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#!/bin/env perl
##!/usr/local/bin/perl -w
#
#
$scrName=$0;$scrName=~s/^.*\/|\.pl//g;
$scrGoal="compile PHD FORTRAN tools programs (convert_seq, filter_hssp)";
#$scrGoal="compile PHD FORTRAN tools programs (convert_seq, filter_hssp, maxhom ?)";
#
#
$[ =1 ;
$dirMake= "mat/";
# for PHD
$fileMake{"convert"}="make_convert_seq.ARCH";
$fileMake{"filter"}= "make_filter_hssp.ARCH";
# for TOPITS
$fileMake{"metr2st"}="make_metr2st_make.ARCH";
# for MaxHom
$fileMake{"maxhom"}= "make_maxhom.ARCH";
$fileMake{"profile"}="make_profile_make.ARCH";
$exe{"convert"}= "convert_seq.". "ARCH";
$exe{"filter"}= "filter_hssp.". "ARCH";
$exe{"metr2st"}= "metr2st_make.". "ARCH";
$exe{"maxhom"}= "maxhom.". "ARCH";
$exe{"profile"}= "profile_make.". "ARCH";
$LnotMaxhome= 1;
#$LnotMaxhome= 0;
@all=("convert","filter","metr2st","maxhom","profile");
# ------------------------------
if ($#ARGV<1){ # help
print "goal: $scrGoal\n";
print "use: '$scrName <auto|filter|convert|metr2st|maxhom|profile>'\n";
print "opt: (pass the following arguments like '$scrName arg=val')\n";
# 'keyword' 'value' 'description'
printf " %-12s=%-10s %-22s %-s\n","." x 10, "." x 10, "." x 15, "." x 20;
printf " %-12s=%-10s %-22s %-s\n","keyword", "value", "default", "explanation";
printf " %-12s=%-10s %-22s %-s\n","." x 10, "." x 10, "." x 15, "." x 20;
printf " %-12s=%-10s %-22s %-s\n","ARCH", "ALPHA", "",
"system arch: SGI64|SGI32|SGI5|ALPHA|SUNMP";
printf " %-12s=%-10s %-22s %-s\n","dir", "mat",$dirMake, "directory with make file";
foreach $kwd (@all){
next if ($LnotMaxhom && $kwd eq "maxhom");
printf " %-12s=%-10s %-22s %-s\n","exe_".$kwd,"x", $exe{$kwd}, "name of executable"; }
foreach $kwd (@all){
next if ($LnotMaxhom && $kwd eq "maxhom");
printf " %-12s=%-10s %-22s %-s\n","make_".$kwd,"x", $fileMake{$kwd},"make file";}
foreach $kwd (@all){
next if ($LnotMaxhom && $kwd eq "maxhom");
printf " %-12s %-10s %-22s %-s\n",$kwd, "no value", "1","compiles $kwd";}
exit;
}
foreach $kwd (@all) {
$do{$kwd}=0;}
$Lopted=0;
# ------------------------------
# read command line
foreach $arg (@ARGV){
next if ($arg eq $ARGV[1] && $arg =~ /^(auto|do)$/);
if ($arg=~/^ARCH=(.*)$/i) { $ARCH=$1;}
elsif ($arg=~/^make_(.*)=(.*)$/) { $fileMake{$1}=$2;}
elsif ($arg=~/^exe_(.*)=(.*)$/) { $exe{$1}=$2;}
elsif ($arg=~/^conv(ert)?$/) { $do{"convert"}=1; $Lopted=1;}
elsif ($arg=~/^fil(ter)?$/) { $do{"filter"}= 1; $Lopted=1;}
elsif ($arg=~/^metr(2st)?$/) { $do{"metr2st"}=1; $Lopted=1;}
elsif ($arg=~/^max(hom)?$/) { $do{"maxhom"}= 1; $Lopted=1;}
elsif ($arg=~/^prof(ile)?$/) { $do{"profile"}=1; $Lopted=1;}
elsif ($arg=~/^dir=(.*)$/) { $dirMake=$1;}
# elsif ($arg=~/^=(.*)$/){ $=$1;}
else { print "*** ERROR $scrName: wrong command line arg '$arg'\n";
die;}}
$ARCH= $ARCH || $ENV{'ARCH'};
$dirMake.="/" if ($dirMake !~/\// && length($dirMake)>=1);
if (! defined $ARCH) {
$ansr=
&get_in_keyboardLoc("ARCH","",$scrName);
$ARCH=$ansr; }
if ($ARCH !~ /ALPHA|SGI(64|32|5)|SUNMP|SUN4SOL|LINUX/){
print "--- $scrName: ARCH must be either of the following :\n";
