://rostlab.org/%{name}/%{name}-%{version}.tar.gz
URL: http://rostlab.org/
BuildRoot: %{_tmppath}/%{name}-%{version}-root
BuildRequires: gcc-gfortran, rsync

%define common_desc Profnet is a component of the prediction methods that make up the \
 Predict Protein service by the lab of Burkhard Rost. It provides the neural \
 network component to a variety of predictors that perform protein feature \
 prediction directly from sequence.  This neural network implementation has \
 to be compiled for every different network architecture.

%description
 %{common_desc}

%package bval
Summary: neural network architecture for profbval
Group: Applications/Science

%description bval
 %{common_desc}
 .
 This package contains the neural network architecture for profbval.

%package chop
Summary: neural network architecture for profchop
Group: Applications/Science

%description chop
 %{common_desc}
 .
 This package contains the neural network architecture for profchop.

%package con
Summary: neural network architecture for profcon
Group: Applications/Science

%description con
 %{common_desc}
 .
 This package contains the neural network architecture for profcon.

%package isis
Summary: neural network architecture for profisis
Group: Applications/Science

%description isis
 %{common_desc}
 .
 This package contains the neural network architecture for profisis.

%package md
Summary: neural network architecture for metadisorder
Group: Applications/Science

%description md
 %{common_desc}
 .
 This package contains the neural network architecture for metadisorder.

%package norsnet
Summary: neural network architecture for norsnet
Group: Applications/Science

%description norsnet
 %{common_desc}
 .
 This package contains the neural network architecture for norsnet.

%package prof
Summary: neural network architecture for profacc
Group: Applications/Science

%description prof
 %{common_desc}
 .
 This package contains the neural network architecture for profacc.

%package snapfun
Summary: neural network architecture for snapfun
Group: Applications/Science

%description snapfun
 %{common_desc}
 .
 This package contains the neural network architecture for snapfun.

%package phdnet
Summary: neural network architecture for profphd
Group: Applications/Science

%description phdnet
 %{common_desc}
 .
 This package contains the neural network architecture for profphd.

%prep
%setup -q

%build
make prefix=%{_prefix}

%install
rm -rf $RPM_BUILD_ROOT
make DESTDIR=%{buildroot} prefix=%{_prefix} install

%clean
rm -rf $RPM_BUILD_ROOT

%files
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING

%files bval
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_bval
%{_mandir}/*/profnet_bval*

%files chop
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_chop
%{_mandir}/*/profnet_chop*

%files con
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_con
%{_mandir}/*/profnet_con*

%files isis
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_isis
%{_mandir}/*/profnet_isis*

%files md
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_md
%{_mandir}/*/profnet_md*

%files norsnet
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_norsnet
%{_mandir}/*/profnet_norsnet*

%files prof
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_prof
%{_mandir}/*/profnet_prof*

%files snapfun
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profnet_snapfun
%{_mandir}/*/profnet_snapfun*

%files phdnet
%defattr(-,root,root)
%doc AUTHORS
%doc COPYING
%{_bindir}/profphd_net
%{_bindir}/phd1994
%{_mandir}/*/profphd_net*
%{_mandir}/*/phd1994*

%changelog
* Fri Jun 17 2011 Laszlo Kajan <lkajan@rostlab.org> - 1.0.rg1-1
- First rpm package