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Source: provean
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
Andrius Merkys <merkys@debian.org>,
Build-Depends:
cd-hit,
debhelper-compat (= 13),
ncbi-blast+,
Standards-Version: 4.6.1
Homepage: http://provean.jcvi.org
Vcs-Browser: https://salsa.debian.org/med-team/provean
Vcs-Git: https://salsa.debian.org/med-team/provean.git
Rules-Requires-Root: no
Package: provean
Architecture: any
Depends:
${misc:Depends},
${shlibs:Depends},
Description: Protein Variation Effect Analyzer
PROVEAN (Protein Variation Effect Analyzer) is a software tool which predicts
whether an amino acid substitution or indel has an impact on the biological
function of a protein.
.
PROVEAN is useful for filtering sequence variants to identify nonsynonymous or
indel variants that are predicted to be functionally important.
.
The performance of PROVEAN is comparable to popular tools such as SIFT or
PolyPhen-2.
.
A fast computation approach to obtain pairwise sequence alignment scores
enabled the generation of precomputed PROVEAN predictions for 20 single AA
substitutions and a single AA deletion at every amino acid position of all
protein sequences in human and mouse.
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