print "--- "." " x length($scrName)." ALPHA|SGI64|SGI32|SGI5|SUNMP|SUN4SOL\n";
$ansr=
&get_in_keyboardLoc("ARCH","",$scrName);
$ARCH=$ansr; }
if ($ARCH !~ /ALPHA|SGI(64|32|5)|SUNMP|SUN4SOL|LINUX/){
print "*** ERROR $scrName: ARCH really must be either of the following :\n";
print "*** "." " x length($scrName)." ALPHA|SGI64|SGI32|SGI5|SUNMP|SUN4SOL\n";
die; }
# default: do all 3 compilations
if (! $Lopted){
foreach $kwd (@all){
next if ($LnotMaxhom && $kwd eq "maxhom");
$do{$kwd}=1;}}
foreach $kwd (@all) {
next if (! $do{$kwd});
$fileMake{$kwd}=~s/ARCH/$ARCH/ if ($fileMake{$kwd} =~ /ARCH/);
$fileMake{$kwd}=$dirMake.$fileMake{$kwd} if ($fileMake{$kwd} !~ /$dirMake/);
$fileMake=$fileMake{$kwd};
undef $exeOut;
if (defined $exe{$kwd}) {
$exeOut= $exe{$kwd};
$exeOut=~s/ARCH/$ARCH/ if ($exeOut=~/ARCH/);}
$exeDef= "convert_seq.". $ARCH if ($kwd eq "convert");
$exeDef= "filter_hssp.". $ARCH if ($kwd eq "filter");
$exeDef= "maxhom." . $ARCH if ($kwd eq "maxhom");
$exeDef= "metr2st_make.".$ARCH if ($kwd eq "metr2st");
$exeDef= "profile_make.".$ARCH if ($kwd eq "profile");
# local copy of make file
$fileMakeTmp="make_".$kwd."_tmp_".$$.".".$ARCH;
print "--- $scrName: system '\\cp $fileMake $fileMakeTmp '\n";
system("\\cp $fileMake $fileMakeTmp");
# compile
print "--- $scrName: system 'make -f $fileMakeTmp'\n";
system("make -f $fileMakeTmp");
if (-e $exeDef && defined $exeOut && ($exeDef ne $exeOut)) {
print "--- $scrName: system '\\mv $exeDef $exeOut'\n";
system("\\mv $exeDef $exeOut");
$exeDef=$exeOut; }
print "--- $scrName: expected executable: $exeDef\n" if (-e $exeDef);
if (! -e $exeDef) {
print "*** ERROR $scrName: never made '$exeDef'\n";
print "*** keyword assigned to executable?? check code!\n";}
unlink($fileMakeTmp);
}
exit;
#===============================================================================
sub get_in_keyboardLoc {
local($des,$def,$pre,$Lmirror)=@_;local($txt);
#--------------------------------------------------------------------------------
# get_in_keyboardLoc gets info from keyboard
# in: $des : keyword to get
# in: $def : default settings
# in: $pre : text string beginning screen output
# default '--- '
# in: $Lmirror: if true, the default is mirrored
# out: $val : value obtained
#--------------------------------------------------------------------------------
$pre= "---" if (! defined $pre);
$Lmirror=0 if (! defined $Lmirror || ! $Lmirror);
$txt=""; # ini
printf "%-s %-s\n", $pre,"-" x (79 - length($pre));
printf "%-s %-15s:%-s\n", $pre,"type value for",$des;
if (defined $def){
printf "%-s %-15s:%-s\n",$pre,"type RETURN to enter value, or to keep default";
printf "%-s %-15s>%-s\n",$pre,"default value",$def;}
else {
printf "%-s %-15s>%-s\n",$pre,"type RETURN to enter value"; }
$txt=$def if ($Lmirror); # mirror it
printf "%-s %-15s>%-s", $pre,"type",$txt;
while(<STDIN>){
$txt.=$_;
last if ($_=~/\n/);} $txt=~s/^\s+|\s+$//g;
$txt=$def if (length($txt) < 1);
printf "%-s %-15s>%-s\n", $pre,"--> you chose",$txt;
return ($txt);
} # end of get_in_keyboardLoc
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