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#!/bin/bash
# Copyright (c) 2013-2020, SIB - Swiss Institute of Bioinformatics and
# Biozentrum - University of Basel
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
# Wrapper script that dispatches the actions to the actual Python script. It
# autodetects the most important directories and sets LD_LIBRARY_PATH and
# friends.
# EXIT CODES
# If an action is started, returns with the code of this action
# 1 - not enough arguments
if test $# == 0 ; then
echo "Usage:"
echo " promod <action>"
echo ""
echo "type 'promod help' to get a list of commonly used actions"
exit 1
fi
SCRIPT_NAME=$0
BIN_DIR=$( cd `dirname "$SCRIPT_NAME"`; pwd)
export OST_ROOT="@OST_ROOT@"
export PROMOD3_ROOT=$(dirname "$BIN_DIR")
export PROMOD3_SHARED_DATA_PATH="$PROMOD3_ROOT/share/promod3"
PROMOD3_EXEC_PATH="$PROMOD3_ROOT/@LIBEXECPATH@"
# export PYTHONPATH="@OST_PYMOD_PATH@:${PROMOD3_ROOT}/@LIBDIR@/@PYTHON_MODULE_PATH@:${PYTHONPATH}"
# export PATH="$BIN_DIR:${OST_ROOT}/bin:$PATH"
# export LD_LIBRARY_PATH="${PROMOD3_ROOT}/@LIBDIR@:${OST_ROOT}/lib64:$LD_LIBRARY_PATH"
# retrieve absolute path to python executable
pyexec=python3
ACTION="$1"
PROMOD3_SCRIPT="${PROMOD3_EXEC_PATH}/pm-${ACTION}"
shift
if test -e "${PROMOD3_SCRIPT}" ; then
$pyexec "${PROMOD3_SCRIPT}" $@
else
ACTION_BASENAME=`basename "$ACTION"`
case "$ACTION_BASENAME" in
*.py ) $pyexec "$ACTION" $@;;
* ) echo "Unknown action '${ACTION}'"
echo "type 'promod help' to get started"
exit 1 ;;
esac
fi
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